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Illegitimate recombination leading to allelic loss and unbalanced translocation in p53-mutated human lymphoblastoid cells. M Honma, L S Zhang, M Hayashi, K Takeshita, Y Nakagawa, N Tanaka and T Sofuni Mol. Cell. Biol. 1997, 17(8):4774. These include: CONTENT ALERTS Receive: RSS Feeds, eTOCs, free email alerts (when new articles cite this article), more» Information about commercial reprint orders: http://journals.asm.org/site/misc/reprints.xhtml To subscribe to to another ASM Journal go to: http://journals.asm.org/site/subscriptions/ Downloaded from http://mcb.asm.org/ on April 26, 2014 by PENN STATE UNIV Updated information and services can be found at: http://mcb.asm.org/content/17/8/4774 MOLECULAR AND CELLULAR BIOLOGY, Aug. 1997, p. 4774–4781 0270-7306/97/$04.0010 Copyright © 1997, American Society for Microbiology Vol. 17, No. 8 Illegitimate Recombination Leading to Allelic Loss and Unbalanced Translocation in p53-Mutated Human Lymphoblastoid Cells MASAMITSU HONMA,1* LI-SHI ZHANG,1† MAKOTO HAYASHI,1 KENJI TAKESHITA,1 YUZUKI NAKAGAWA,2 NORIHO TANAKA,2 AND TOSHIO SOFUNI1 Division of Genetics and Mutagenesis, National Institute of Health Sciences, Setagaya, Tokyo 158,1 and Department of Cell Biology, Hadano Research Institute, Food and Drug Safety Center, Hadano, Kanagawa 257,2 Allelic loss and translocation are critical mutational events in human tumorigenesis. Allelic loss, which is usually identified as loss of heterozygosity (LOH), is frequently observed at tumor suppressor loci in various kinds of human tumors. It is generally thought to result from deletion or mitotic recombination between homologous chromosomes. In this report, we demonstrate that illegitimate (nonhomologous) recombination strongly contributes to the generation of allelic loss in p53-mutated cells. Spontaneous and X-ray-induced LOH mutations at the heterozygous thymidine kinase (tk) gene, which is located on the long arm of chromosome 17, from normal (TK6) and p53-mutated (WTK-1) human lymphoblastoid cells were cytogenetically analyzed by chromosome 17 painting. We observed unbalanced translocations in 53% of LOH mutants spontaneously arising from WTK-1 cells but none spontaneously arising from TK6 cells. We postulate that illegitimate recombination was occurring between nonhomologous chromosomes after DNA replication, leading to allelic loss and unbalanced translocations in p53-mutated WTK-1 cells. X-ray irradiation, which induces DNA double-strand breaks (DSBs), enhanced the generation of unbalanced translocation more efficiently in WTK-1 than in TK6 cells. This observation implicates the wild-type p53 protein in the regulation of homologous recombination and recombinational DNA repair of DSBs and suggests a possible mechanism by which loss of p53 function may cause genomic instability. a genotoxic insult would escape apoptosis and continue to divide, thereby accumulating mutations (19, 25). Inactivation of p53 enhances the gene amplification rate (28), produces structural and numerical chromosome changes (1, 6, 8), and deregulates centrosomal replication, leading to abnormal chromosomal segregation (12), while it does not affect the accumulation of point mutations (37). It is likely that a mutator phenotype associated with p53 inactivation would contribute to gross structural changes such as chromosomal alterations but not small DNA changes such as point mutations (30). Recently, we (17) and Xia et al. (48) characterized a mutator phenotype caused by mutant p53 protein. We compared the mutation frequencies and mutational spectra at the heterozygous thymidine kinase (tk) locus between normal (TK6) and p53-mutated (WTK-1) human lymphoblastoid cells. Both cell lines are derived from the same progenitor cell line, WI-L2, but WTK-1 cells have a homozygous point mutation at codon 237 of the p53 gene, resulting in the overproduction of mutant p53 protein (27, 49). The spontaneous mutation frequency at the tk locus in WTK-1 cells (101.1 3 1026) was 30 times higher than it was in TK6 cells (3.5 3 1026) (17). WTK-1 cells were more resistant to the cytotoxic damage and more sensitive to the mutagenic effect of X rays than were TK6 cells (2, 17). X-ray doses yielding 37% survival in TK6 and WTK-1 cells were 0.8 and 2.0 Gy, respectively. A dose of 2 Gy induced TK-deficient mutants at frequencies of 28 3 1026 in TK6 cells and 2,400 3 1026 in WTK-1 cells. Thus, the WTK-1 cells presented the typical mutator phenotype described above. Interestingly, molecular analysis revealed that WTK-1 cells preferably produced allelic loss (loss of heterozygosity [LOH])type mutations at the tk locus (17, 48). LOH is frequently observed at critical loci, where tumor suppressor genes should be located, in a variety of human cancers, and it is an important Human tumorigenesis is a multistep process in which multiple genetic alterations accumulate, ultimately producing the neoplastic phenotype (11, 29). These genetic alterations vary and include point mutations, gene amplifications, rearrangements, translocations, and deletions of specific genes. It has been hypothesized that genomic instability provides a driving force for the acquisition of these multiple genetic alterations (34, 47). If genomic instability increases the rate at which these alterations occur, then the accumulation of changes and subsequent selection for growth advantage may lead to tumorigenesis. Although the molecular mechanisms leading to increased genomic instability are not fully understood, they could be initiated by alterations in genes involving DNA replication, DNA repair, telomere stability, or chromosome segregation (32). The tumor suppressor protein p53 is involved in controlling genomic stability (23). It appears to mediate certain cellular responses to DNA damage and to be required for G1 arrest and apoptosis (19, 25, 45). It has been hypothesized that G1 arrest allows cells time to repair DNA damage prior to DNA replication, while apoptosis serves to eliminate potentially oncogenic cells (22, 38). This hypothesis has led to the “genome guardian” model of p53 protein (23). One prediction based on this model is that p53-deficient cells would provide a mutator phenotype because cells having unrepaired DNA damage after * Corresponding author. Mailing address: Division of Genetics and Mutagenesis, National Institute of Health Sciences, 1-18-1 Kamiyoga, Setagaya-ku, Tokyo 158, Japan. Phone: 81-3-3700-1141, ext. 434. Fax: 81-3-3700-2348. E-mail: [email protected]. † Present address: School of Public Health, West China University of Medical Sciences, Chengdu 610041, People’s Republic of China. 4774 Downloaded from http://mcb.asm.org/ on April 26, 2014 by PENN STATE UNIV Received 13 February 1997/Returned for modification 11 April 1997/Accepted 29 April 1997 VOL. 17, 1997 ILLEGITIMATE RECOMBINATION IN p53-MUTATED CELLS 4775 MATERIALS AND METHODS Cells and culture conditions. The TK6 and WTK-1 human lymphoblastoid cell lines were kindly provided by J. B. Little, Harvard School of Public Health, Boston, Mass. The cells were grown in RPMI 1640 medium (Gibco-BRL, Life Technology Inc., Grand Island, N.Y.) supplemented with 10% heat-inactivated horse serum (JRH Biosciences, Lenexa, Kans.). Isolation of TK-deficient mutants. Cultures were cleansed of preexisting mutants by treatment with CHAT medium (10 mM deoxycytidine, 200 mM hypoxanthine, 0.1 mM aminopterin, 17.5 mM thymidine) for 2 days. To ensure the isolation of independent mutants, cultures were divided into aliquots immediately after the cleansing procedure and irradiated with X rays. X-ray irradiation was performed with a Toshiba EX-260 GH-1A generator operating at 5 mA with 1-mm Be and 0.8-mm Al filters. The dose rate was 100 rads/min, as determined by a model 500 Vectoreen ionizing chamber. Irradiated and nonirradiated cultures were incubated at 37°C for a week to allow expression of TK-deficient mutants and then were plated into 96-well microtiter plates at 2 3 104 (TK6) or 103 (WTK-1) cells/well in the presence of trifluorothymidine (TFT; 2.0 mg/ml). The TFT-resistant colonies were observed after 13 days, and one colony from each culture was randomly isolated. Cloned tk mutant cells were screened to confirm their phenotype and then Southern analyzed. Southern hybridization analysis. Southern analysis of the tk locus was done as described previously (18). Briefly, DNA was extracted from mutant cells, quantified, and digested with SacI. The digested DNAs were electrophoresed in 0.8% agarose gels, transferred to nylon membranes, and hybridized with 32P-labeled probes. The probe for the tk locus, pTK11, was provided by P. Deininger (Louisiana State University Medical Center, New Orleans, La.). A b-actin probe (Oncor Inc., Gaithersburg, Md.) was used as an internal control for densitometric analysis. Karyotype analysis and SCE. Chromosomes were G banded with Wright’s stain. Karyotype analysis was done as described in reference 31. For sister chromatid exchange (SCE) analysis, the culture was incubated with 20 mM 5-bromodeoxyuridine for 28 h in the dark. Colcemid (0.2 mg/ml) was added 2 h prior to harvesting mitotic cells. Metaphase preparation and SCE analysis were performed as described previously (16). Fifty randomly selected metaphase cells were scored for SCE frequency in each cell line. Chromosome painting analysis. Chromosome painting analysis using fluorescence in situ hybridization was performed as described previously (51). A whole chromosome 17-specific biotinylated probe (Clontech Laboratories Inc., Palo Alto, Calif.) was used. Briefly, chromosomal DNA on slides was denatured with 70% formamide with 23 SSC (13 SSC is 0.15 M NaCl plus 0.015 M sodium citrate) at 70°C for 2 min followed by dehydration through an ethanol series (70, 85, and 100%). The hybridization mixture containing denatured DNA probe (10 ml) was placed on one spot of the chromosome preparation. After overnight hybridization at 37°C, the slides were washed at 45°C with 23 SSC–50% formamide solution three times and then 23 SSC three times. The slides were incubated with fluorescein avidin-DCS (Vector Laboratories Inc., Burlingame, Calif.) solution at 37°C for 30 min and then washed with 43 SSC containing 0.1% Tween 20. For signal amplification, the slides were incubated with biotinylated goat anti-avidin D (Vector Laboratories) at 37°C for 30 min followed by a second fluorescein avidin-DCS treatment. The slides were washed, counterstained with propidium iodide solution, and mounted. For fluorescence microscopy, an Olympus model BX50 equipped with a DM-FI/PI dual-band pass filter was used. At least 50 metaphases for each slide were examined, and the abnormalities recorded. FIG. 1. A model for mechanisms of mutation at the heterozygous tk locus in TK6 and WTK-1 cells and typical results of Southern analysis performed with a human tk cDNA probe (pTK11). SacI polymorphic site exists in the 59-flanking region of the human tk gene. Southern hybridization with the pTK11 probe provided 14.8-kb (B) and 8.4-kb (A) allelic pair bands corresponding to the functional and nonfunctional tk alleles, respectively, in both cell types. X indicates a point mutation leading to disfunctioning TK activity. Point mutations did not change the band pattern, and other intragenic mutations such as deletions and insertions gave migration of the functional 14.8-kb band. LOH was brought about by deletion of the entire functional tk allele or by interallelic recombination. Quantitation of the nonfunctional band (8.4 kb) can allow distinction between the mechanisms. RESULTS LOH mutation at the tk locus. Spontaneously arising and X-ray-induced TK-deficient mutant clones were isolated from parental TK6 and WTK-1 cells by TFT selection. Two distinct phenotypic classes of TK mutants were observed. Normally growing (NG) mutants grew at the same rate as the wild type (doubling time, 13 to 17 h), and slowly growing (SG) mutants grew with a doubling time of .21 h. The difference is thought to be due to a putative growth-regulating gene near the tk locus (3). It is believed that NG mutants result mainly from mutations within the tk locus, while SG mutants result from gross structural changes involving the growth-regulating gene outside the tk locus. We previously reported that the SG mutants contributed to 65% of spontaneous TK mutants from TK6 cells and 80% from WTK-1 cells and that X rays elevated the fraction of SG mutants in both cells (17). The TK-deficient mutants were analyzed by Southern hybridization using the cDNA probe of the human tk gene, pTK11 (Fig. 1). A SacI polymorphic site exists in the 59-flanking region of the human tk gene, and hybridization with the pTK11 probe provides 14.8- and 8.4-kb allelic pair bands, which correspond to the functional and nonfunctional alleles, respectively, in both cells. Changes in this band pattern reflect three classes of mutational mechanisms. The first consists of mutants that show no apparent changes or migration of the functional 14.8-kb band, which presumably result from point mutations, deletions, or insertions within the functional tk gene. The other two classes are LOH mutations that become either hemizygous or homozygous for the nonfunctional allele; each results from a different mechanism. Hemizygous LOH probably results from deletion of the entire allele, while homozygous LOH is produced through mitotic recombination between homologous alleles. They can be distinguished by Downloaded from http://mcb.asm.org/ on April 26, 2014 by PENN STATE UNIV mutational event in multistep human tumorigenesis (24). Preferable induction of LOH mutations in p53-mutated cells may help to explain the sequential accumulation of genetic changes involving LOH during multistep tumorigenesis after p53 mutate. In this study, to investigate the mechanism of preferable induction of LOH in p53-mutated cells, we analyzed LOH mutations at tk loci in TK6 and WTK-1 cells at the cytogenetic level. Although LOH is generally thought to result from deletions or mitotic recombination between homologous chromosomes, we demonstrated that illegitimate (nonhomologous) recombination is a major mechanism causing LOH in p53mutated cells; it also leads to an unbalanced translocation. Because illegitimate recombination was induced by X-ray irradiation, an inducer of double-strand breaks (DSBs), wild-type p53 may participate in the regulation of recombinational DNA repair of such breaks. We propose model mechanism for eliciting LOH and the rule of p53 in maintaining genomic stability. 4776 HONMA ET AL. MOL. CELL. BIOL. TABLE 1. Chromosome 17 painting analysis of LOH mutants at the tk locus of TK6 cells Type of cell Normal Polyploid 117 NG Hetero 100 100 0 TKNG1 TKNG13 TKNG29 TKNG14 TKNG26 TKSG42 TKSG43 TKSG56 TKSG3 TKSG4 TKSG5 TKSG6 TKSG61 0/13 (0) NG NG NG NG NG SG SG SG SG SG SG SG SG Hemi Hemi Hemi Homo Homo Hemi Hemi Hemi Homo Homo Homo Homo Homo 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 TXNG4 TXNG5 TXNG6 TXSG14 TXSG19 TXSG20 TXSG33 TXSG15 TXSG21 TXSG22 TXSG28 2/11 (18) NG NG NG SG SG SG SG SG SG SG SG Hemi Hemi Hemi Hemi Hemi Hemi Hemi Homo Homo Homo Homo 50 50 50 50 50 50 50 50 50 50 50 50 50 50 0 50 50 50 50 50 50 0 Clone Frequency of rearranged clones (%) X-ray induced Frequency of rearranged clones (%) a b Translocationb I II III 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 11 0 0 0 4 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 Determined by densitometric analysis of nonfunctional 8.4-kb band. Hemi, hemizygous; Homo, homozygous. I, 217, der(17)t(17;?); II, der(17)t(17;?); III, others (complicated types). densitometric analysis. The intensity of the nonfunctional 8.4-kb band was measured, and the relative ratio of its intensity was normalized to an internal control DNA amount by stripping and rehybridizing the same filter with b-actin cDNA (data not shown). If the normalized intensity was more than 1.5 times that of the wild-type allele, which corresponds to about two copies of the tk gene, the LOH mutant was classified as homozygous (Table 1). We previously reported the mutational spectra of TK mutants from TK6 and WTK-1 cells (17). Almost all TK mutants spontaneously arising and induced by X-rays in WTK-1 cells contained homozygous LOH mutations, while a considerable portion of TK mutants in TK6 cells contained hemizygous LOH mutations and point mutations. These findings indicate that WTK-1 cells were prone to LOH mutations, presumably via a recombinational process. As a next step, to investigate the mechanism preferably generating LOH mutations in WTK-1 cells, some LOH mutants were examined at the cytogenetic level by using chromosome painting analysis. Karyotype of TK6 and WTK-1 cells. As an initial investigation, we analyzed the karyotype of the parental TK6 and WTK-1 cells from which the TK-deficient mutants derived (data not shown). A representative karyotype of TK6 cells was 47, XY, 131, t(14;?), t(21;?). These karyotypic features are essentially identical with those found in previous analyses (15, 21). On the other hand, WTK-1 commonly showed 47, XY, 131, t(21;?), 142, del(1)(pter-q42), t(12;15), 51, but some metaphases contained other abnormality including t(X;10), del(3), del(8), t(3;10), t(1;8), or t(2;15). In addition, approximately 8% of metaphases in WTK-1 cells showed polyploid. The karyotype of WTK-1 cells was more heterogeneous and unstable than that of the TK6 cells. Chromosome 17 painting analysis revealed that there were no structural abnormalities involving chromosome 17 in either cell line (Fig. 2a and b), while a chromosome 17 numerical change (trisomy of chromosome 17) was observed only in WTK-1 cells at low frequency (2%). Analysis of spontaneous LOH mutants. Thirteen spontaneous LOH TK6 cells (five NG and eight SG mutants) were chosen for chromosome 17 painting analysis. Densitometric analysis revealed that two NG and five SG mutants were homozygous at the tk locus. No apparent abnormalities, including chromosomal deletions and translocations, with respect to the parental TK6 cells were observed in any 13 LOH mutants (Table 1). Similarly, we analyzed 17 LOH mutant WTK-1 cells (6 NG and 11 SG mutants), among which 4 NG and 10 SG mutants were homozygous mutants. Interestingly, we observed a translocation involving chromosome 17 in every metaphase for 9 of 11 SG mutants (Table 2). The translocations were interpreted as two types of unbalanced translocations. The first type was der(17) t(17q;?), which lost genetic material on the distal end of the long arm, including the tk locus, and was replaced by another chromosome (type I [Fig. 2c]). The second Downloaded from http://mcb.asm.org/ on April 26, 2014 by PENN STATE UNIV No. of metaphases analyzed Parent Mutants Spontaneous No. of changes of chromosome 17 tk locus by Southern analysisa Type of growth VOL. 17, 1997 ILLEGITIMATE RECOMBINATION IN p53-MUTATED CELLS 4777 Downloaded from http://mcb.asm.org/ on April 26, 2014 by PENN STATE UNIV FIG. 2. Examples of chromosome 17 painting in TK6 and WTK-1 cells following hybridization of a whole chromosome 17 DNA probe with metaphase chromosomes. The labeled chromosome 17s appear yellow, and other chromosomes are red from the counterstain propidium iodide. Translocated chromosomes are indicated by arrows. (a) Metaphase of parental TK6 cells; (b) metaphase of parental WTK-1 cells; (c) metaphase of clone WTSG29, type I [217, der(17)t(17;?)]; (d) metaphase of clone WTSG28, type II [der(17)t(17;?)]; (e) metaphase of clone WXSG30, type III (complicated); (f) metaphase of clone WXSG29, type III (complicated). 4778 HONMA ET AL. MOL. CELL. BIOL. TABLE 2. Chromosome 17 painting analysis of LOH mutants at the tk locus of WTK-1 cellsa Type of cell Parent Mutant Spontaneous X-ray induced Frequency of rearranged clones (%) a No. of metaphases analyzed Normal Polyploid 117 NG Hetero 100 90 8 WTNG38 WTNG41 WTNG1 WTNG2 WTNG3 WTNG4 WTSG12 WTSG14 WTSG17 WTSG26 WTSG28 WTSG29 WTSG56 WTSG62 WTSG64 WTSG70 WTSG75 9/17 (53) NG NG NG NG NG NG SG SG SG SG SG SG SG SG SG SG SG Hemi Hemi Homo Homo Homo Homo Hemi Homo Homo Homo Homo Homo Homo Homo Homo Homo Homo 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 50 29 41 45 45 41 47 0 47 44 0 0 0 0 0 0 0 0 WXNG1 WXNG5 WXNG9 WXNG10 WXNG2 WXSG21 WXSG29 WXSG30 WXSG31 WXSG41 WXSG48 9/11 (82) NG NG NG NG NG SG SG SG SG SG SG Homo Homo Homo Homo Homo Homo Homo Homo Homo Homo Homo 50 50 50 50 50 50 50 50 50 50 50 45 0 0 46 0 0 0 0 0 0 0 Clone Translocationb I II III 2 0 0 0 19 9 5 5 7 3 4 3 6 8 4 7 8 12 5 4 14 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 22 1 22 22 14 3 8 16 0 0 0 0 0 0 25 0 0 20 45 21 20 24 42 38 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 4 4 11 4 9 3 2 7 10 0 0 0 0 0 0 0 0 0 0 0 0 30 14 0 19 0 0 9 26 15 10 0 15 32 0 20 0 0 28 22 28 30 0 0 0 0 0 46 41 10 0 0 0 For details, see the footnotes to Table 1. possessed another chromosome 17 in addition to the translocation, resulting in partial trisomy of chromosome 17 (type II [Fig. 2d]). Every translocated chromosome 17 possessed its centromere region. These two types of translocations were heterogeneous, observed in the metaphases of the mutants as mosaics. Polyploid and trisomy of chromosome 17 were observed in some LOH mutants as well as in parental WTK-1 cells (data not shown). These numerical changes, however, seemed independent of the translocational events. Analysis of X-ray-induced LOH mutants. We also investigated 11 X-ray-induced TK6 LOH (2 Gy) and 11 WTK-1 (4 Gy) mutants. The doses provided almost equivalent cytotoxic damage to both cell types (2 to 5% relative survival). Two TK6 SG mutants showed an unbalanced translocation that was similar to one observed in spontaneous WTK-1 LOH mutants. We also detected an unbalanced translocation in two of four NG mutants and all of the seven SG mutants of WTK-1. Some revealed unusual chromosomal changes that were difficult to categorize, although most changes were type I or II translocations. Clone WXSG21 and WXSG30 had some metaphases that showed two translocated chromosomes 17 with a normal chromosome 17 (Fig. 2e). Clone WXSG29 had additional chromosome 17 numerical changes with type I and type II translocations in some metaphases (Fig. 2f). These changes were categorized as type III (others). The results of chromosome painting analysis and the frequencies of LOH mutants showing the translocations are shown in Tables 1 and 2. SCE. The frequencies (means 6 standard deviations) of spontaneous SCE were 2.36 6 1.32/cell (0.052/chromosome) in TK6 cells and 2.16 6 1.49/cell (0.047/chromosome) in WTK-1 cells. There was no statistically significant difference in SCE frequency between cell lines. DISCUSSION Allelic loss, which is observed as LOH at tumor suppressor gene loci in a variety of human cancers, is an important mutational event in tumorigenesis. Although LOH could be due to chromosome loss, chromosome loss followed by duplication (or aberrant segregation), deletion of an entire allele, or mitotic recombination between homologous alleles, the last two appear to be the major mechanisms associated with loss of tumor suppressor functions (24, 39). We previously reported that p53-mutated WTK-1 cells exhibit a mutator phenotype and preferably produce LOH-type gene mutations, presumably because of their abnormally high recombinational activity (17). Xia et al. (48) also demonstrated hyperrecombinational activity in WTK-1 cells that increased Downloaded from http://mcb.asm.org/ on April 26, 2014 by PENN STATE UNIV Frequency of rearranged clones (%) No. of changes of chromosome 17 tk locus by Southern analysisa Type of growth VOL. 17, 1997 ILLEGITIMATE RECOMBINATION IN p53-MUTATED CELLS FIG. 3. Model for mechanisms eliciting loss of heterozygosity via homologous recombination, nonhomologous recombination, and nonhomologous recombination followed by mitotic nondisjunction. Nonhomologous recombination can lead to unbalanced translocation. 11 (which harbors the mouse tk gene). Recently the L5178Y cell line was shown to have a point mutation at codon 170 in the p53 gene and to overproduce mutant p53 protein (42). This finding supports the idea that overproducing mutant p53 protein contributes to a high frequency of unbalanced translocations. It is possible that overproduction of p53 protein enhances recombinational activity and that the mutant form of the protein causes low recombination fidelity, leading to recombination between nonhomologous DNAs. This quantitative and qualitative abnormality of p53 protein may disorder the recombinational machinery in mammalian cells, resulting in a high frequency of LOH mutations and unbalanced translocations. Thus, p53 may directly regulate processes of homologous recombination in mammalian cells. p53 may be also responsible for monitoring for homologous recombination. It is possible that if nonhomologous recombination as well as homologous recombination usually occur in mammalian cells, p53 can detect and eliminate abnormal cells which have undergone nonhomologous recombination. Downloaded from http://mcb.asm.org/ on April 26, 2014 by PENN STATE UNIV the frequency of plasmid-based intermolecular homologous recombinations. These findings suggest that the mutant p53 protein might enhance or deregulate the recombinational machinery, leading to genomic instability. It is possible, however, that nonhomologous recombinations or other complicated DNA rearrangements were associated with LOH in WTK-1 cells, because the mutant p53 protein might bring about inaccurate homologous recombination or other types of genomic instability. The chromosomal abnormality observed in p53deficient and -mutated cells may be due to deregulated recombinational machinery (28, 30, 50). We therefore decided to analyze LOH mutants at the cytogenetic level by using a chromosome painting technique. According to the mechanisms of LOH depicted in Fig. 1, hemizygous LOH mutations by deletion should show a shortened chromosome 17, and homozygous LOH mutations caused by homologous recombination should show no structural alteration. Indeed, we observed no structural or numerical change in chromosome 17 in any homozygous LOH mutants arising spontaneously from TK6 cells, consistent with the hypothesis that the homozygous LOH mutants resulted from mitotic recombinations between homologous chromosomes. We also found no abnormality in any hemizygous LOH mutants arising spontaneously from TK6 cells, suggesting that deletional events occurring in SG mutants, as well as in NG mutants, are limited to a relatively small region that cannot be detected by usual cytogenetic analysis (presumably less than 10 Mb). Hence, spontaneous LOH mutations in TK6 cells were probably generated through models described in Fig. 1. On the other hand, we unexpectedly found unbalanced translocations in 53% (9 of 17) of spontaneous LOH mutants from WTK-1 cells (Fig. 2; Table 2). The translocated chromosome 17 lost the distal end of the long arm that includes the tk locus and is fused to an unidentified chromosome. Because all spontaneous mutants showing translocations were SG mutants, the putative gene associated with cell growth control located distal to the tk locus may be lost by the unbalanced translocation. We postulated that the unbalanced translocation resulted from illegitimate (nonhomologous) recombination between chromosome 17 and another chromosome. Figure 3 shows a model for mechanisms eliciting LOH mutation via homologous and nonhomologous recombinational processes. According to this model, a clone losing a functional tk allele by nonhomologous recombination becomes resistant to TFT with an unbalanced translocation. In addition to the unbalanced translocation, we found partial trisomy of chromosome 17 in some metaphases of the mutants (type II). Because these numerical chromosome changes are not clonal in the mutants, they must not be directly associated with tk gene mutation. Actually, this phenomenon was observed some parental WTK-1 cells (Table 2). It is likely that chromosome 17 trisomy found in type II translocations resulted from a gain of chromosome 17 after the translocational event, because loss of p53 function increases the probability of generating aneuploidy through mitotic nondisjunction (aberrant segregation) (1, 12). This provides an explanation for the densitometric data. LOH WTK-1 mutants showing translocations were identified as homozygous by densitometric analysis because of an increased copy number of the nonfunctional tk allele. Chromosome painting analysis, however, demonstrated that the increased copy number was a result of mitotic nondisjunction following nonhomologous recombination, not of homologous recombination. We observed a similar phenomenon in a study of the tk gene mutation in L5178Y mouse lymphoma cells (51). 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Nature 358:15–16. 24. Lasko, D., and W. Cavenee. 1991. Loss of constitutional heterozygosity in Downloaded from http://mcb.asm.org/ on April 26, 2014 by PENN STATE UNIV Because homologous recombination is stimulated by ionizing irradiation in yeast and mammalian cells (5, 41), it contributes to the repair of DNA damages, especially DSBs, which are potentially recombinogenic and can result in chromosome translocations, deletions, or amplifications (28, 50). Ionizing irradiation also leads to the accumulation of p53 protein (19, 27, 30). It is likely that some of the DSBs induced by ionizing irradiation are stabilized by binding to p53 protein and repaired by homologous recombination (3, 20), although the majority are repaired by rejoining of the broken ends via another repair process involving Ku proteins (36). We observed unbalanced translocations in 18% of X-ray-induced LOH mutant TK6 cells. These mutants might have been induced by DSBs and escaped from repair. X-ray irradiation strongly enhanced mutant fractions involving unbalanced translocation in WTK-1 cells, supporting the idea that DSBs uncaptured or captured by mutant p53 protein are not repaired appropriately and cause translocations through nonhomologous recombination. Because homologous recombination and recombinational DNA repair processes in mammalian cells are poorly understood, it is not clear how p53 protein regulates the recombinational machinery. Considerable recent evidence provides three possibilities. First, p53 protein can catalyze renaturation of complementary single- and double-stranded DNA and promote strand exchange between them (3, 35). Thus, the protein may directly participate in promoting or regulating the renaturation and strand transfer of the damaged DNA. Second, it interacts with human RAD51 protein (HsRad51) and its prokaryotic homolog RecA, which are key factors in homologous recombination and catalyze ATP-dependent strand transfer exchanges between homologous DNA molecules (4, 26, 40, 43). Sturzbecher et al. (43) demonstrated a specific interaction between p53 protein and HsRad51 or Escherichia coli RecA protein. They found that wild-type but not mutant p53 can interact with these proteins in vivo and can inhibit RecAcatalyzed strand exchange reactions and ATPase activity. p53 may participate in homologous recombination by regulating the function of HsRad51. Third, p53 protein exhibits 39-to-59 exonuclease activity (33). Because DSB repair is thought to require DNA helicase such as the Ku autoantigen and exonuclease (36, 44), the exonuclease activity of p53 might be involved in the initiation of recombinational DNA repair of DSBs. Hyperrecombinational activity was also detected in cells from a patient with Bloom’s syndrome (BS). BS is an autosomal recessive disorder associated with a high cancer incidence (13). BS cells exhibit increased chromosomal instability (14), SCE (7), and mutations at the hprt locus (46). Ellis et al. (10) observed that cells with a low SCE rate were spontaneously generated from compound heterozygote BS patients. It was thought that a high SCE rate in a precursor stem cell in these compound BS gene (BLM) heterozygotes gave rise to progeny cells having the wild-type gene and phenotypically a low SCE rate through interallelic recombination. This observation implies that SCE and interallelic recombinations leading to LOH mutations are regulated by a common mechanism. The rate of spontaneous SCE in WTK-1 cells, however, was not different from the rate in TK6 cells (see Results), indicating that p53 function is not directly associated with spontaneous SCE. SCE may be regulated by another recombinational mechanism associated with helicase activity (9). 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