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CHAPTER 5 Post to: /0176504311-a1/Development/8_second pass/ Genetics/Ch5 Mendelian Genetics— patterns of Inheritance How Do Genes Get passed on from parent to Child? KEY CONCEPTS After completing this chapter you will be able to • describe the early experiments of Gregor Mendel and relate his conclusions to modern genetic theory • solve monohybrid and dihybrid cross problems using Punnett squares, and use probabilities to determine the expected phenotypes and genotypes in the offspring • explainandprovideexamples of dominance, incomplete dominance, and multiple alleles • drawandfollowapedigreechart in order to track a specific allele through many generations • describegeneticdisordersthat are caused or influenced by specific genes • considerthesocialandethical implications associated with genetic testing You have your mother’s eyes, your father’s curly hair, and your grandmother’s disposition. How are characteristics passed on from one generation to the next? Why do characteristics disappear from one generation and then reappear in the next? Can you predict which characteristics will be inherited? Would you like to be able to predict the characteristics you will pass on to your children, or find out which ones have been passed on to you from your parents but have not surfaced yet? Researchers in modern genetics laboratories now study how specific characteristics are passed on from parent to offspring. However, humans have studied the characteristics of plants and animals ever since the beginning of organized agriculture. Early farmers realized that selective breeding resulted in a better food supply. These early farmers did not know about DNA or genes. They practised genetic selection by choosing to breed plants and animals based on characteristics that were important to them. Today we have a better understanding of how genes are passed from parent to child. Geneticists are most interested in pinpointing the exact mechanism by which a gene is passed on to offspring, especially in the case of genetic diseases. For example, two parents who do not have cystic fibrosis, a genetic respiratory disease, may have a child who is born with cystic fibrosis. Where did the cystic fibrosis gene come from—both parents, or just one? Will all the children of these parents have cystic fibrosis, or just some? By understanding how genetic disease genes are passed on, geneticists are able to answer such questions. Once such questions are answered, researchers can work on treatment and prevention. In this chapter you will investigate how characteristics are passed on from parent to child. You will find out how the rules of probability govern the offspring’s characteristics. You will explore the idea of being able to determine which genes you carry, and the social and ethical consequences of finding out. Finally, you will see how certain characteristics may be valuable to one individual and detrimental to another. starting pOInTS Answer the following questions using your current knowledge. You will have a chance to revisit these questions later, applying concepts and skills from the chapter. 1. How do you think genetic information gets passed on from generation to generation? 2. How might an understanding of genetic processes and 2 the inheritance of biological characteristics benefit individuals and society? 3. Why is there so much variation in the human population with respect to what humans look like? 4. How does society benefit from the screening of harmful genes? Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 2 posted to 2nd pass folder 9-1-10 nel 8/31/10 4:34:19 PM FPO All "tasters" detect a quite bitter flavour. No taster perceives the PTC as only "slightly" bitter. Therefore, I have removed the references to "super tasters" - ok to mention in the TR but there is really way for a student to know if they Mini now Investigation are a taster or super taster. Ie how pTC Tasting—“I Don’t Like my vegetables” "bad" is "bad"? I for example am a Skills: taster Predicting,-Performing, Analyzing Evaluating the PTC tastes disgusting to me - but I have no way of knowing if it Phenylcarbamide (PTC) is not naturally found in foods, but even worse to others don't severaltastes related compounds are. Whether or not so you Ican taste know if I am a super taster or not. PTC or any of its related chemicals in food depends on the genes that you inherited from your parents. If you are able to taste PTC, there is a good chance that you are a non-smoker and do not like Brussels sprouts grapefruit juice, or green tea. Equipment and Materials: PTC test paper 1. Predict if you are able to taste PTC using knowledge of your dietary habits. Obtain 2. Take a strip of PTC test paper out of the stock bottle. 3. Place the strip on the tip of your tongue for 5 seconds. Then remove the strip. 4. Record your taste result: no taste, slightly bitter taste, extremely bitter taste 5. Pool your data with those of the rest of the class. C05-P13-OB11USB C05-P01-OB11USB SKILLS HANDBOOK A. Report the class data. How many of your classmates taste PTC? How many of your classmates cannot taste PTC? T/I B. What percentage of students in the class were nontasters (recorded no taste)? What percentage of students in the class were super-tasters (recorded an extreme taste)? C. Which group is larger: super-tasters or non-tasters? Is one group much larger than the other? Extrapolate your results to the general population by comparing the percentages. T/I D. Is there a correlation between your dietary habits and whether or not you could taste PTC? Explain your thinking. T/I A E. Share your answer to E with a partner. Do your partner’s dietary habits correlate with his or her ability to taste PTC? T/I A Introduction nel 7380_Ch05_pp002-045.indd 3 T/k posted to 2nd pass folder 9-1-10 3 8/31/10 4:34:23 PM 5.1 trait a particular version of a characteristic that is inherited, such as hair colour or blood type C05-P02-OB11USB Mendelian Inheritance You are likely familiar with the notion of resemblance—two siblings who look similar either simple change to "simple to each other or to delete their parents. Youor probably resemble one orbut moreelegant" of your family members. This is because you have many genes in common. When we talk about resemblance, we are"simple" usually referring to atraits. A trait is a We particular of an I think alone is bit insulting. bred version many hundreds inherited characteristic, such as a person’s eye colour or the shape of a leaf. People of plants and very carefully observed and documented have always recognized that traits are hereditary, even though they did not underthousands of individual - not really a advances simple task. stand the mechanism of inheritance. Overtraits the last few centuries, in genetics have changed the way we understand inheritance. We owe much of our understanding of genetics to the simple experiments conducted by Gregor Mendel in the nineteenth century (Figure 1). At that time, some scientists thought that traits from each parent were blended in the offspring, similar to mixing red and white paints to make pink paint. However, offspring sometimes exhibited a trait identical to that of one parent rather than being in between those of both parents. To explore patterns of inheritance, Mendel crossbred thousands of plants in his garden and carefully recorded the offsprings’ traits. Mendel’s Pea Plants Figure 1 Gregor Johann Mendel (1822–1884), an inquisitive Austrian monk, is known as the “father of genetics.” true-breeding organism an organism that produces offspring that are genetically identical for one or more traits when selfpollinated or when crossed with another true-breeding organism for the same traits hybrid the offspring of two different truebreeding plants Mendel conducted experiments with the garden pea, Pisum sativum. He chose the garden pea because it reproduces quickly and, more importantly, he could control which parents produced offspring. The sex organs of a plant are in its flowers. Pea flowers have both male and female reproductive organs. Garden peas are both selffertilizing and cross-fertilizing. In other words, the pea flower can self-pollinate (mate with itself) or pollinate others. Some garden peas are true-breeding plants. This means that, when self-pollinated or crossed with a similar true-breeding plant, they will always produce offspring that have the same trait. For example, if a true-breeding pea plant with purple flowers is selfpollinated, or crossed with another true-breeding plant with purple flowers, all offspring plants will have purple flowers. The offself-pollinating spring of two different true-breeding plants is called a hybrid. By preventing pea plants from, Mendel was able to cross-breed plants with specific traits. Mendel removed the male reproductive organs, the anthers, from the flowers of true-breeding plants. He then pollinated true-breeding plants with pollen from other true-breeding plants (Figure 2). Since the parent plants were true breeding but had different traits, the offsprings’ traits would represent the hybrid condition. <something's missing here?> C05-F01-OB11USB LEARNING TIP Characteristic or Trait Do not confuse the terms “characteristic” and “trait.” Traits represent the variation within a characteristic. For example, height is a characteristic, while short and tall are traits; sight is a characteristic, while normal vision, near-sightedness, and far-sightedness are traits. a) stigma carpel not sure if this is too late - but the second flower b) shouldnot have c)anthers - these d) Pollen been removed early on. would have pollen anthers Figure 2 Pollen grains form in the anthers. The egg cell is foundhad in the carpel. Mendel brushed pollen from one plant (a) onto the stigma of a second plant (b). He cut the anthers from the second plant so it could not self-pollinate. He then planted the resulting seeds (c) in order to observe the characteristics of the resulting offspring (d). 4 Chapter 5 • Mendelian Genetics—Patterns of Inheritance NEL C05-F01-OB11USB 7380_Ch05_pp002-045.indd 4 posted to 2nd pass folder 9-1-10 9/1/10 11:02:30 AM Another significant feature of the pea plant is that it has several observable characteristics, each of which is expressed in one of two ways. For example, the shape of the pea may be smooth or wrinkled; the colour of the seeds may be yellow or green. Mendel performed his experiments on seven hereditary characteristics of the pea plant: flower colour, flower position, stem length, seed shape, seed colour, pod shape, and pod colour (Table 1). Mendel chose characteristics that always occurred in one of only two ways so that he could distinguish between these traits and thus interpret his data easily. Mendel’s Experiments In genetics, the breeding of two organisms with different traits is called a cross. In order to track the inheritance of a single trait, Mendel crossed true-breeding plants that differed in only one characteristic, such as flower colour. These plants were his parental generation, or P generation. The hybrid offspring of cross were the filial generation, or F1 generation, (from the Latin word for son, filius). The F1 generation differed from each other in only one characteristic, making them monohybrids. This type of cross, which scientists use to study the inheritance of a single trait from two true-breeding parents, is called a monohybrid cross. Figure 3 shows an example of one of Mendel’s monohybrid crosses. Mendel crossed a true-breeding pea plant with purple flowers with a true-breeding pea plant with white flowers. He wondered whether the hybrid F1 generation would have pink (or “blended”) flowers, as some scientists might have predicted. Mendel observed, surprisingly, that all the F1 plants had purple flowers rather than flowers that were a blend of the two traits in the P generation. It was as though the trait for white flowers had disappeared! Flower colour C05-F02-OB11USB F1 generation P generation Table 1 Seven Characteristics of Pea Plants Characteristic Traits flower colour purple/white flower position axial (along stems)/terminal (at tips) stem length tall/dwarf seed shape smooth/wrinkled seed colour yellow/green pod shape inflated/ constricted pod colour green/yellow cross the successful mating of two organisms from distinct genetic lines P generation parent plants used in a cross F1 generation offspring of a P-generation cross monohybrid the offspring of two different true-breeding plants that differ in only one characteristic monohybrid cross a cross designed to study the inheritance of only one trait × purple white purple Figure 3 All the offspring of a monohybrid cross between purple true-breeding pea plants and white true-breeding pea plants have purple flowers. When Mendel allowed the F1 generation of plants to self-pollinate, the resulting F2 generation included both plants with purple flowers and plants with white flowers. This meant that the trait for white flowers had not disappeared but had somehow been masked. What Mendel did next was fundamentally important in his pursuit of scientific knowledge. He recorded the numbers of the F2 generation plants according to their traits. He then calculated the ratios of the traits for each characteristic. Mendel found a pattern. In each F1 generation, only one of the two traits was present. In the F2 generation, both traits were present—the missing trait had reappeared. This disproved the “blending” theory. The traits in the F2 generation were repeatedly expressed in a ratio of approximately 3:1. F2 generation offspring of an F1-generation cross C05-F02-OB11USB 5.1 Mendelian Inheritance NEL 7380_Ch05_pp002-045.indd 5 posted to 2nd pass folder 9-1-10 5 9/1/10 11:02:31 AM The results of Mendel’s careful analysis are summarized in Figure 4. C05-F04-OB11USB Characteristics P F1 F2 seed shape round × wrinkled all round 5474 round 1850 wrinkled 2.96:1 seed colour yellow × green all yellow 6022 yellow 2001 green 3.01:1 299 constricted 2.95:1 pod shape inflated × constricted all inflated pod colour green × yellow all green 428 green 152 yellow 2.82:1 flower colour purple × white all purple 705 purple 224 white 3.15:1 flower position axial × terminal all axial 651 axial 207 terminal 3.14:1 tall × dwarf all tall 787 tall 277 dwarf 2.84:1 stem length 882 inflated Ratio Figure 4 Mendel’s crosses with seven different characteristics in peas, including his results and the calculated ratios of the offspring web Link Mendel’s Life Mendel lived a fascinating life. To find out more about Mendel’s life and work, g o t o n e l so n sci e nce Mendel’s Conclusions: The First Law of Mendelian Inheritance Mendel concluded that traits must be C05-F04-OB11USB passed on by discrete heredity units, which he called factors. Although these factors might not be expressed in an individual, they can still be passed on. Mendel called the factor that was expressed in all the F1 generations the “dominant factor.” The factor that remained hidden but was expressed in the F2 generation is the “recessive factor.” In addition, once Mendel had compiled all the data and realized that there was a definite pattern, he recognized that the 3:1 ratio was an important clue. Why would a trait present in the parent generation not be expressed in the offspring (F1) but then reappear in 25 % of the second generation (F2)? Mendel had noticed a pattern in the data. Now, he had to try to explain it. Mendel’s next two conclusions form the law of segregation: law of segregation a scientific law stating that (1) organisms inherit two copies of genes, one from each parent, Bio 11 and (2) organismsSci donate only one copy of ISBN each gene to their gametes because the #0176504311 genes separate during gamete formation Figure Number Artist Ann Sandersonof chromosomes. In addition, Mendel recognized that traits are inherited discovery Pass each 2nd Passparent. Today, these distinct units are called genes, and we know that they are • For each characteristic (such as flower colour), an organism carries two factorsI(genes): from each parent. would one reword so that we don't use the word • Parent gene organisms donateimmediately only one copy before of each gene in their for unit, saying wegametes. call During meiosis, the two copies of each gene separate, or segregate. the units genes. C05-F04-OB11USB Using his data, Mendel was able to predict the results of meiosis long before the in distinct units and that an organism inherits two copies of each gene—one from Approved Not Approved passed on from one generation to the next. Typically, each gene determines a specific characteristic that will appear in the individual, such as seed colour or pod shape. 6 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 6 posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:34:28 PM Alleles: Alternate Forms of a Gene Recall from Chapter 4 that each gene has a locus, or position, on a chromosome. Most genes exist in at least two forms. For example, in Mendel’s experiments, there were two different forms of the gene for flower colour, two different forms of the gene for stem length, and so on. Each form of a gene is called an allele. Your cells have two alleles for each gene. One allele for the gene is inherited on a chromosome from one parent, and the other allele is inherited on the homologous chromosome from the other parent. Each parent passes on one copy of each chromosome to the offspring via gametes. Gametes are formed during meiosis. As you learned in Chapter 4, during anaphase of meiosis I (Section 4.2 Figure 4), homologous chromosomes separate. This ensures that each gamete receives only one chromosome from the pair and therefore receives only one allele for each gene. In other words, only one allele from each parent is passed to the offspring. Which of the two alleles will be passed on is random and purely a matter of chance. The two alleles that an individual inherits from its parents for a particular characteristic may be the same, or they may be different. Different allele combinations can result in different traits for that characteristic. If the two alleles for a particular gene are the same, the individual is homozygous for that allele. This would be the case, for example, if both flowers-colour alleles coded for white flowers. If, however, one allele coded for white flowers while the other coded for purple flowers, the alleles would be heterozygous. The term heterozygous describes an organism that has two different alleles for a gene. of that an individual has is its genotype. An individual’s genotype The set of alleles includes all forms an individual’s genes, even if some of these genes remain “hidden.” In contrast, the traits of an individual make up its phenotype. The alleles that are expressed determine an individual’s phenotype. Dominant and Recessive Alleles In heterozygous individuals, which allele is expressed? As Mendel observed in his experiments, some alleles were expressed while others remained hidden. A dominant allele is an allele that expresses its phenotypic effect whenever it is present in the individual. A recessive allele is expressed only when both alleles are of the recessive form. In Mendel’s experiments, the allele for purple flowers was dominant over the allele for white flowers. This explains why, when Mendel crossed two true-breeding plants with different alleles, all the flowers were the same colour. The resulting F1 generation expressed only one allele. Geneticists use letters to represent alleles. Uppercase letters represent dominant alleles; lowercase letters represent recessive alleles. An individual’s genotype is expressed with one letter for each allele. As an example, the gene for plant height results in tall plants or dwarf (short) plants. The allele for tall plants is dominant and represented by the capital letter T. The allele for dwarf plants is recessive and assigned a lower case t. Possible genotypes for the plant are homozygous dominant (TT), homozygous recessive (tt), or heterozygous (Tt). However, there are only two possible phenotypes: tall and short (Figure 5). allele a specific form of a gene homozygous describes an individual that carries two of the same alleles for a given characteristic heterozygous describes an individual that carries two different alleles for a given characteristic genotype the genetic makeup of an individual phenotype an individual’s outward appearance with respect to a specific characteristic dominant allele the allele that, if present, is always expressed recessive allele the allele that is expressed only if it is not in the presence of the dominant allele, i.e., if the individual is homozygous for the recessive allele C05-F05-OB11USB INFLUENCE OF ALLELES ON PHENOTYPE It is not possible to determine whether the genotype of a tall pea plant is TT or Tt just by looking at it. Why do two different genotypes result in the same phenotype? Whenever an individual has at least one copy of the dominant allele, that allele is expressed. All tall plants are either TT or Tt. It is the T allele that makes them tall. Only plants that have no T allele—only tt plants—show the dwarf phenotype. In heterozygous plants, the T allele “dominates” the t allele. TT Tt tt Figure 5 Heterozygous plants inherit one T allele and one t allele, and are tall. 5.1 Mendelian Inheritance NEL 7 C05-F05-OB11USB 7380_Ch05_pp002-045.indd 7 posted to 2nd pass folder 9-1-10 9/1/10 11:02:33 AM LEARNING TIP Dominance In genetics, dominance refers only to which gene is expressed in an organism. It does not mean that the allele is stronger, better, or more common than the recessive allele. What makes an allele dominant or recessive? One common situation occurs when the dominant allele codes for a working protein, while the recessive allele does not. For example, melanin is a pigment responsible for colour in our eyes, skin, and hair. Humans have two forms of the gene for the production of melanin. One form of the gene—call it allele M—provides instructions for the production of melanin. The other form—allele m—is unable to code for the production of melanin. Only a single copy of the M allele (like a single set of instructions) is needed to produce melanin. Individuals who produce melanin have normal eye, skin, and hair colour. An Mm individual can make melanin just as easily as an MM individual, but mm individuals are unable to produce melanin. These individuals have the condition known as albinism. In this case the M allele is said to be dominant over the m allele, because the normal colour phenotype is expressed whenever an M allele is present, and the albino phenotype is expressed only in mm individuals. You will learn more about the relationships between alleles and their resulting phenotypes in Section 5.2. Predicting the Inheritance of Alleles Punnett square a diagram that summarizes every possible combination of each allele from each parent; a tool for determining the probability of a single offspring having a particular genotype Geneticists use monohybrid crosses to study inheritance. They cross two truebreeding parents that differ in a single trait. In other words, the study involves the inheritance of two alleles for a single characteristic. Mendel’s experiments consisted of many crosses. As a result of these experiments, he developed a way of mathematically predicting the proportions of phenotypes in the offspring. Biologists now use Punnett squares to copy Mendel’s analysis. A Punnett square is a diagram used to predict the proportions of genotypes in the offspring resulting from a cross between two individuals (Figure 6). parent 1 alieles P p PP Pp Pp pp quite difficult to tell P from p unless next to each other. Do not italicize the "P" - only the "p" P parent 2 alieles possible genotypes of offspring p C05-F47-OB11USB, Figure 6 A Punnett square is a grid system for predicting the possible genotypes of offspring probability the possibility that an outcome will occur if it is a matter of chance Probability is a measure of the chance that an event will happen. For example, when you flip a coin to settle a dispute, there is a 50 % chance (50:50 ratio) that the coin will land on the side you have selected. However, this does not mean that if you flip the coin 10 times you will get heads 5 times and tails 5 times. Each flip of the coin is an independent event. Tutorial 1 8 Predicting Single-Characteristic Inheritance Chapter 5 • Mendelian Genetics—Patterns of Inheritance Ontario Biology 11 U SB 0176504311 C05-F47-OB11USB posted to 2nd pass folder 9-1-10 FN 8 7380_Ch05_pp002-045.indd NEL 9/1/10 11:02:34 AM Tutorial 1 Predicting Single-characteristic inheritance Sample Problem 1: Homozygous Dominant/Homozygous Recessive Cross Can we not italicize the capital YY In pea plants, the allele for yellow seed colour, Y, is dominant over that for green seed colour, y. Consider a cross between a pea and Y alleles? - it is very difficult to I think this tutorial should in the form of plant that is homozygous yellow seeds yand a plantunless that is they one of four possible combinations of alleles that the be offspring tellforthe Y and apart Step 1, Step 2. homozygous recessive for green seeds. Create a Punnett square to may receive (Figure 8). are next to each other. Y and y are determine the possible genotypes and phenotypes of the offspring. much more distinctive The first step is establishing the proper Solution yellow seed gametes, the second is placing them in the The plant that is homozygous for yellow seedto colour has a - then in C05-F07-OB11USB If we don't want do this table. YY genotype of YY. The plant is homozygous green the that diagrams (butfor not theseed text) colour has a genotypecould of yy. we use a larger font for the StepDraw 1: a Punnett square that shows the genotypes of the Y Y Y alleles so they are clearly two parents and the gametes that they can produce. Write the I think including short thin distinct? symbols for the gametes across the top and along the left side lines is useful but I don't like of the square (Figure 7). Note that, each parent can supply two Yy Yy y the long thick black lines. possible gametes, each containing one of two possible alleles. NO ONE that can find uses C05-F06-OB11USB anything like these thick black lines except parent us ingenotypes the old 11U. They are in distracting and misleading. alleles gametes Most books place gametes in little circles to show they y represent alleles "in sex cells" not just letters on a yy page. green seed y yellow seed green seed YY Y Y C05-F06-OB11USB Crowle Art Group 2nd pass y Yy Figure 8 A complete Punnett square showing all the possible genotypes for the offspring. process - not just show the result. We are instructing the student on "how to" Step 2: Now fill in the boxes of the Punnett square by combining the gametes corresponding to each row and column. Each box represents a possible offspring genotype. parent genotypes Yy alleles in gametes the possible gametes from each parent across the top and down Not Approved the left-hand side. In this case the two possible gametes from offspring. each parent are Y and y. Proceed to form all the possible zygotes (Figure 8). Yy In the completed Punnett square, there are 1 YY, 2 Yy, and 1 yy genotypes. Therefore, the genotype ratio is 1 homozygous dominant plant (YY ) to 2 heterozygous plants (Yy) to 1 homozygous recessive plant (yy), or 1:2:1. Both YY and Yy plants have yellow seeds. The phenotype ratio in the Figure 8 F2 generation is 3 yellow seed plants (YY 1 2Yy) to 1 green seed plant (yy), or 3:1. Y y Y YY Yy y Yy yy C05-F08-OB11USB 5.1 Mendelian Inheritance nel 7380_Ch05_pp002-045.indd 9 Yy The four possible genotypes for the cross between a pea We don't tell the student where these letter plant that is homozygous for yellow seed colour and a pea plant come from. I realize it is "obvious" from the that is homozygous recessive for green seed colour are Yy, Yy, figure is the a tutorial Yy, and Yy.but The because offspring willthis all have genotype we Yy, soshould will all use wording that describes each step in the have the yellow seed phenotype. I prefer including little arrows in this first drawing Figure- 7I think An incomplete Punnett square showing the possible which I include here gametes from each parent it is visually meaningful as it shows where the gametes The letters in each box within the Punnett square represent Ontario Biology 11 U SB "come from". So the students "follow the arrows" Sample Problem0176504311 2: Heterozygous/Heterozygous Cross C05-F07-OB11USB FN - this models howTwo they heterozygous yellow seed plants (Yy) are crossed. Determine Crowle Art Group CO decide what letters the genotype and phenotype ratios of the F2 generation offspring. represent the possible Solution 2nd pass Pass gametes from each and label the parent genotypes. Insert particular parent.Draw a Punnett square Approved 11 U SB yy posted to 2nd pass folder 9-1-10 9 8/31/10 4:34:30 PM Sample Problem 3: Determining Parent Genotype Using Offspring Phenotype Ratios Table 2 shows the phenotypes of offspring produced in a cross. Determine the probable genotype of the parents. Which allele is dominant? Assume that the trait is influenced by only two alleles and follows the laws of Mendelian inheritance. Use the letters R and rsteps to represent alleles. the andthe think we have a C05-F09-OB11USB I like mismatch if don't include them above Table 2 when there clearly "are" steps. Offspring phenotype Number of plants red tomato 1821 yellow tomato Rr R r R RR Rr r Rr rr Rr 615 Step 1. Determine the whole number ratio of red tomato plants to yellow tomato plants. red 1821 2.97 5 5 5 3:1 yellow 615 1 Step 2. Since this is a 3:1 phenotype ratio, it matches a cross between two heterozygous parents. Therefore, we predict that red (R) is dominant to yellow (r), and the parent plants were both Rr. Check Your Answer: Use a Punnett square like the one shown in Figure 10 to cross two heterozygous red tomato plants. Figure 10 The cross between two heterozygous red tomato plants produces a 3:1 phenotype ratio of red to yellow tomato plants. Genotypically, one tomato plant is homozygous dominant (RR), two are heterozygous (Rr), and one is homozygous recessive (rr). In this case many heterozygous tomato plants were crossed, 3 and of 2436 (1821 1 615) tomato plants, about produced red 4 1 tomatoes and produced yellow tomatoes. 4 Practice 1. A researcher crossed a homozygous yellow seed plant (YY ) and a heterozygous yellow seed plant (Yy). Determine the genotype and phenotype ratios of the offspring. 2. A researcher crossed a heterozygous yellow seed plant (Yy) and a recessive green seed plant Ontario Biology 11 U SB (yy). Determine the genotype and phenotype ratios of the offspring. 0176504311 C05-F09-OB11USB FN Test Crosses Crowle Art Group CO A test cross is used to determine if an individual exhibiting a dominant trait is homozygous or heterozygous for that trait. A test cross is always performed between 1stunknown pass the genotype and a homozygous recessive genotype. This is achieved by Approved crossing the individual with the dominant trait with an individual that exhibits the Not Approved recessive trait. The results reveal the genotype of the parent: • Ifalltheoffspringdisplaythedominantphenotype,thentheindividualin question is homozygous dominant. • Iftheoffspringdisplaysbothdominantandrecessivephenotypes,thenthe individual is heterozygous. test cross a cross used to determine the genotype of an individual expressing a Pass dominant trait Test crosses work well with species that reproduce quickly and in large numbers. For example, test crosses can be used on mice because they produce large litters (7 to 12 mice on average) and have a gestation period of only 18 to 21 days. Also, mice can become pregnant again while nursing a litter. Therefore, a large sample size of mice can be studied in a short period of time. Cows, on the other hand, give birth to only one calf each year and the gestation period of a cow is 9 months. This makes testcrossing cows difficult. Although farmers often attempt breeding cows with beneficial traits, it takes a long time to improve a herd. Today, test crosses are rarely performed. Advances in molecular biology techniques allow geneticists to test for specific alleles within the genotype of an organism directly, rather than having to wait for the production of offspring. 10 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 10 posted to 2nd pass folder 9-1-10 nel 8/31/10 4:34:31 PM Tutorial 2 Determining an Unknown Genotype Sample Problem 1: Performing a Test Cross Animal and plant breeders are often interested in whether or not an individual will consistently produce offspring with a desired trait. A breed of rooster has a dominant trait (S)—a comb that resembles a series of fingers—while a breed with a recessive trait (s) has a flat comb (Figure 11). A breeder would like to use a true-breeding, homozygous, Again, asrooster a tutorial think we five-fingered-comb as a studI don't in her breeding program. should state it in this way. We should She has many roosters to choose from but does not know if they have . (Ss) . . .or homozygous dominant (SS) for the trait. are heterozygous (a) What type of hen should she cross with the roosters in order Step 3.whether Draw athe Punnett to to determine particular roostersquares is homozygous or heterozygous for the fi ve-fi ngered comb? Explain your determine the expected results (Figure reasoning 12) using Punnett squares. (b) What are the expected results? No matter which genotype hen is crossed with a homozygous dominant rooster (SS), all the offspring will inherit an S allele from the rooster and have a fivefingered comb. However, the heterozygous roosters could Unfortunately again - the S and s look pass on either an S or an s allele. Therefore, you can tell quite similar unless side by side. Could them apart if you can detect this s allele in the offspring. we try increasing the font size of the "S" The only way to tell if an offspring receives an s from the or only use italics for the "s"? rooster is if the offspring also receives an s from the hen and is born with a flat comb. Therefore, to ensure that all the offspring receive an s allele from the hen, the breeder should choose a homozygous recessive (ss) hen. The Punnett squares for the crosses of a homozygous ss hen with the two genotypes of roosters are shown in Figure 12. rooster Ss rooster SS S s S S s Ss Ss s Ss Ss s Ss ss s Ss Ss hen ss (a) C05-F10-OB11USB (b) (a) C05-P03-OB11USB hen ss C05-P04-OB11USB Figure 11 A rooster could have a five-fingered comb (a) or a flat comb (b). Step 1. List the possible genotypes of roosters and hens. The roosters of interest all exhibit the dominant trait, so they must be either homozygous dominant (SS) or heterozygous (Ss). There are three possible hen genotypes: homozygous dominant (SS), heterozygous (Ss), and homozygous recessive (ss). Step 2. Decide which hen genotype could be used to distinguish homozygous roosters from the heterozygous roosters. (b) C05-F11-OB11USB Figure 12 (a) Homozygous recessive hen and homozygous dominant rooster cross (b) Homozygous recessive hen and heterozygous rooster cross Answers: (a) The breeder should cross the rooster with a hen with a flat comb. Using a homozygous recessive (ss) hen ensures that all the eggs will contain a recessive allele from the hen and none will contain a dominant S allele that would mask the presence of a recessive s allele in the rooster. (b) If the rooster is homozygous dominant, all the offspring will express the five-fingered comb. If the rooster is heterozygous, we would expect that 50 % of the offspring will have a five-fingered comb while the remaining 50 % will have a flat comb. Ontario Biology 11 U SB Ontario Biology 11 U SB 0176504311 0176504311 C05-F10-OB11USB FN C05-F11-OB11USB FNGroup Crowle Art CO Crowle Art Group CO Pass Approved Not Approved 2nd pass Pass Approved Not Approved 2nd pass 5.1 Mendelian Inheritance nel 7380_Ch05_pp002-045.indd 11 posted to 2nd pass folder 9-1-10 11 8/31/10 4:34:34 PM Practice 1. The gene for whisker length in seals occurs in two different alleles. The dominant allele (W ) codes for long whiskers, and the recessive allele (w) codes for short whiskers. youlong-whiskered expect to and the other parent is short-whiskered, (a) If one parent is heterozygous what percent of offspring would have short whiskers? (b) A male long-whiskered seal is mated in captivity with a number of different females. With some females all their offspring are long-whiskered, and with some females there are both long- and short-whiskered offspring. (i) What is the genotype of the male? How can you be sure? (ii) Would it be possible to find a female mate that would produce only short-whiskered offspring? Explain. 2. Mendel found that crossing wrinkle-seeded (rr) plants with homozygous round-seeded (RR ) plants produced only round-seeded plants. What genotype ratio and phenotype ratio can be expected from a cross of a wrinkle-seed plant and a heterozygous plant for this characteristic? Mini Investigation What Are the Chances? SKILLS HANDBOOK Skills: Performing, Analyzing, Evaluating, Communicating This is ALL F1 When two heterozygous are crossed, the probability of generation. Theyindividuals do producing each genotype is 25 % homozygous dominant: 50 % not perform a second heterozygous: 25 % homozygous cross. Change all F2's recessive. In this investigation you will model a cross between two heterozygous individuals. to F1's. You will then determine the genotype and phenotype ratios of your model F2 generation. In addition, you will investigate the role that sample size and probability play in producing a 25:50:25 ratio in the F2 generation. Equipment and Materials: two small pouches containing 40 beads each (20 white beads and 20 red beads) 1. Assign the red bead the dominant allele, R, and the white bead the recessive allele, r. Label the two pouches “P1” and “P2.” Each pouch therefore contains beads that represent the gametes from one heterozygous individual (20 R and 20 r). Together, the two pouches represent the parent generation. 2. Without looking, draw one bead from Pouch P1 and one bead from Pouch P2. Place the beads together on a flat surface. This represents the joining of two gametes to form a new individual. The colours represent the alleles and the resulting genotype of the offspring. For example, two red beads would represent a new RR member of the F1 generation. Return each bead to the pouch that you drew it from. 3.B., 10. then tally the total number of homozygous dominant, heterozygous, and homozygous recessive individuals produced. 4. Pool your data with your classmates’ data. A. What was your percentage ratio of homozygous dominant: heterozygous: homozygous recessive individuals in your 20 F1 offspring? Calculate each percentage by dividing your genotype counts by the total sample size (20) and multiplying by 100. For example, if you had 4 homozygous dominant individuals, the percentage of homozygous 4 individuals would be 3 100 5 20 %. T/I 20 B. Did your ratio approach a 25:50:25 ratio? T/I C. Answer A and B with the pooled class data. Remember to use the total class sample size to calculate percentage values. T/I D. Check with other students. Were the percentages using the pooled data closer to or further from the theoretical value than the percentages using single-student data. Why is sample size important? T/I E. What aspect of Mendel’s own experimental design suggests he understood the effects of sample size? T/I 3. Repeat Step 2 another 19 times, producing a total of 20 offspring. Record the genotype of each offspring and 12 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 12 posted to 2nd pass folder 9-1-10 nel 8/31/10 4:34:36 PM 5.1 Summary • Gregor Mendel studied heredity in pea plants. He was the first person to successfully record and quantify heredity data. • Genes have alternate forms known as alleles. The alleles of a gene are found in a specific position on a specific chromosome. Individuals have two alleles for new bullet each gene. two alleles areoffound at specific • Each parent passes on toThe its offspring only one its two alleles for eachmatching gene. This is called the law of segregation. locations on homologous chromosomes. • Some alleles are dominant, while others are recessive. Dominant alleles are always expressed in the phenotype, but recessive alleles do not show up unless they are the only present thesame genotype. This is called the law of dominance. twoallele copies of inthe • Individuals who carry only one type of allele are homozygous for that gene. Individuals who carry different alleles are heterozygous for that gene. • A Punnett square is a tool that can be used to illustrate how alleles are distributed from parent to offspring and to predict the frequency of phenotypes and genotypes within a population. set of offspring. • A cross between two heterozygous individuals produces a genotype ratio of 1:2:1 and a phenotype ratio of 3:1. could be cut definition rather than summary point. 5.1 QuestionsAlthough unlikely it is possible that the man is homozygous so this 9. Humans who have an abnormally high level of cholesterol 1. Why was the pea plant an excellent choice for Mendel’s question does not have a definitive are said to suffer from familial hypercholesterolemia. The inquiry into heredity? answer. Soexperimented change towith truegene for this disorder is dominant (C ). A man who has 2. Why was it important that Mendel K/U breeding-variety plants? K/U . . a man who is heterozygous 3. What were the phenotype and genotype ratios of Mendel’s familial hyper . . . . F1 crosses? What do the numbers represent? K/U 4. List Mendel’s conclusions from his experiments. How do the conclusions relate to what is known today in the field of genetics? A 5. Differentiate between the following: (a) dominant and recessive (b) gene and allele (c) homozygous and heterozygous K/U 6. State the law of segregation. How does the law relate to meiosis? A 7. Explain why it is important that Mendel had a large sample size of offspring to count in his experiments. T/I 8. The smooth pea pod allele (S) is dominant, while the wrinkled pea pod allele (s) is recessive. A heterozygous, smooth pea pod plant is crossed with a wrinkled pea pod plant. Use a Punnett square to solve the following: T/I C (a) Determine the predicted genotype ratio of the offspring. (b) Determine the predicted phenotype ratio of the offspring. (c) If this cross produced 50 plants, how many plants would you predict would be wrinkled pea pod plants? for familial hypercholesterolemia marries a woman who does not. What is the probability that they will have children that suffer from this disorder? T/I C 10. Holstein dairy cattle normally have black and white spotted coats. On occasion calves with a recessive red and white spotted coat are born. A dairy farmer purchases a prized black and white spotted bull. To the farmer’s dismay the bull produces a red and white spotted calf when mated to one of his cows. (a) What is the genotype of the bull? (Use R and r for the colour alleles.) T/I C (b) What phenotype ratio is expected in the offspring if the bull is mated to a red and white spotted cow? 11. At one time, if a farmer wanted to improve his or her cattle herd, he or she would have to buy an expensive bull from another farmer who had a herd proven to show desirable characteristics. Now, semen from bulls with desirable characteristics can be shipped all over the world to help farmers improve their herds. Use the Internet to learn more about the use of artificial insemination (AI) as a cattle K/U T/I A breeding option. (a) What are the primary advantages and disadvantages of using AI for cattle breeding? (b) How popular is AI as a breeding method for the beef and dairy industry? See Over matter 5.1 Mendelian Inheritance 13 NEL 7380_Ch05_pp002-045.indd 13 posted to 2nd pass folder 9-1-10 8/31/10 4:34:36 PM 12. Plants contain many hormones that determine their characteristics. Mendel was unaware of the hormones that T/I A resulted in the different traits in his plants. (a) Using the Internet or other sources, research the role that the hormone gibberellin plays in determining stem length (plant height). (b) How could knowledge of gibberellin release in plants help agriculturists? I would cut - very tangential to genetics. Better go to nare els on s c i en c e for the plant unit where hormones discussed in detail anyway. If needed, include a research question that has a genetics aspect to the "answer." Over matter NEL 7380_Ch05_pp002-045.indd 13 posted to 2nd pass folder 9-1-10 OM13 8/31/10 4:34:36 PM 5.2 determine the phenotype complete dominance an allele will always be expressed, regardless of the presence of another allele In codominance an allele (such as the A blood type allele) is also always and fully expressed regardless of the presence or absence of other alleles. incomplete dominance neither allele is dominant; all alleles contribute equally to the phenotype, to result in a blend of the traits Variations in Heredity Mendel’s experimental work involved the crossing of what he called “typical” plants (homozygous dominant) with “atypical” plants (homozygous recessive). Mendel had discovered complete dominance, in which only one of the alleles is expressed, despite the presence of the other allele. Not all traits are passed on from parent to offspring in the simple patterns that Mendel proposed. Variations in the patterns of heredity exist, and dominance is not always complete. Incomplete Dominance and Codominance Mendel’s work provided an explanation of why the traits of parents did not blend in the offspring. Yet blended inheritance is common in nature. In snapdragons one of the genes that controls flower colour has one allele for red (R) and one allele for white (W). A homozygous RR plant will produce red flowers, while a homozygous WW plant will produce white flowers. However, the heterozygous plants will produce pink flowers (RW). In this case, the actual flower colour (phenotype) is a result of varying amounts of red and white pigments. The homozygous (RR) plant produces red pigment, the homozygous (WW) plant produces white pigment, and the heterozygous (RW) plant produces both red pigment and white pigment. Neither of the alleles is dominant, because the red pigment cannot mask the white pigment and the white pigment cannot mask the red pigment. This type of interaction, in which a heterozygous phenotype is a blend of the two homozygous phenotypes, is known as incomplete dominance. Interestingly, in this case, incomplete dominance still results in the same Mendelian genotype ratio of 1:2:1 (Figure 1). C05-F12-OB11USB F1 C05-P05-OB11USB codominance both alleles are expressed fully to produce offspring with a third phenotype CR CW CR C R CR C R CW CW C R CW CWCW 1 red C R CR Use the proper allele designations immediately and have the Learning tip next to that paragraph. If the learning tip comes late student won't have a clue where this Punnett square notation came from. I would call this "mixed" because both alleles are 4 Learning Tip 2 pink C R C W F2 expressed - there is no "new" version. In incomplete 4 Notation of Alleles dominance you have a "new" phenotype - pink is NOT 1 white C R C W Notation of alleles for a specific red or white. But in codominance - like blood type an 4 gene can be represented using 1 Colour snapdragons is an example incomplete dominance. When crossed, redAB person is A andFigure B - the "A" intrait is all/fully A withofno superscripts. For example, consider flowering and white-flowering snapdragons produce different in phenotype from an AA or AO individual. thepink-flowering offspring. A cross between the alleles for colour in snapdragons these pink F1 individuals produces an F2 generation with a ratio of 1 red to 2 pink to 1 white (1:2:1). shown in FigureB1.is Theall gene B.is C for colour. The alleles are red (R) and white (W ). When you combine the notations for genes and alleles, the result is C R for the red allele and C w for the white allele. Another type of interaction between alleles occurs when both allele products apmixed pear in the offspring at the same time. In this case, a third phenotype is generated. This type of interaction is called codominance. A classic example of codominance pure purecow will produce a roan appears in shorthorn cattle. A red bull crossed with a white calf (Figure 2). Roan calves have intermingled white and red hair. 14 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 14 Ontario Biology 11 U SB posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:34:38 PM F1 generation C05-F13-OB11USB roan cow roan bull roan bull red bull P generation white cow Hr Hr Hw H rH w H rH w Hw H rH w H rH w × roan calf red H rH r roan H rH w roan H rH w white H wH w F2 generation Figure 2 In codominance, one allele does not mask the other allele. Both alleles influence the final phenotype. In shorthorn cattle, roan calves have intermingled red and white hair. I would replace with. Codominance and Dominance: ABO Blood Types If i is paired IA or B, then the individual expresses the dominant allele Human bloodwith type is Iboth a codominant and dominant genetic trait. There are (I A or I B ) and is either type A or type four major blood types: A, B, AB, B. and O. The blood type gene has three posA B sible alleles. They are I , I , and i. Each allele codes for a different enzyme that places different types of sugars on the surface of a red blood cell. If you are I A I A (type A), an enzyme places, one type of sugar on the surface of the cell. If you are I B I B (type B), another enzyme places, a different sugar on the cell surface. If you are I A I B (type AB), both sugars are placed on the cell surface. Type AB blood is an example of codominance. The allele i codes for an enzyme that makes a simpler surface molecule that lacks the extra sugars of the A, B, or AB blood types. If an individual is ii, he has type O blood. If i is paired with I A or I B, then the individual is heterozygous for the respective allele (I A or I B). Type I Ai blood and type I Bi blood are examples of dominant inheritance. Table 1 shows the distribution and expression of the blood type alleles. One of the gametes is provided by the father and the other is provided by the mother. io Biology 11 U SB Table 1 The Distribution and Expression of the Blood Type Alleles These two columns 04311 are notC05-F13-OB11USB really Gamete 1 Gamete 2 Genotype neededCrowle - the Art Group A I student knows what the gametes were if I A 2nd pass ovedthey are given the IB genotype. We could pproved IB use the space for the column - "Able IA to i Receive Blood from ." . . Blood type IA I AI A A i I Ai A IB I BI B B i I Bi B IB I AI B AB i ii O don't split genotype I^BI^B We don't actually say that A and B are dominant over i here where we are discussing the details. We don't have to tell them they are heterozygous - this is not new info and not relevant. New<rom> column . . Able to recieve C05-P06-OB11USB blood from A, O A, O B, O B, O A, B, AB, O O Seems only fair to also include type O and AB An individual with type A blood produces an immune response against type B and individuals However, this is long way to present this type AB blood. An individual with type B blood produces an immune response against typeAB blood and type AB blood. A blood transfusion can take place onlyinformation be-tween twoclearly. This is the info that is missing . . . An can individual people who have compatible types of blood. Individuals with any blood type receive with type O blood produces an immune response against type A,B and AB blood. An type O blood, because it does not have an identifying A or B sugar on the surface of the red blood cells, so the cells are not targeted as foreign by the recipient’s immune system. individual with type AB blood shows no immune If an incompatible blood type is transfused, the patient’s life may be put at risk. In an response to theFigure other blood types. 3 Blood banks are always in emergency situation when there is no time to test the patient’s blood type, or if a certain need of blood donations. Type O blood is blood type is in short supply, type O blood may be used (Figure 3). valuable because it is compatible HOWEVER this could be included inwith one column in The frequency of the blood type alleles varies throughout the world’s population. all blood types. (my addition above). Then this paragraph Genetically isolated populations sometimes have very high frequenciesthe for table particular could just have a simple "example" and note that alleles. For example, about 80 % of the Native Americans of the Blackfeet Nation NEL 7380_Ch05_pp002-045.indd 15 type O is the "universal donor" and type "AB" the 5.2 Variations in Heredity 15 universal recipient. posted to 2nd pass folder 9-1-10 8/31/10 4:34:40 PM web LInk To learn more about blood types, g o t o n e l so n sci e nce Investigation 5.2.1 Gummy Baear Genetics In this investigation, you will use the type and number of “offspring” you have to predict the possible genotypes of the parents. Make sure you review the different Mendelian monohybrid crosses. Pikuni Indians in Montana have type A blood because the frequency of the I A allele is very high in this population. Codominance can provide an even greater variation in the population: there are genes that have many more alleles than just three or four. For example, there is a gene that plays a role in the acceptance or rejection of a transplant. This gene has more than 200 different types of alleles. 5.2 Summary determine the phenotype • Allelesthatareexpressedregardlessofthepresenceofotherallelesfollowa pattern of inheritance called complete dominance. • Aheterozygousindividualwithanintermediatephenotypebetween the phenotypes of the two homozygous individuals follows a pattern of inheritance called incomplete dominance. • Manygeneshavemorethantwoalleles.Bloodtypeisanexampleofagene with multiple alleles. The three blood type alleles are IA, IB, and i. Different combinations of the three alleles produce type A, type B, type AB, and type O blood. • Codominanceoccurswhenbothallelesareactive.Th eheterozygotehas the phenotypes of both homozygotes. Type AB blood is an example of codominance. 5.2 Questions 1. Explain in your own words the meaning of dominance, codominance, and incomplete dominance. k/U 2. In some chickens, the gene for feather colour is controlled by codominance. The allele for black is FB and the allele for white is FW. The heterozygous phenotype is known as erminette. T/I A (a) What is the genotype for black chickens? (b) What is the genotype for white chickens? (c) What is the genotype for erminette chickens? (d) If two erminette chickens were crossed, what is the probability that they would have a black chick? A white chick? 3. A geneticist notes that crossing a round radish with a long radish produces oval radishes. If oval radishes are crossed with oval radishes, the following phenotypes are noted in the F2 generation: 100 long, 200 oval, and 100 round radishes. Use symbols to explain the results obtained for the F1 and F2 generations. T/I C 4. Describe how Mendel’s conclusions may have differed if he had worked with plants whose alleles were incomplete dominant. k/U T/I 5. Thalassemia is an inherited anemic disorder in humans. Individuals can exhibit major anemia, minor anemia, or be completely normal. Assume only one gene is involved with two alleles in the inheritance of this condition. What type of inheritance is thalassemia governed by? What are the corresponding genotypes to the three scenarios? k/U T/I 6. An individual has type A blood. List the possible genotypes this individual may have. k/U T/I A 16 7. Suppose a father of blood type A and a mother of blood type B have a child of type O. What are the possible blood types of the mother and father? k/U T/I A 8. Suppose a father of blood type B and a mother of blood type O have a child of type O. What are the chances that their next child will be blood type O? Type B? Type A? Type AB? k/U T/I A 9. Explain why blood type inheritance is an example of both codominance and complete dominance. k/U 10. An additional characteristic of human blood is the presence or absence of a blood protein referred to as the Rh factor. People with the protein are Rh+ and those without it are Rh–. Research this characteristic to answer the following k/U T/I A questions: (a) What are the genotypes of individuals who are Rh– and Rh+? Is this an example of complete dominance, incomplete dominance, or codominance? (b) How can the Rh blood type of two parents be of concern during a pregnancy? How can possible harmful complications be avoided? 11. Tay–Sachs disease is a fatal lipid storage disease and is an example of incomplete dominance. Using the Internet and k/U T/I A other resources, research the following: (a) What is Tay–Sachs disease and how does it affect an affected individual’s health? (b) What is the prognosis for an individual with Tay–Sachs? (c) Why is Tay–Sachs disease considered an example of incomplete dominance? Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 16 posted to 2nd pass folder 9-1-10 go t o n e ls on s c i en c e nel 8/31/10 4:34:40 PM 5.3 Pedigrees—Tracking Inheritance Thanks to the laws of heredity, revealed by Mendel, scientists can now do genetic analyses of heritable traits. Human genetics follow the same patterns of heredity seen in organisms such as the garden pea. For example, if we know that a child is born with a trait that neither parent has, then we can infer that the trait must not be controlled by a dominant allele and that the child must have inherited two recessive alleles. Scientists are especially interested in determining the patterns of inheritance of genes that are beneficial or detrimental to human health. For obvious reasons, experimental genetic crosses cannot be conducted on humans. However, we can use what we know about heredity to investigate individuals and track the inheritance of a trait from generation to generation within a family. pedigree Charts The simplest way to visually follow the inheritance of a gene is to construct a family tree known as a pedigree. A pedigree is a chart that traces between the inheritance of a certain connections trait among members of a family. It shows the phenotype for all parents and offspring, the sex of individuals in each generation, and the presence or absence of the trait being tracked. The chart is composed of symbols that identify gender and relationships between individuals (Figure 1). C05-F14-OB11USB C05-F15-OB11USB C05-F16-OB11USB redundant - the ofpresence pedigree a diagram an individual’sor absence of the traitgenetics "is" the ancestors used in human to analyze the Mendelian inheritancefirst of phenotype. So replace a certain trait; also used for selective portion as indicated. breeding of plants and animals C05-F17-OB11USB OK - lots of items here - myopia is quite complex and a number of references I found said it was or affected male normalrecessive male normal female affected female predominantly so. Also there is an environmental component in many cases. So I think we should change the mating siblings identical twins fraternal twins trait entirely. Regardless of the trait (female) however - theC05-F18-OB11USB caption and figure were C05-F19-OB11USB C05-F20-OB11USB C05-F21-OB11USB both incorrectFigure for a1 dominant trait. Squares represent males, and circles represent females. Individuals who express a trait are shown in a shaded circle or square. Mating between two individuals is shown by a horizontal line, and children are connected to their parents with vertical lines. So - recommend we switch to a different dominant trait - Pedigree freckles, curly charts arehair, very ordered within the constraints of the available informaIf this 2isthat trueeach then the pedigree tion about the family. You will notice in Figure generation is identified double-jointed. is notsymbolize valid. IIIindividuals 2 and IIIwithin 3 have by Roman numerals and that Arabic numbers a given inherited a dominant allele generation. The birth order within each group of offspring is drawn from leftfrom to right, Also - as is - if we were using this from oldest to youngest. Figure 2 shows a two pedigree for a family with the trait of nearrecessive parents. myopia info we would also have to alter sightedness. a later tutorial question where we ask and analyze pedigrees to help trace the genotypes Genetic counsellors construct Also this caption only mentions students to determine whether myopia and phenotypes in a family. Theyiscan determine if and how any particular trait runs individuals when in a family. For example, expectant might want to know how afive recessive allele dominant or recessive. They have been parentsfour exhibit the trait. for hemophilia (a blood clotting disorder) has been inherited in past generations. told the answer AND the pedigree chart A genetic counsellor could help predict how that gene will be passed on to future is again wrong "if" we were sticking with generations. dominant myopia. C05-F22-OB11USB I 1 2 2 3 II 1 4 5 III 1 2 3 Figure 2 An example of a pedigree chart spanning three generations. In this pedigree, the grandmother (I-1), one of her daughters (II-2), one of her sons (II-3), and her grandson (III-3) are nearsighted. The allele for near-sightedness (S) is dominant over the allele for normal vision (s). New Fig 2 caption: An example of a pedigree chart spanning three generations. In this pedigree, the grandmother (I-1), one of her sons (II-3), one of her daughters (II-4), and her grandson (III-3) are nearsighted. The allele for near-sightedness (S) is dominant over the allele for normal vision (s). Ontario Physics 11 SB nel 0-17-6504311-g1 FN CO 5.3 Pedigrees—Tracking Inheritance 17 C05-F14 to 21-OB11USB 7380_Ch05_pp002-045.indd Allan Moon 17 Ontario Physics 11folder SB posted to 2nd pass 9-1-10 8/31/10 4:34:41 PM Tutorial 1 Interpreting Pedigree Charts Figuring out genotypes from phenotypes on a pedigree chart requires you to use a process of elimination. You can often determine which genotypes are possible, and which are not. Sample Problem 1: Determining Genotypes of Individuals Marfan syndrome is a genetic disorder that affect’s the body’s connective tissue. When the dominant allele (M ) is expressed, an individual will have Marfan syndrome. People with no defect in the Marfan allele are homozygous recessive (mm). Individuals with the syndrome are typically very tall, with disproportionately long limbs and fingers, and sometimes have problems with their hearts and eyes. Use the pedigree chart (Figure 3) to determine the genotypes of all individuals, if possible. What information in the pedigree confirms that Marfan syndrome is a dominant trait? 2 II 1 2 The shapes for the mother (I-2) and the two sons (II-1 and II-3) are not shaded, indicating that they do not have Marfan syndrome. Therefore, they are all homozygous recessive (mm) (Figure 5). I NO information confirms it is dominant. This identical chart is possible for a recessive trait. I 1 Step 2. Determine which individuals do not carry a dominant Marfan allele. 3 Figure 5 C05-F23-OB11USB Figure 3 A family’s pedigree showing the inheritance of Marfan syndrome Step 1. Determine which individuals carry a dominant Marfan allele. The shapes for the father (I-1) and the daughter (II-2) are shaded, indicating that they have Marfan syndrome. The Marfan allele is dominant, so all individuals expressing this trait must be either MM or Mm. Therefore, the father and daughter must be either heterozygous (Mm) or homozygous dominant (MM ). I-1 and II-2 have a dominant allele (M ) and either another dominant allele (M ) or a recessive one (m) (Figure 4). 1 M_ 2 mm II 1 mm 2 M_ C05-F25-OB11USB 3 mm Step 3. Determine which individuals are heterozygous or homozygous for the Marfan allele. The mother is mm, so she can pass on only a normal allele to her offspring. The daughter must be heterozygous (Mm). The two sons do not have Marfan syndrome, so they must both have inherited a normal allele (m) from the father. The father must be heterozygous (Mm). The completed pedigree chart is shown in Figure 6. C05-F26-OB11USB I 1 Mm 2 mm I 1 M_ II 2 1 mm II 1 Figure 4 11 SB -g1 C05-F23-OB11USB 2 3 Ontario Physics 11 SB M_ 0-17-6504311-g1 C05-F24-OB11USB FN C05-F25-OB11USB CO Allan Moon Pass 1st pass 2 Mm 3 mm Figure 6 Individuals with Marfan syndrome must have at least one M, and recessive individuals must be mm. Approved Allan Moon Not Approved 1st pass 18 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 18 posted to 2nd pass folder 9-1-10 nel 8/31/10 4:34:41 PM Sample Problem 2: Determining the Mode of Inheritance for an Allele Individuals with albinism have a defect in an enzyme that is involved in the production of melanin, a pigment normally found in the skin. These individuals have little or no pigment in their skin, hair, and eyes (Figure 7). The characteristic is governed by only two alleles: the normal allele and the albinism allele. Analyze the pedigree chart below (Figure 8) to determine whether the albinism allele is a dominant or recessive allele. Then determine the genotypes of each individual. Use P and p to represent the dominant and recessive alleles, respectively. This is ok but we did tell them that albinism was recessive previously (page 8). I 1 3 2 4 II 1 2 3 4 5 6 III C05-P08-OB11USB Figure 7 The lack of melanin makes a person with albinism much more susceptible to sun damage. C05-F27-OB11USB 1 2 3 Figure 8 A family’s pedigree chart for albinism I P_ Step 1. Determine which individuals carry the recessive albinism allele. P_ pp P_ PP_ pp pp P_ [ARTPp ALTs:Pp - add labels for I, II, III, as in Figure 8 - make uppercase P P? pp italP?x10] pp PP_ PP_ Pp C05-F28-OB11USB Pp Figure 9 All individuals can be labelled P or pp based on their expressed traits. Both parents of pp individuals, andart all offspring of awider pp parent, must This is 6 picas than the C have at least one p allele. I recessive individuals are labelled pp, and all P_ dominant P_ individualsP_are P_ labelled with one P (Figure 9). width of 18p6 ... but this is the standard size for pedigree charts Can the charts have different sizes without confusion? Pp Pp Pp Pp II P? P_ Some butPhysics not all11 of SB the missing alleles can be filled in by looking at the Ontario 0-17-6504311-g1 parents and offspring of recessive individuals (Figure 10). P_ P_ III you of individuals you already "know" - so either Step 2. Determine which individuals carry one copy of the dominant normal use my cuts OR change to "Identify those allele. individualsIndividuals that are homozygous . . . . who do not have albinism must have at least one P allele. All P_ P_ II Individuals II-2, II-4, and II-5 have albinism, but none of their parents exhibit this trait. It is not possible to inherit a dominant trait from a parent who is not also dominant. Therefore, the trait must be caused by a recessive allele. The F1 offspring who have albinism (II-2, II-4, II-5) have inherited two copies of the p allele, making them homozygous recessive (pp) for the characteristic. The genotypes of II-2, II-4, and II-5 don't are need to determine labelled pp (Figure 9). the genotypes Step 3. Determine the genotypes of homozygous non-albino individuals and heterozygous non-albino individuals. P_ pp P_ pp pp P_ P_ pp P? pp pp III PPp PPp P? [ART ALTs: - add labels for I, II, III, as in Figure 8 - add hair space between uppercase P and ? x 3 - make uppercase P ital x10 ] PPp FN explanation C05-F27-OB11USB C05-F29-OB11USB Add - make this a thorough tutorial not leaving things to interpretation. Figure 10 CO Moon "Every parentAllan of an albino child must have at least one "p" and every albino parent Pass on a "p" 1st pass passes allele to each ofThis their art children." is 6 picas wider than the C width of 18p6 ... Practice I Approved but this is the standard size for pedigree charts 1. Phenylketonuria (PKU) is a genetic disorder caused by a dominant allele. 1 2 Not Approved Can therecessive charts have different sizes without confusion? Individuals with phenylketonuria accumulate phenylalanine in their body. High amounts of phenylalanine lead to delayed mental development. II Figure 11 is a pedigree chart that shows the inheritance of the defective 1 2 3 4 5 6 7 Ontario Physics 11 SB PKU allele in one family. p NOT P (a) How many generations are shown in the0-17-6504311-g1 pedigree chart? III (b) Determine the genotypes of the individuals in Figure 11. Let P represent FN C05-F28 and 29-OB11USB1 2 3 4 5 the dominant phenylketonuria Not theallele. greatest pedigree chart - I would note that it is actually impossible IF PKU was C05-F30-OB11USB CO recessive nel 7380_Ch05_pp002-045.indd 19 Allan Moon 11 a dominant trait but since that is not theFigure case this chart is "possible" but highly Pass 1st pass improbable. I would be tempted to at least change II4 to a blank and perhaps 5.3 Pedigrees—Tracking Inheritance 19 II5 and Approved II7 and III5 as well. We have two carriers that have passed a higher than predicted Not Approved number of recessive alleles on and both their children that marry, happen to marry people with PKU - quite a high frequency in the pedigree for a RARE disorder. posted to 2nd pass folder 9-1-10 8/31/10 4:34:45 PM "IF" myopia was dominant like we told them previously this chart would not be "possible". shows those individuals that are sensitively to poison-ivy. 2. The following pedigree is for myopia (near-sightedness) in humans. (a) Analyze the pedigree chart (Figure 12) and determine whether the disorder is inherited as a result of a dominant or recessive trait. (b) Determine the genotype for each individual if possible. However - lets just switch to a recessive trait and then it will be fine. I II Not all humans react strongly to poisonivy and this trait is thought to be controlled by a single allele. III C05-F31-OB11USB Figure 12 A family’s pedigree chart for myopia poison-ivy sensitivity Sex Linkage—Following the X and Y Chromosomes The sentences underlined in Different organisms have different numbers of chromosomes. Humans have 23 green arewhile all saying the same pairs of chromosomes. One set of chromosomes is the sex chromosomes, the thingis- found and already other 22 sets are autosomes, the non-sex chromosomes. If an allele on an known to autosome, it is said to be under the control of autosomal inheritance . With autosomal autosomal inheritance inheritance of students - nothing new. alleles located on autosomal (non-sex) inheritance, both males and females are affected equally, since there is no difference chromosomes. I really think this should be rearranged. between the autosomes of males and the autosomes of females. However, some alleles that cause genetic disorders are found on the X chromosome. sex-linked an allele that is found on one Females (XX) may have up to two copies of the gene, but males only(XY) with only one X of the sex chromosomes, X or Y,like and when Why not just state the obvious we did chromosome have only a single copy. If a female has inherited one copy of a defective passed on to offspring is expressed and then talk about the male first - the recessive allele, the other copy of the gene, on the other X chromosome, being dominant, expression of an they and will mask the effect of the recessive allele. A female who carries the recessive genetic male is the X-linked oddity.phenotypic Both the fact that allele that the is found on the from X chromosome disorder allele on only one X chromosome will not express the disorder. So, the female "always" express allele their mother - whether recessive or dominant is heterozygous and a carrier of the recessive allele. A female must inherit two copies of LInk and that it is web impossible for them to pass the recessive gene—one on each X chromosome—in order to express the disorder. A mother who is a carrier has a 50 % chance of passing on the recessive allele to the trait on toRoyal their sons. Genes her children. Since the allele with the disorder is found on the X chromosome and is Queen Victoria and her descendants recessive, this type of inheritance is called sex-linked and, more specifically, X-linked. If constitute one ofis theinherited most famous and For the female the trait a male X chromosome from a mother who carries the recessive allele, he Ontarioinherits Physics the 11 SB charts. To explore this expressed inpedigree an entirely normal way. So itwill express the disorder because the Y chromosome cannot mask the effects of that 0-17-6504311-g1 pedigree in a case study and gain seems odd tofurther be talking about "carriers of allele. The male cannot inherit an X-linked disorder from his father, since a father understanding of X-linked to a son. FN on a Y chromosome C05-F31-OB11USB disorders" in inheritance females before mentioning passes Some examples of X-linked inheritance are red–green colour blindness, hemoCO Allan Moon the situation in males. g o t o n e l so n sci e nce philia A, and male-pattern baldness. Individuals who have hemophilia A are (Xh ) Pass 1st pass not able to form a clot when they are cut and may bleed for a lengthy period of Approved time. In Figure 13 the mother is a carrier of the hemophilia allele, and the father Not Approved does not have hemophilia. The probability of this couple producing a son who has hemophilia (XhY) is 25 %, and the probability of producing a daughter who is a carrier (XHXh) is 25 %. There is a 50 % chance that the couple will produce a daughter or son who does not inherit the hemophilia allele (XHXH and XHY). XHXh XH Xh XH XHXH XHXh Y XHY XhY XHY C05-F32-OB11USB Figure 13 Hemophilia A is X-linked. A female carrier can pass on the hemophilia allele to her sons and daughters. Males cannot pass on hemophilia to their sons. 20 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 20 posted to 2nd pass folder 9-1-10 nel 8/31/10 4:34:46 PM It might be worth mentioning that "of course" there are many traits on the Y chromosome that are inherited (they determine male gender!) but are not disorders. It just seems like we are discussing the sex chromosomes only in the context of disorders. Y-linked disorders also exist and are passed on from father to son. Very few Y-linked disorders exist, since the Y chromosome is small and does not carry as much genetic information as the X-chromosome. Male infertility can be caused by a Y-linked disorder. Males who possess this disorder can have children using medical intervention. Y-linked phenotypic expression of an allele that is found on the Y chromosome seems odd - maybe "reduced fertility" but not "infertility" - at least not unless this is recent mutation for which ALL fathers have had medical intervention. The main reason there are few disorders is because evolution selects 5.3 Summary against them and since EVERY male in the affected lineage would have the disorder the selective pressure would be quite unrelenting and it is • Pedigreechartsarevisualrepresentationsofafamilytreethatcanbeusedto the inheritance of a trait. unlikely forfollow the disorder to persist. X linked are not the same because they • Ifanalleleislocatedonanautosome,oranon-sexchromosome,itis are not selected against in female carriers. So when the frequency of the The way it is written every male through autosomal inheritance. allele is lowtransmitted there is no lineage that gets "targeted" by selection. All Y linked with the disorder must have had • Sex-linkedinheritanceoccurswhenarecessivealleleisfoundontheXorY "disorders" must be quite mild (or be take effect later in life). a father that underwent this chromosome and that chromosome is passed on to the offspring. intervention. • InX-linkedinheritance,thesexesexhibitdiff erentphenotypicratios.More I know we can't get into the evo here - so please males than females will express the recessive phenotype, but more females are a) include my above note in the TR and carriers of the recessive X-linked allele. b) change wording to "one of the factors responsible for the fewer number of Y linked . ." 5.3 . .Questions become 1. Sickle-cell anemia iscan a condition in which the red blood why not have one that is cells of an individual are shaped like the letter “C.” This dominant? Here both 14 I 1 2 shape prevents the red blood cells from moving easily and 15 show a recessive through blood vessels. It can result in the cells clumping, changed because the sickle trait. Reverse every II I blocking blood flow and causing pain, infection, and organ shape only happens when colour in fig 15 and it will 1 2 1 2 3 damage. The allele that causes sickle-cell anemia is oxygen levels drop a allele can be be converted to a autosomal recessive (s), andbelow the dominant certain level the cell. represented by S. within For the following families, determine dominantII trait and III the genotypes of the parents and offspring. When it is not remain a solvable 1 2 3 2 1 3 C05-F33-OB11USB C05-F34-OB11USB possible to decide which genotype an individual is, list question.Figure 14 Figure 15 both. T/I C (b) Label the genotype of each individual in the pedigree (a) Two normal parents have four normal children and one chart. Assume that the dominant allele is A and the with sickle-cell anemia. recessive allele is a. (b) A normal male and a female with sickle-cell anemia have six children, all normal. 5. Hairy ears is a rare condition that is sex-linked. Let H be (c) A normal male and a female with sickle-cell anemia unknowns in this the dominant allele (non-hairy ears) and h many be the recessive have six children; three are normal, and three have T/I allele (hairy ears). pedigree - do we want sickle-cell anemia. (a) Examine the pedigree chart in Figure 16. Determine if this? (d) Construct a pedigree chart for the families in (b) and (c). the condition is X-linked or Y-linked. 2. Distinguish between autosomal inheritance and sex-linked inheritance. k/U 3. A male with hemophilia (X hY ) marries a woman who does not carry the hemophiliac gene (X HX H ). Use a Punnett square to answer (a) and (b). T/I (a) What is the probability of producing sons or daughters who have hemophilia? (b) What is the probability of producing daughters who are carriers of the hemophiliac allele? (b) Label all possible genotypes. I 1 nel 2 II 1 2 3 4 5 6 1 2 3 III 4. Examine the pedigree charts in Figures 14 and 15. T/I 1116 SB (a) Determine whether the mode of inheritance for theOntario Physics Figure 0-17-6504311-g1 affected individual is autosomal dominant or autosomal recessive.Ontario Physics 11 SB 0-17-6504311-g1 I would prefer to switch colours for II2 and III4. Forces them to carry through that extra generation. C05-F35-OB11USB FN C05-F34-OB11USB CO Allan Moon FN C05-F33-OB11USB Pass 1st pass CO Allan Moon Approved Pass 1st pass Not Approved Also - bit of a shame the affected males have no 4children to produce carrier daughters. 5.3 Pedigrees—Tracking Inheritance 21 Approved Not Approved 7380_Ch05_pp002-045.indd 21 posted to 2nd pass folder 9-1-10 8/31/10 4:34:46 PM Biology JOURNAL 5.4 The Gene Hunters Abstract The road to scientific achievement is a challenging one that requires scientists to have determination, perseverance, and innovation. This is well illustrated by the history of our studies of Huntington’s disease. This deadly genetic disorder strikes people in midlife and does not yet have any effective cure or treatment. Motivated by personal tragedy, and supported by advances in DNA technology, Dr. Nancy Wexler was a pioneer in the hunt for the faulty gene. These efforts not only led to the discovery of the Huntington’s disease gene (and many others), but also opened up avenues of future research that offer hope for possible treatments and a cure. Introduction Huntington’s disease (HD) is a devastating neurological genetic disorder. Inherited as a dominant autosomal trait, the symptoms of this late-onset disease do not usually appear until individuals are between 30 and 50 years of age. Symptoms include uncontrollable movements, intellectual and emotional deterioration, and other health complications that may lead to death. First described as early as the sixteenth century, the unusual symptoms were thought by some to be evidence of demonic possession. Tragically, ignorance of genetics and such beliefs likely led to the execution of many HD sufferers during the witch trials of the Middle Ages. It wasn’t until 1872 that American physician George Huntington (Figure 1) provided the first detailed description of the disease and established it as an inherited disorder. C05-P09-OB11USB Venezuelan physician Americo Negrette unknowingly made a major contribution to unravelling the mystery. He studied two villages on Lake Maracaibo, Venezuela, that had a very high incidence of a neurological disease known locally as el mal (the bad). His findings, published in 1955 in Spanish, went largely unnoticed for more than a decade, until a young researcher discovered them while searching for answers to her own questions. Personal Motivation In 1968, at the age of 23, Nancy Wexler became very interested in genetics—her mother had started to show the symptoms of HD. Nancy’s maternal grandfather and three uncles had already died of the disease. Fighting the disease became the primary focus for Nancy and her family. With great determination, she graduated from university at the top of her class and became a researcher for the National Institutes of Health in the United States. The Search for Answers Figure 1 George Huntington (1850–1916) published his landmark paper on HD when he was only 22 years old. By the early twentieth century, Mendelian laws of inheritance had become widely accepted in science, and researchers had learned that HD causes parts of the brain to degenerate. Unfortunately, with no understanding of the molecular basis of inheritance, the genetic cause of HD remained a mystery to scientists. Wexler believed that the first step to finding a treatment or cure for HD would be to discover the gene responsible for the disease. By 1981, after obtaining vital federal funding, she headed to the shores of Lake Maracaibo. Wexler studied family histories and prepared pedigrees of thousands of individuals in the Lake Maracaibo communities (Figure 2). In 1983, using pioneering advances in DNA technology, researchers were able to identify a section of DNA near the tip of chromosome #4 that is a marker for the HD gene. A marker for a genetic disease is a DNA sequence that is associated with a specific gene and is found in the same position on a chromosome in people who have or are predisposed to having that disease. The discovery of this marker meant that, for the first time, there was a conclusive test for people at risk of inheriting the disorder. 22 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 22 posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:34:46 PM C05-P10-OB11USB living organisms. Genetically modified mice were created that contained the actual human HD gene. These “model organisms” could be used to conduct experiments and study the activity of the gene. The mice were also useful for preliminary testing of new drugs without putting human patients at risk. The Challenges Ahead Figure 2 Since the early 1980s, Nancy Wexler has compiled a community pedigree of over 18 000 individuals. Innovations and Advances In 1983, modern genetics and the ability to analyze DNA was still in its infancy. It took the efforts of many more scientists more than a decade before the actual gene for HD was identified. The discovery of the HD gene in 1993 was monumental. The gene is abnormally long and prone to repeated mutation events (changes in the DNA code as it replicates). These mutations result in large numbers of copies of a very short portion of the gene. This discovery led to an understanding of an entire family of genetic diseases caused by similar abnormal “repeat sequences” of DNA. By 1996, advances in genetic technology had enabled scientists to begin conducting research on the HD gene in Even with tremendous strides in understanding, scientists still do not know exactly how the protein produced by the Huntington’s gene actually causes cell deterioration and death. There are not yet any truly effective treatments or a cure. Still, researchers and patients remain hopeful as advances in science continue. Perhaps soon an effective drug will be found. Perhaps someday a patient’s own stem cells will be used to regrow and replace defective or lost brain cells. Perhaps someday we will have the ability to actually correct or replace the defective gene using gene therapy. Meanwhile, the villagers on the shore of Lake Maracaibo, and other people with Huntington’s around the world, remain the subject of intense scientific investigation as they continue to suffer from this horrific disease. Further Reading [to come] 5.4 Questions 1. Prepare a brief chronology of events leading to our current understanding of HD. C 2. Nancy Wexler could not have accomplished her goals on her own. Use examples from this article to describe how the discipline of science builds up a knowledge base over time. A 3. Use the example of Huntington’s disease to illustrate how advances in one area of science can be applied to others. A 4. Why would Dr. Nancy Wexler look at family pedigree charts of the people of Lake Maracaibo as a starting point for her search for the Huntington gene? T/I 5. Nancy Wexler has a strong affinity for the villagers of Lake Maracaibo. She said, “The Venezuelan families have given us many gifts. . . . It is important that the world understand how much they have given. It would be fitting if they could be the first to reap the benefits of all future therapies.” T/I C (a) Use the Internet to investigate the latest therapies that are being researched for future implementation. Report back on two that you think sound promising. (b) Do you agree with Dr. Wexler that the people of Lake Maracaibo should be the first to receive a successful treatment? Why or why not? go t o n els on s c i en c e 5.3 Biology Journal: The Gene Hunters 23 NEL 7380_Ch05_pp002-045.indd 23 posted to 2nd pass folder 9-1-10 8/31/10 4:34:47 PM 5.5 Genetic Disorders cystic fibrosis (CF) a potentially fatal genetic disease that affects the respiratory and digestive tract of an individual Many human disorders have a genetic component, but the onset of a disorder may vary depending on life conditions. Some disorders can be detected at birth, while others do not manifest themselves until an individual has reached a certain age range. Some disorders can be treated and managed, while others lead to debilitating symptoms and premature death. Research geneticists spend a great deal of time and money to better understand the genetic components of such disorders. Their intent is to one day be able to detect, prevent, or fix the genetic component of the disorder. Cystic Fibrosis C05-P12-OB11USB Figure 1 A child undergoing physical therapy for cystic fibrosis. The child’s chest or back is tapped repeatedly to loosen the mucus in the lungs. This makes it easier for the child to rid his body of the mucus. grammar ok? mutation a change in the genetic code of an allele; the change may have a positive, negative, or no effect carrier testing a genetic test that determines whether an individual is heterozygous for a given gene that results in a genetic disorder genetic screening tests used to identify the presence of a defective allele that leads to a genetic disorder Cystic fibrosis (CF) is the most common fatal genetic disease in Canada. The life expectancy for individuals with CF is less than 40 years, though this is increasing every year—some individuals with CF have lived into their seventies. The disease causes the body to produce thick, sticky mucus that clogs the lungs, leads to infections, and blocks the release of enzymes from the pancreas. The pancreas produces digestive enzymes that help break down protein, fats, and carbohydrates during digestion, so children and adults who have CF must take a large number of replacement enzymes daily in pill form. In addition, individuals with cystic fibrosis must undergo physical therapy or such the day result of loosen accumulated mucus in the lungsfirst other treatments every to help (Figure 1). Cystic fibrosis is caused by a mutation, or a change in the genetic code. The defective gene was isolated and identified in 1989 by research geneticist Dr. LapChee Tsui and his team at the Hospital for Sick Children in Toronto. The mutated copy of the gene is recessive, so a child must inherit both copies of the defective allele from his or her parents in order to express CF. In the past, parents realized that they were both carriers only when their child was born with CF. Today, carrier testing is used to identify individuals who carry disorder-causing recessive genes that may be inherited by their children. In fact, the Canadian College of Medical Geneticists recommends that carrier testing for cystic fibrosis be available to anyone who has a family history of CF. Genetic counsellors work with couples that have an increased risk of conceiving a child with CF. Testing for the presence of the mutated gene in the genome is known as genetic screening. Currently, we are aware of approximately 200 mutations that lead to cystic fibrosis. The severity of symptoms depends on which DNA mutation an individual has. The genetic test is based on a blood sample that is sent to a molecular diagnostic laboratory. In Canada the test is able to detect approximately 85 % of CF mutations. Table 1 shows the probability of conceiving a child with CF according to different test result scenarios. Table 1 Risk of Having a Child with Cystic Fibrosis before and after Carrier Testing In Canada Ff C05-F36-OB11USB F F FF f Ff Test status of parents Risk of having a child with CF No test performed 1 in 2500 Both partners tested: results show one positive, one negative 1 in 600 Both partners tested: results show both positive 1 in 4 Source: Canadian Cystic Fibrosis Foundation,Carrier Testing For Cystic Fibrosis Ff f Ff ff Figure 2 The probability of these two parents conceiving a child who does not express cystic fibrosis is 75 %. From Mendel’s Punnett square for a recessive autosomal trait, we know that the probability of two heterozygous parents (Ff and Ff ) conceiving a child with CF (ff ) is 25 %, a child who is a carrier (Ff ) is 50 %, and a child who does not carry the mutation (FF) is 25 % (Figure 2). Therefore, if both parents have tested positive for the mutation, 1 the probability of giving birth to a child with CF is , as indicated in Table 1. 4 24 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 24 posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:34:49 PM research This Life with a Genetic Condition not sure there is an "issue" here. Skills: Researching, Analyzing the Issue, Communicating, Evaluating SKILLS HANDBOOK T/k Cystic fibrosis is a genetic condition that can be managed by a variety of therapies and lifestyles. In the past people with CF barely lived past childhood. Today, with treatment and healthy lifestyle choices, many people with CF live well into adulthood. They go to school, pursue careers, play sports, and can have families. Some individuals with CF even live to be senior citizens. With advances in genetics, it is quite reasonable to think that a child born with CF today may live to see a cure for the disorder. 1. Use the Internet or other sources to find stories about people who have cystic fibrosis. 2. Make a list of strategies that individuals with CF use to manage their condition. Research and record the ways each person’s strategy helps them, as stated by that individual. A. What similarities do the strategies share? A B. Think about how each person’s strategies would fit into your daily life, if you had CF. Describe in paragraph form how your daily schedule would change. Do you think some CF strategies could fit easily into your own lifestyle? What changes would you have to make? What would stay the same? C A go t o n elson sc ien c e Breast Cancer Not all genetic disorders appear right from the onset of life. As you learned in Section 5.4, Huntington’s disease does not usually show up until an individual is at least middle-aged. At this point, the potentially harmful allele may have been passed on to offspring. Cancer genes also fall into this category. Cancer is uncontrolled cell division. BRCA1 and BRCA2 are human genes that belong to a class of genes known as tumour suppressors. Tumour suppressors produce chemicals that inhibit the growth of tumours in the body. If a woman carries a defective copy of either of these genes, she has an increased chance of developing breast or ovarian cancer at an early age. Not all breast cancers are caused by a mutation in the BRCA1 or BRCA2 gene. A woman has a 12 % chance of developing breast cancer if she does not carry a copy of one of the defective genes, but a chance of 60 % if she is a carrier of even a single copy shouldn't say "some" of either the defective BRCA1 or BRCA2 genes. Thwe e environment plays a significant lawn role in determining whether cancer genes are pesticides? turned on or off. For example, a woman who is exposed to estrogen-mimicking chemicals found in lawn pesticides and certain types of plastics has a greater chance of developing breast cancer. A woman who has a family history of breast cancer may choose to undergo genetic screening for the mutated BRCA1 or BRCA2 gene. If she does have a mutation, she may decide to have a mastectomy, a procedure that involves the removal of part or all of the breast tissue. Alternatively, she may choose to increase surveillance of her breast and ovarian health. cancer a disease in which cells start to divide uncontrollably, resulting in tumours tumour suppressors a class of human genes that produce chemicals that inhibit the growth of tumours web LInk For more information on estrogenleaching plastics, go t o n els on s c i en c e phenylketonuria Breast cancer and cystic fibrosis are potentially fatal conditions caused by a mutation in a gene. In contrast, individuals with phenylketonuria (PKU) are able to live normal lives with modifications to their lifestyle. Phenylketonuria is a genetic disorder in which the affected individual is unable to utilize the amino acid phenylalanine, which the body needs in order to make proteins and essential brain chemicals. In Canada, about 1 in 20 000 people have PKU. Individuals with PKU do not possess the enzyme that breaks down phenylalanine 5.5 Genetic Disorders nel 7380_Ch05_pp002-045.indd 25 phenylketonuria (PKU) an autosomal, recessive, inherited genetic disorder that results in the accumulation of phenylalanine in the tissues and blood posted to 2nd pass folder 9-1-10 25 8/31/10 4:34:51 PM (found in most foods), and it accumulates in the blood and tissue. The brain function of a child with PKU does not develop normally. Phenylketonuria is a recessive trait. Both parents must be carriers of the defective allele in order to pass it down to the child. Unlike for cystic fibrosis, researchers have not isolated the phenylketonuria gene. Hence prospective parents cannot be counselled or tested for the probability of producing a PKU child. Instead, every newborn is screened for the presence of PKU. When a baby is about three days old, a few drops of its blood are tested for elevated amounts of phenylalanine and other compounds that are associated with genetic disorders. If the test is positive, more tests are performed to confirm or rule out PKU. If the infant does suffer from PKU, he or she must follow a diet that severely limits intake of high protein foods such as meat, fish, eggs, and milk. If the diet is followed, the child will be able to lead a normal life. If PKU is left untreated, the child will suffer arrested mental development, decreased body growth, and poor development of tooth enamel. Other Disorders Table 2 summarizes some common genetic disorders. Some of them are discussed elsewhere in this unit. Researchers are hunting for the genetic mutations that cause these disorders and are working on developing tests to screen for them. Table 2 Genetic Disorders and Their Mechanism of Inheritance and pancreatic duct Adverse health effects alkaptonuria the accumulation of alkapton in the body kidney stones, damage to cartilage recessive allele cystic fibrosis causes the body to produce thick, sticky mucus that clogs the lungs infections; blocks the release of enzymes from the pancreas recessive allele galactosemia the inability to digest galactose infants experience jaundice, failure to thrive, vomiting, and diarrhea; may lead to death if undiagnosed recessive allele hemophilia body cannot form blood clots excessive bleeding recessive allele Lesch–Nyhan syndrome buildup of uric acid in the body gout, kidney problems, self-injuring behaviour recessive allele phenylketonuria accumulation of phenylalanine in blood poor mental development and growth, weak tooth enamel recessive allele Tay–Sachs disease nerve cells in the brain are affected by the accumulation of gangliosides deterioration of muscle and physical abilities recessive allele Huntington’s disease progressive, irreversible degeneration of nervous system loss of muscle control and cognitive abilities dominant allele hypercholesterolemia high levels of cholesterol accumulate in the blood premature heart disease dominant allele neurofibromatosis nerve cells grow tumours tumours may be harmless or may cause damage by pushing on other nerves dominant allele 26 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 26 Mechanism of Inheritance Disorder posted to 2nd pass folder 9-1-10 NEL 9/1/10 11:02:34 AM Ontario’s Newborn Screening Program In Ontario, newborns are currently screened for at least 28 genetic disorders. These disorders include cystic fibrosis, a number of metabolic disorders such as PKU, blood disorders including sickle-cell anemia, and disorders of the endocrine system. Even babies from families with no known history of these rare disorders are at risk. Each year more than 140 000 newborns are tested, and of these, approximately 150 test positive for one of these rare genetic disorders. A positive result indicates the baby may have a genetic disorder. Only further genetic testing will confirm the presence or absence of a disease. Babies with one of these disorders often appear normal at birth but without early diagnosis may suffer irreversible damage and even death. Early diagnosis enables doctors to begin treatments that may eliminate or reduce serious health conse-quences and even prevent infant death. 5.5 Summary • Cystic fibrosis is a common, fatal disease passed on through a recessive mutated gene. typo? I don't know what a genetic • Genetic counsellors construct pedigree charts and interpret results of genetic background is. tests for individuals who do not have a genetic background. • Genetic screening is a means by which the presence of a mutated copy of a gene can be detected. • Individuals who have the BRCA1 or BRCA2 gene have a higher chance of developing breast cancer. • Ontario’s newborn screening program is used to test for many genetic disorders, including phenylketonuria and cystic fibrosis. 5.5 Questions 1. What factors may shorten the lives of people who have cystic fibrosis? K/U 2. Some people with cystic fibrosis find that athletic exercise helps their condition and keeps them in better health. Research and compare the stories of some people with CF C A who have become notable athletes. 3. Why is it important for infants to be genetically screened for PKU (phenylketonuria) at birth? K/U 4. Choose one of the disorders listed in Table 2. Use the Internet to research the following aspects of the disorder: A (a) symptoms (b) frequency of the disorder in the general population or a specific population (c) research currently being conducted (d) existence of any genetic tests or screening mechanisms available for the disorder (e) treatment of the disorder 5. Does the presence of a defective BRCA1 or BRCA2 gene in a woman’s genes guarantee that she will develop breast cancer? Why or why not? K/U 6. Using your guidance department, the Internet and other sources, research the educational background an individual C must have in order to become a genetic counsellor. A 7. Conduct research online to learn more about the Newborn K/U Screening Ontario (NSO) program. (a) Where in Ontario are the actual genetic tests conducted? (b) In addition to helping the newborn, for what other purposes can NSO results be used? (c) How old is the baby when the blood sample is taken? (d) The NSO program is mandatory for all newborns. Why do you think this policy was put in place? 5.5 Genetic Disorders 27 NEL 7380_Ch05_pp002-045.indd 27 go to n els on s c i en c e posted to 2nd pass folder 9-1-10 8/31/10 4:34:52 PM 5.6 Explore an Issue in Genetic Screening Skills Menu •Defining the Issue •Researching •Identifying Alternatives •Analyzing the Issue •Defending a Decision •Communicating •Evaluating Who Decides? Who Wants to Know? Anyone could be a carrier of a genetic disorder. Every person has alleles that produce defective proteins, but most of these defective proteins do not harm us. Depending on their family history, some people might want to use gene testing to find out if there is anything in their DNA that might turn up later in life as a genetic disorder. The results of genetic tests might cause people to make life-altering changes, so the decision to have a predictive gene test can be very complicated. A negative gene test may bring relief. For example, consider individuals at risk of developing Huntington’s disease. If they find out that they do not carry the Huntington gene, they will be free of the worry of developing the disease or passing it on to their children. However, if a test for Huntington’s disease turns out positive, they may be in a better position to plan for the remaining years of their life financially, socially, and emotionally. In our society now, the decision to have a genetic test is personal. But what if genetic testing was prescribed and law enforcement agencies, employers, schools, and adoption agencies all had access to medical files on a “need to know” basis? What if notinsurance, sure weoruse scenarios - we just offer you could be turned down forI'm a job, adoption based on a genetic test? How much information should readily available Maybe about an individual’s genetic proa be few examples. replace with issues file, and who should have access to it? Does the average person understand enough or "factors" or "situations" about basic genetic principles to know how to interpret and apply information about someone’s DNA? In this activity, you will explore different scenarios involving privacy and access to genetic information issues. At present in Canada, no regulation exists on the use of genetic information for purposes other than criminal investigations. Yet, in the future it is plausible that an individual’s genetic information could be used for other purposes. What if DNA testing was required for a marriage licence? If one of the partners is carrying a lethal allele such as the Huntington gene, should the other partner be told? The questions posed here may seem farfetched in today’s society. Yet society will be asked to consider such privacy questions in the future. The Issue The ethics of legal access to and ownership of DNA information needs to be considered carefully as technology for collecting and testing DNA for genetic disorders increases. Who decides? Who wants to know? Who should know? And who should be required by law to tell? You are part of a committee that has been asked to compile a list of guidelines for a government task force that will eventually use your guidelines to compose “Access to Genetic Information” legislation. The committee consists of the following people: • a person whose parent has Huntington’s disease but does not want to be tested himself • a person whose future mother-in-law has Parkinson’s disease • an airline executive who is advocating for the genetic testing of all current and future pilots • the president of a firm that conducts genetic tests • a physician who advocates for genetic testing on the basis of preventive medicine • half of a couple who wants to adopt a child 28 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 28 posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:34:52 PM Goal To create a set of guidelines and recommendations for access to genetic information Research Work in pairs or in small groups to learn more about genetic screening in Canada. Research these questions: • Which genetic disorders can be treated early if detected by genetic screening? web Link • Compile a list of companies in Canada that offer genetic testing. What tests are offered and at what cost? Does medical insurance cover the costs of those To start your research into these tests? questions, typo? Why to would you test parents or a • What guidelines or laws currently exist in Canada with respect to access go t o n els on s c i en c e pregnant woman? Did we mean children, genetic information? Identify Solutions You may wish to consider the following issues: fetuses? We already said that the newborn testing program "is" the law in Ontario so perhaps we should cut this? • Parenting: Should parents be able to test their children for any genetic disorder regardless of evidence of risk? Should parents, or pregnant women, be required by law to be tested for genetic disorders? • Relationships: Should people have access to a potential partner’s genetic information? What if your partner is going to develop Huntington’s disease? Should you have the legal right to know? If you are carrying a lethal gene, should the law require you to disclose this information to your prospective spouse? • Employment: Should prospective employers have access to genetic information about an applicant? If so, how much of this information should be used to determine eligibility for employment? For example, should an airline be able to screen its pilots for a gene that may cause heart attacks? What if the test is later proven to be less accurate than originally thought? Make a Decision Create a list of recommendations or guidelines that your committee recommends with respect to the issue. Provide rationale for each guideline and identify any stakeholders. Communicate In an oral presentation, present your committee’s recommendations to the government task force. Your recommendations should be supported by your rationale as well as research. Remember that your audience is made up of individuals who may Learning Tip Making Decisions as a Group Before you come to any decisions as a group, make a list on chart paper of pros and cons for the question at hand. Place the chart paper where all group members can see and have access to it. This can be helpful in forming new thoughts and ideas about the discussion at hand. During a brainstorming session like this one, take an accepting attitude of all the ideas presented to the group. Wait until the page is full to critique the ideas. Plan for Action Tests for screening for prostate cancer and breast cancer are considered one of the triumphs of genetic testing. The Prostate Cancer Research Foundation of Canada and the Canadian Breast Cancer Foundation both recommend early screening. • Screening for breast cancer and prostate cancer can result in fewer deaths. Find out what each foundation recommends with respect to age and frequency of screening. Choose a type of cancer. Design and produce a pamphlet that could be used to educate people on the importance of screening for that specific cancer. Consider making a number of copies of the pamphlet and distributing them to your parents, aunts, uncles, and other people in your life who would benefit from the information you have compiled. • What tests are conducted to screen for each of these cancers? How do the tests work? How effective are they in preventing deaths? 5.6 Explore an Issue in Genetic Screening 29 NEL 7380_Ch05_pp002-045.indd 29 posted to 2nd pass folder 9-1-10 8/31/10 4:34:52 PM 5.7 Multi-trait Inheritance As you have learned, Mendel’s monohybrid crosses were based on one characteristic controlled by one gene such as height (tall or dwarf) or seed shape (round or wrinkled) in a pea plant. As far as we currently know, genetic disorders such as cystic fibrosis and Huntington’s disease each involve only one gene. What happens when more than one characteristic is involved in a cross? Gregor Mendel asked such a question and then conducted ex-periments to determine the answer. Dihybrid Crosses and the Law of Independent Assortment dihybrid cross a cross that involves two genes, each consisting of heterozygous alleles Mendel focused on two characteristics: seed shape and seed colour. Recall that the dominant allele for seed shape is round (R) while the recessive allele is wrinkled (r). The dominant allele for seed colour is yellow (Y), while the recessive allele is green (y). Mendel crossed two individuals that were heterozygous for seed shape (Rr) and seed colour (Yy). A cross between two individuals for two pairs of heterozygous alleles is called a dihybrid cross. In this case the individuals were both RrYy. Figure 1 shows how Mendel used true-breeding parent plants to produce plants (the F1 generation) that were heterozygous for these two traits. He then used these F1 plants to perform a dihybrid cross. C05-F37-OB11USB round, yellow RRYY parent genotypes alleles in gametes Since this is all about dihybrid crosses I think the caption should be about the fact that this is how Mendel produced the dihybrids for the cross. This is in the text but not mentioned at all in the very long caption. RY RY ry RrYy RrYy ry RrYy RrYy rryy wrinkle, green Figure 1 Mendel’s parent phenotypes were true-breeding varieties. One parent plant was homozygous dominant round and yellow seed (RRYY ). The other parent plant was homozygous recessive wrinkled and green seed (rryy ). The gametes of one parent are RY,OUCH and the gametes - not ofclose on this the other parent are ry. The genotypes of the offspring are heterozygous for both traits (RrYy ), so one! Where did this come the F1 phenotypes are all round yellow seeds. Why does the insertion say "on the next page" when it is right here? from? on the next page Here is a crude replacement version. It is missing the "arrow heads" which are needed. law of independent assortment if genes are located on separate chromosomes, It might work to colour they willbetter be inherited independently of code each letter and keep all each other A heterozygous individual for two characteristics will produce four possible gametes. A parent that is RrYy can generate the possible gametes RY,Not Ry, rY, andwhere ry. You to begin sure will see in Figure 2 that the alleles of the two genes—R and r, and Y and y—separate there is ONE parent independently during the formation of the gametes. This is called Mendel’s law of indecontaining all four alleles in pendent assortment. Each allele is independent of the other, and no two alleles are linked everyfour cell. to each other. The alleles are found on different chromosomes, creating diffNO erentneed for four spheres of different colours. gametes in different combinations of the four alleles (R, r, Y, y). R the arrows black. Ontario Biology 11 U SB 0176504311 FN CO C05-F37-OB11USB Crowle Art Group R Y R r y Y r VERY misleading. y parent Y There are FOUR possible gametes - each with two letters - one of each type. gametes r y C05-F38-OB11USB 30 Figure 2 A pea plant that is heterozygous for both seed shape and seed colour can produce four is drawn They way this 2nd pass Pass different possible gametes. The four gametes encompass all the possible combinations. There students willarethink that each Approved four possible combinations (RY, Ry, rY, and ry), and all are equally likely. lower letter represents a Not Chapter 5 •Approved Mendelian Genetics—Patterns of Inheritance nel 7380_Ch05_pp002-045.indd 30 gamete! posted to 2nd pass folder 9-1-10 8/31/10 4:34:52 PM Mendel crossed numerous heterozygous F1 generation plants. He then counted the F2 offspring and noticed that the characteristics were not linked. He noted that although the original parents (or “grandparents” of the F2 generation) were either round yellow or wrinkled green, the F2 offspring characteristics were of every combination possible, including round green and wrinkled yellow. It appeared that the inheritance of seed shape had no influence over the inheritance of seed colour. Four distinct combinations of seeds were produced in a 9:3:3:1 ratio (Figure 3). The alleles that control these two characteristics assort themselves independently. C05-F39-OB11USB Cross: Rr Yy Rr Yy Note that if we stick with the horrid heavy bold lines then we would MUST add two more lines at top and side since these lines are separating gametes. Gametes (pollen) RY Ry rY ry RR YY RR Yy Rr YY Rr Yy RY The second "usual" genotype (matching this punnett square pattern) would be GGRR, GGRr . . . Ry Gametes (eggs) RR Yy RR yy Rr Yy Rr yy Rr YY Rr Yy rr YY rr Yy Rr Yy Rr yy rr Yy rr yy rY LEARNING TIP But I think I would only list the first Gene. Order one ry When completing the Punnett square for a dihybrid cross, keep the genes in alphabetical order and write the dominant alleles (capital letters) first, for example GGRR, GgR. Figure 3 A summary of the dihybrid cross—9 round yellow seeds, 3 round green, 3 wrinkled yellow, and 1 wrinkled green. A dihybrid cross results in a phenotypic ratio of 9:3:3:1. Tutorial 1 Solving Dihybrid Cross Problems use version based on my sample A dihybrid cross is an extension of a monohybrid cross. It involves two genes and up to four alleles. Sample Problem 1: Determining the Phenotypic Ratio In watermelons, the green colour gene (G) is dominant over the striped colour gene (g), and round shape (R) is dominant over long shape (r). A heterozygous round green colour (GgRr) watermelon plant is crossed with another heterozygous round green colour (GgRr) plant. Determine the expected phenotypic ratio of the F1 generation. Ontario Biology 11 U SB Step 1. Determine the possible gametes from each parent. 0176504311 Each parent is heterozygous for green colour and round C05-F39-OB11USB FN shape (GgRr). The alleles assort independently of each other. Four different gametes are produced (Figure 4). Crowle Art Group CO Pass Approved Not Approved G R G g R r G r g R Figure 4 parent g r gametes C05-F40-OB11USB How is a student expected to see FOUR gametes here?? 2nd pass 5.7 Multi-trait Inheritance NEL 7380_Ch05_pp002-045.indd 31 posted to 2nd pass folder 9-1-10 31 9/1/10 11:09:28 AM include a "sampling" of arrows to help guide students Step 2. Draw a Punnett square of the dihybrid cross. Since there are four possible gametes from each parent, draw a 4 3 4 grid, with the possible gametes from one parent across the top and the possible gametes from the other parent down the left-hand side (Figure 5). GR Gr gR gr GR Gr gR gr GR GGRR GGRr GgRR GgRr Gr GGRr GGrr GgRr Ggrr gR GgRR GgRr ggRR ggRr gr GgRr Ggrr ggRr ggrr GR Gr gR C05-F42-OB11USB Figure 6 Step 4. Compile a list of plants that have the same phenotypes. gr Start with plants that will exhibit both dominant characteristics, followed by plants that are dominant for only one of the characteristics, and then finally with plants that are recessive for both characteristics. C05-F41-OB11USB Figure 5 green and round: GGRR, GGRr, GgRR, GgRr, GGRr, GgRr, GgRR, GgRr, GgRr (underlined in Figure 6) Step 3. Execute the cross. Be careful when combining alleles. Work systematically across a row while keeping track of which four alleles will go into each square. Pair up the alleles for the same gene, as shown in Figure 6. total 5 9 green colour and long: GGrr, Ggrr, Ggrr total 5 3 striped and round: ggRR, ggRr, ggRr Ontario Biology 11 U SB 0176504311 C05-F42-OB11USB FN Crowle Art Group CO Pass Approved Not Approved U SB -F41-OB11USB wle Art Group pass total 5 3 striped and long: ggrr total 5 1 Ditto - ratio these all must be Therefore, the phenotypic is 9:3:3:1 for a dihybrid replaced. Same idea as cross. 2nd pass before. Sample Problem 2: Examining a Homozygous Cross Assume that in guinea pigs, black fur (B) is dominant over white fur (b), and a rough coat (R) is dominant over a smooth coat (r). If a black, rough-furred guinea pig that is homozygous dominant for both traits (BBRR) is crossed with a white, smooth-furred guinea pig (bbrr), what are the expected phenotypes in a large litter? Step 1. Determine what the gametes will be from each parent. Parent One is homozygous dominant for black and rough fur (BBRR). The only gamete that this individual can produce is BR (Figure 7(a)). Parent Two is homozygous recessive for white colour and smooth fur (rrbb). The only gamete that this individual can produce is br (Figure 7(b)). 32 B B (a) R B b Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 32 R R R B R parent 1 B R gametes C05-F43a-OB11USB b b r (b) Figure 7 B posted to 2nd pass folder 9-1-10 b r r r b r parent 2 b r gametes C05-F43b-OB11USB NEL 9/1/10 11:02:37 AM Step 2. Cross the gametes using a Punnett square. All of the offspring will be heterozygous for black and rough fur in any size litter. BR br BbRr Figure 8 C05-F44-OB11USB Practice 1. In some breeds of dogs, a dominant allele controls the characteristic of barking (B) while on a scent trail. The allele for non-barking trailing dogs is (b). In these dogs an independent gene (E ) produces erect ears that is dominant over drooping ears (e). For each of the following mating situations, calculate the phenotypic ratio of the offspring: (a)A non-barking trailer with erect ears (heterozygous) is mated with a heterozygous barking trailer with drooping ears (bbEe 3 Bbee). (b)A non-barking trailer with drooping ears is mated with a heterozygous barking trailer with drooping ears (bbee 3 Bbee). (c)A heterozygous barking trailer with heterozygous erect ears is mated with a heterozygous barking trailer with heterozygous erect ears (BbEe 3 BbEe). (d)A heterozygous barking trailer with heterozygous erect ears is mated with a non-barking trailer with drooping ears (BbEe 3 bbee). Probability Genetic ratios are probabilities. Recall that if a cross occurs between two heterozygous individuals where one of the alleles is dominant, such as widow’s peak (Ww 3 Ww), the phenotypic ratio is 3:1. The total number of possible events is four, and the prob1 ability of producing an individual without a widow’s peak (ww) is , or 25 %. Similarly 3 4 the probability of producing an individual with a widow’s peak is , or 75 %. 4 U SB Many THE PRODUCT LAW 5-F44-OB11USB owle Art Group d pass Since only one type of gamete is supplied by each parent, only a 1 3 1 grid is needed (Figure 8). Practice Makes Perfect To take a dihybrid cross quiz, go t o n els on s c i en c e Genetic events occur independently of one another. A couple has a 50 % chance of producing a boy for their first child. The probability of having a boy as a second child is also 50 %, because the sex of the second offspring is not affected by the sex of the first. When two events are independent of each other, the probability that both events will occur can be calculated using the product law. The product law states that the probability of two or more outcomes occurring is equal to the product of their indi1 1 1 vidual probabilities. The probability of giving birth to two boys is 3 5 . Therefore, 2 2 4 there is a 25 % (50 % 3 50 % 5 25 %) chance of having two boys or, conversely, two girls. Recall that in a dihybrid cross the phenotypic ratio is 9:3:3:1. Consider Mendel’s work with heterozygous yellow seeds crossed with heterozygous yellow seeds 9 (RrYy 3 RrYy). The probability of producing a round yellow seed is (about 56 %). 16 You know that the alleles of seed colour and seed shape are independent of each other. If a cross is conducted between two heterozygous yellow seed plants (Yy), the prob3 ability of producing a yellow seed plant is (75%). If a cross is conducted between 4 two heterozygous round seed plants, the probability of producing a round plant is product law the probability of two random events occurring simultaneously is the product of the individual probabilities of each event 5.7 Multi-trait Inheritance 33 NEL 7380_Ch05_pp002-045.indd 33 web Link posted to 2nd pass folder 9-1-10 8/31/10 4:34:55 PM 3 (75%).Using the product rule, the probability of producing a round yellow seed plant 4 3 3 9 from a cross between two heterozygous round yellow seed plants is 3 5 . 4 4 16 The probability predicted by the product law is the same probability that is predicted by a dihybrid Punnett square. The product law also holds true for the other three probabilities in a dihybrid cross (Table 1). Table 1 Using the Product Law to Determine Probabilities of a Dihybrid Cross When Both Genes are Heterozygous Learning Tip Sample Size Note that Mendel observed these ratios only because of his large sample size. He crossed hundreds of plants, producing thousands of offspring. As sample size increases, the closer the experimental (actual) probability gets to theoretical (expected) probability. discontinous variation when the expression of the products of one gene has no bearing on the expression of the product of a second gene continuous variation when the product of one gene is affected by the product of another gene, the gene products may be additive, or one product may negate another product additive allele the product of the allele comprises one part of the total for a phenotype Round or wrinkled seed: probability from monohybrid cross Yellow or green seed: probability from monohybrid cross Round seed (Rr 3 Rr ) 3 5 75 % 4 Yellow seed (Yy 3 Yy ) 3 5 75 % 4 round, yellow seed (RrYy 3 RrYy ) 3 3 9 3 5 4 4 16 75 % 3 75 % 5 56.25 % round seed (Rr 3 Rr) 3 5 75 % 4 green seed (Yy 3 Yy) 1 5 25 % 4 round, green seed (RrYy 3 RrYy) 3 1 3 3 5 4 4 16 75 % 3 25 % 5 18.75 % wrinkled seed (Rr 3 Rr) 1 5 25 % 4 yellow seed (Yy 3 Yy) 3 5 75 % 4 wrinkled, yellow seed (RrYy 3 RrYy) 1 3 3 3 5 4 4 16 25 % 3 75 % 5 18.75 % wrinkled seed (Rr 3 Rr) 1 5 25 % 4 green seed (Yy 3 Yy) 1 5 25 % 4 round, green seed (RrYy 3 RrYy) 1 1 1 3 5 4 4 16 25 % 3 25 % 5 6.25 % Discontinuous versus Continuous Variation In Mendel’s work with pea plants, the genes that control two characteristics did not interact with each other. This is the result of discontinuous variation. Pea plants were tall or short, and seeds were yellow or green. There were no in-between values. As you no doubt have noticed, there are many examples in nature where this is not the case. Continuous variation is when the phenotypic variation is not clear cut. For example, in the general population there are many variations of skin colour, from pale white to dark black. This is because skin colour is not controlled by one gene, but rather by three or more separately inherited genes from the father and mother. The genes are on different autosomal chromosomes and their interaction is additive. An additive allele contributes a set amount to a phenotype and is an example of continuous variation. The colour of a person’s skin varies depending on which combination of six alleles he or she inherit from parents. Each allele makes its own contribution and exhibits incomplete dominance. Other alleles may also play a role. For example, alleles for freckles and red hair have a role in determining skin colour. Other traits that are under the control of additive alleles are height, hair colour, and eye colour. Continuous variation explains the substantial variation of phenotypes found in nature. 34 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 34 Dihybrid cross probability See Over matter posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:34:56 PM 5.7 Summary • Dihybrid crosses are crosses between individuals who differ in two pairs of alleles; if the individuals are heterozygous for both alleles, the phenotypic ratio of the offspring is 9:3:3:1. • Mendel’s law of independent assortment states that alleles of different genes separate into gametes independently of each other. • Probability is a measure of chance. As sample size increases, the actual probability approaches the expected probability. • The probability of two independent events occurring at the same time may be calculated using the product law. • Punnett square ratios are one way to show probability. • Discontinous variation occurs when a trait is either expressed or is not. There is no in-between trait. • Continuous variation occurs in nature when the expression of a characteristic is a sum of the expression of all alleles involved. Skin colour and height are examples of continuous variation. ok - but best to avoid asking section based on info from an 5.7 questions Questions investigation that might not have been 1. State Mendel’s law of independent assortment. Provide an completed. example that illustrates the law. K/U 2. List the possible gametes from the following individuals: (a) a widow-peaked (heterozygous), attached-earlobe individual (b) a free-lobed (heterozygous), albino individual (c) a dwarf, yellow seed colour (homozygous) pea plant K/U 3. Assume that curly hair (C ) is dominant to straight hair. Albinism (P ) is recessive to normal skin pigmentation. A woman who is heterozygous for curly hair and albinism has a child. The father is homozygous dominant for curly hair and has albinism. Determine the possible phenotypes for their child. What is the probability that the child will be male for each phenotype? T/I typo 4. - reword. sure in the intent. You What is thenot probability Question 3 that the are child not will a male express "for" aalbinism phenotype. and have curly hair like his father? T/I 5. In your own words, differentiate between continuous and Wording if very difficult discontinuous variation.here K/U - to be perfectly clear. Do you mean? 6. Assume that in horses, black coat colour is dominant (B) to chestnut colour (b). The trotting gait is due to a dominant Calculate different of a(t). T/I allelethe (T ), four and the pacing gateprobabilities is a recessive allele child being both a trotting male horses and of (a) If two black areeach mated and have four offspring, all of which are black and pacing, what does phenotype? the literacy folks might not like this. An ELL student might not know the "horse" meaning of trot, pace, stud, mare, or even colt. that reveal about the probable genotypes of the parent horses? (b) A stud is black and trotting. He is mated with a mare who is also black and trotting. Their colt is black and pacing. The same stud is mated to a second mare who is chestnut and pacing. Their colt is chestnut and trotting. What is the probable genotype(s) of the stud, Mare 1, Colt 1, Mare 2, and Colt 2? 7. Design an experiment in which you could determine whether height in tomato plants is governed by continuous variation or discontinuous variation. T/I 8. The alleles for human blood types A and B are codominant, but both are dominant over the type O allele. The Rh factor is separate from the ABO blood group and is located on a separate chromosome. The Rh+ allele is dominant over the Rh–. Indicate the possible phenotypes from mating a woman with type O, Rh–, with a man with type A, Rh+. The man is homozygous for type A and heterozygous for Rh factor. T/I Don't they have to be if they are 9. Why is sample part size important in a geneticcross? investigation? A of a trihybrid 10. Is it possible to have a trihybrid cross? If so, how many possible gametes would be formed if the parents were heterozygous for each of the three characteristics? T/I This is quite challenging given the examples we have provided. I think we need to at least begin with a much easier question. OM34 Over matter 7380_Ch05_pp002-045.indd 34 posted to 2nd pass folder 9-1-10 8/31/10 4:34:56 PM CHAPTER 5 Investigations Investigation 5.2.1 OBSERVATIONAL STUDY Gummy Bear Genetics Mendel derived his laws of inheritance by counting the number of different types of offspring that resulted from different crosses of peas, and then analyzing the results. Using a large sample size provided Mendel with enough data to see trends. The trends in the data led to the development of Mendel’s law of inheritance. In this investigation you will be given a sample of “offspring” from a Mendelian monohybrid cross. By sorting and counting the number of offspring, you will be able to determine the genotypes of the parents that produced the offspring. purpose To determine the genotypes of parents by counting and sorting the phenotype ratios of the offspring equipment and Materials • alabelledbagcontaininggummybears Caution: This is a laboratory procedure. Food is not to be eaten in the laboratory. procedure SKILLS HANDBOOK T/k 1. Copy Table 1 into your notebook. Table 1 Phenotype Ratios of Gummy Bears in Individual Bags Total number Phenotypes Monohybrid of Phenotype Parental gummy and cross bag numbers ratio Genotypes cross bears label A B •Questioning •Researching •Hypothesizing •Predicting •Planning •Controlling Variables •Performing •Observing •Analyzing •Evaluating •Communicating Analyze and evaluate (a) For each bag, calculate the phenotype ratio of bears in the bag. Record this ratio in Table 1. T/I (b) Determine which bear colour is dominant and which bear colour is recessive. Use T to represent the dominant allele and t to represent the recessive allele. Hint: look at the phenotype ratio of Bag C. T/I (c) Use the ratios and your knowledge of Mendelian genetics to determine the likely genotype(s) of each type of bear found in the bags. Record these genotypes in Table 1. T/I (d) Determine the genotypes of the parents that produced the offspring in each of the bags. Record this information in Table 1. T/I (e) For each bag, draw a Punnett square to show that the cross of the genotypes you predict for the parents will produce the ratio that you observed. T/I Apply and extend (f) Why is having a large number of gummy bears in each bag important? T/I (g) Pool your class data in Table 2. T/I Table 2 Phenotype Ratios of Gummy Bears—Class Results Total number Phenotypes Monohybrid of Phenotype Parental gummy and cross bag numbers ratio Genotypes cross bears label A C B 2. Obtain a bag of gummy bears from your teacher and record the letter label of the bag. 3. Empty the contents of the bag onto your desk. Count the gummy bears and record the total in Table 1. 4. Sort the gummy bears into groups based on phenotype differences that can be easily observed and quantified, such as colour. 5. Count and record the number of bears of each phenotype in Table 1. 6. Repeat Steps 2 to 5 for each of the different (A, B, C, . . .) bags available from your teacher. C (h) Why are the ratios not exactly the same as Mendel’s ratios? T/I (i) What type of inheritance does each of the three monohybrid crosses represent? T/I (j) Design a set of bags that would represent the phenotype ratios found in crosses that involve alleles that exhibit incomplete dominance. What colour of gummy bears would you use? How many of each? What type of cross would you execute? T/I A 5.7 Chapter Multi-trait 5 Investigations Inheritance nel 7380_Ch05_pp002-045.indd 35 SkILLS MenU posted to 2nd pass folder 9-1-10 35 8/31/10 4:34:58 PM Investigation 5.4.1 OBSERVATIONAL STUDY Skills Menu •Planning •Observing ?? something wrong here - there •Questioning •Researching •Controlling •Analyzing My Genetic Profile is NO place to fill in anything •Hypothesizing Variables •Evaluating •Performing •Communicating about genotype in table 1. There •Predicting The individuals of every population have a variety of is no provided dominant phenotypes. These variations are a result of genotypic genotype.ofI different would simply cut #2 variance caused by the inheritance alleles. The 2. Fill in the missing genotypes for each characteristic entirely not needed. presence or absence of an allele inherited according to the in Table 1. The homozygous dominant genotype has Mendelian laws of inheritance can be followed through been provided already. many generations with aOddly pedigree chart. as well since worded 3. Using the information in Table 1 as a guide, draw In this activity, you will identify your phenotype for characteristics do not have and complete a data table similar to Table 2 that lists six characteristics and use those observations to try to genotypes - individuals with all 8 characteristics. If, for a particular trait, you do determine the associated genotypes. Then, you and a not know whether you are homozygous dominant specific traits/phenotypes have partner will determine the phenotypes and genotypes or heterozygous, simply record your genotype as genotypes. offspring and for possible first- and second-generation heterozygous. construct a pedigree chart. Table 2 Determining Your Genotype Purpose To determine your phenotype and genotype for a characteristic To track allele inheritance through three generations Characteristic Phenotype Possible genotype(s) Genotype dimples earlobes Equipment and Materials • scissors • beakers • coloured pencils (green and red) Characteristic Possible Dominant phenotypes and phenotype associated allele dimples present (D) absent (d ) earlobes freely hanging (F ) attached (f ) hair on mid-finger hair present (H ) hair absent (h) 2nd toe longer than big toe longer (L) shorter (l ) hairline widow’s peak (W ) straight (w ) Part B: The F1 Generation Now you will work with a partner to simulate the passing on of genetic information to a single offspring. For this activity, ignore gender. 4. Copy Table 3 into your notebook, with rows for all 8 characteristics. 5. To determine the genetic makeup of the offspring, you and your partner (Parent 1 and Parent 2) must each contribute a single allele for each characteristic. To choose each allele, you must make 8 coin flips—one for each characteristic. If you flip “heads,” you contribute the first allele of your genotype; if you flip “tails,” you contribute the second allele. For example, if you flip heads for “thumb flexibility” and you are Tt, then you enter T under your parent column in Table 3. 6. After you have determined the alleles for each characteristic, complete the genotype and phenotype columns in your table. tongue roll roller (R) non-roller (r ) Table 3 Genotype and Phenotype of F1 Generation Offspring thumb flexibility bent back (T ) straight (t ) thumb placement with hands clasped left thumb on top (P ) right thumb on top (p) Procedure Part A: Determining Your Genotype 1. Copy Table 1 into your notebook. simply headings Table 1 Genotypes for Some Common Human Phenotypes Recessive phenotype Allele from Characteristic Parent 1 Allele from Parent 2 Genotype Phenotype dimples earlobes 36 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 36 posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:34:58 PM Part C: The F2 Generation Now you will simulate the mating of your offspring with the offspring of another pair of students. 7. Repeat Step 5 to model the contribution of alleles from the two F1 offspring and determine the genotype and phenotype of their F2 offspring—your “grandchild” in this simulation. Record your data in a new copy of Table 3 titled “Genotype and Phenotype of F2 Generation Offspring.” 8. Choose any single trait in your grandchild and draw a pedigree chart to track its inheritance over the three generations. Be sure to include all four grandparents and both parents in the chart. (c) Look at your table of genotypes and phenotypes. How many of your 8 traits are recessive? T/I (d) Look at your partner’s table. How many of his or her 8 traits are recessive? T/I (e) How did the number of recessive traits in your offspring compare with that of yours as “parents.” Did this surprise you? What factors might account for these differences? T/I (f) Write a birth announcement for one of your offspring. List the baby’s characteristics. T/I C Apply and Extend (g) Tally the class results and calculate the percentage of traits that were recessive for the class as a whole. T/I Analyze and Evaluate represents an event in (h) Do the same tally for the F1 and F2 generations. How (a) In this activity, which step(s) represent meiosis? Is did the percentage of recessive traits compare across this a true representation? Why or why not? T/I all three generations. Is there any convincing evidence (b) Use examples from the activity to explain your that recessive traits will become more or less common understanding of the terms “genotype,” “phenotype,” with time? Explain your reasoning. T/I C A “recessive,” and “dominant.” T/I C may be just replace with . . . I think we need to delete (or replace) H. Based on the class data, do you think dominant phenotypes are always more or always less common than their corresponding recessive phenotypes? Use examples to support your answer. Students will ALWAYS get skewed data because every time a student has a dominant trait they will have recorded their genotype as heterozygous. This is necessary for the activity but creates a data bias which will result in more recessives in the F1 than would otherwise be expected. The F2 data will also have more recessives than the P1, but will be valid based on the skewed F1. Chapter 5 Investigations 37 NEL 7380_Ch05_pp002-045.indd 37 posted to 2nd pass folder 9-1-10 8/31/10 4:34:58 PM CHAPTER 5 SUMMArY Summary Questions 2. Look back at the Starting Points questions at the beginning of the chapter, on page xxx. Use examples from the chapter to answer the questions again. Compare your latest answers to your initial answers. Note how your answers have changed. 1. Look back at the Key Concepts listed at the beginning of the chapter, on page xxx. Create a graphic organizer with the word “inheritance” in the middle to organize the main ideas and concepts presented in this chapter. vocabulary trait (p. xx) homozygous (p. xxx) codominance (p. xxx) tumour supressors (p. xxx) true-breeding organism (p. xxx) heterozygous (p. xxx) pedigree (p. xxx) pheynylketonuria (p. xxx) hybrid (p. xx) genotype (p. xxx) autosomal inheritance (p. xxx) dihybrid cross (p. xxx) cross (p. xxx) phenotype (p. xxx) sex-linked (p. xxx) P generation (p. xxx) dominant allele (p. xxx) X-linked (p. xxx) law of independent assortment (p. xxx) F1 generation (p. xxx) recessive allele (p. xxx) Y-linked (p. xxx) product law (p. xxx) monohybrid (p. xxx) Punnett square (p. xxx) cystic fibrosis (p. xxx) discontinuous variation (p. xxx) monohybrid cross (p. xxx) probability (p. xxx) mutation (p. xxx) continuous variation (p. xxx) F2 generation (p. xxx) test cross (p. xxx) carrier testing (p. xxx) additive allele (p. xxx) law of segregation (p. xxx) complete dominance (p. xxx) genetic screening (p. xxx) allele (p. xxx) incomplete dominance (p. xxx) cancer (p. xxx) career pATHWAYS Grade 11 Biology can lead to a wide range of careers. Some require a college diploma or a B.Sc. degree. Others require specialized or postgraduate degrees. This graphic organizer shows a few pathways to careers mentioned in this chapter. SKILLS HANDBOOK T/k more careers 1. Select two careers, related to Genetic Processes that youwe find need interesting. Research the here. educational pathways that you would need to follow to pursue these careers. What is breeder, involved in the required educational programs? Prepare aplant brief report of your fihorse ndings. trainer, market 2. For one of the two careers that you chose above, describegardener, the career, main duties and oncologist, pediatrician, responsibilities, working conditions, and setting. Also outline how the career benefits society insurance adjustor, demographer and the environment. laboratory technician M.Sc. B.Sc. 12U Biology Ph.D. research geneticist Canadian Association of Genetic Counsellors Acrcreditation B.A. OSSD 11U Biology registered nurse B.Sc.N. college diploma laboratory technician dog breeder 38 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 38 posted to 2nd pass folder 9-1-10 is this a program? If so it still needs to go t o n els on s c i en c e link to a career! nel 8/31/10 4:35:00 PM CHAPTER 5 SELF-Quiz K/U Knowledge/Understanding T/I Thinking/Investigation C Communication A Application [QUESTIONS TO COME] To do an online self-quiz, go to n els on s c i en c e Chapter 5 Self-Quiz 39 NEL 7380_Ch05_pp002-045.indd 39 posted to 2nd pass folder 9-1-10 8/31/10 4:35:00 PM CHAPTER 5 Review K/U Knowledge/Understanding T/I Thinking/Investigation C Communication A Application [QUESTIONS TO COME] 40 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 40 posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:35:00 PM Chapter 5 Review 41 NEL 7380_Ch05_pp002-045.indd 41 posted to 2nd pass folder 9-1-10 8/31/10 4:35:00 PM 42 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 42 posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:35:00 PM Chapter 5 Review 43 NEL 7380_Ch05_pp002-045.indd 43 posted to 2nd pass folder 9-1-10 8/31/10 4:35:00 PM 44 Chapter 5 • Mendelian Genetics—Patterns of Inheritance 7380_Ch05_pp002-045.indd 44 posted to 2nd pass folder 9-1-10 NEL 8/31/10 4:35:01 PM Chapter 5 Review 45 NEL 7380_Ch05_pp002-045.indd 45 posted to 2nd pass folder 9-1-10 8/31/10 4:35:01 PM