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Chapter 12 Notes - DNA and RNA 12–1 DNA A. Griffith and Transformation 1. Griffith’s Experiments 2. Transformation B. Avery and DNA C. The Hershey-Chase Experiment 1. Bacteriophages 2. Radioactive Markers D. The Components and Structure of DNA 1. Chargaff’s Rules 2. X-Ray Evidence 3. The Double Helix Name_______________ Date _______ Period __ What is DNA? Although the environment influences how an organism develops, the genetic information that is held in the molecules of DNA ultimately determines an organism’s _____________. DNA achieves its control by determining the structure of ________________. All actions, such as eating, running, and even thinking, depend on proteins called enzymes. Enzymes are critical for an organism’s function because they control the chemical reactions needed for life. Within the structure of DNA is the information for life—the complete instructions for manufacturing all the _______________ for an organism. How Replication Occurs 2.Many scientists have contributed to our current knowledge of DNA. ________________ studied material in nucleus and found it to be half protein and half DNA in 1868. In the 1900’s, Walter Sutton and Thomas Hunt Morgan showed that genes are the units of heredity and are located on _____________________ Griffith’s Experiment In 1928, Frederick Griffith conducted an experiment in which he was studying how pneumonia causing bacteria made people sick. Griffith injected ______ with four different samples of bacteria from the smooth and rough colonies. When injected separately, neither heat-killed, diseasecausing bacteria nor live, harmless bacteria killed the mice. The two types injected together, however, caused fatal pneumonia. Some factor from the ____ bacteria had “transformed” the harmless bacteria into disease-causing ones. From this experiment, biologists inferred that genetic information could be transformed from one bacterium to another. DNA or Proteins? But…. Griffith was unsure whether it was __________________________ that was being transformed. Almost 20 years later, (1944), Avery, MacLeod, and McCarty recreated Griffith’s experiment in order to determine if the transforming material was DNA or proteins. They discovered that the nucleic acid _______ stores and transmits the genetic information from one generation to the next. Avery, Macleod and McCarty published strong evidence that DNA was the transforming material, but not enough to convince everyone. Many scientists need several different experiments to convince them of a discovery of this importance. DNA is the genetic material In 1952, Alfred Hershey and Martha Chase performed an experiment using radioactively labeled viruses (_____________________________) that infect bacteria. These ____________ (phages) were made of only protein and DNA. The bacteriophages, or viruses, attach to the outside of bacterium, inject its genetic material into bacterium, take over its processes, and kill it while releasing new phages The Hershey- Chase Experiment To determine if the genetic material was DNA or protein, radioactive substances were used as markers. Hershey and Chase labeled the virus _____________ with a radioactive isotope (pink neon label) and the virus _______ with a different isotope (blue neon label). By following the infection of bacterial cells by the labeled viruses, they demonstrated whether it was DNA or protein that entered the cells and caused the bacteria to produce new viruses. 1 The bacteriophages injected only DNA into the bacteria, not proteins. From these results, Hershey and Chase concluded that the genetic material of the bacteriophage was ______. Genes… Scientists now knew that genes are made of _______. They also knew: o genes had to carry information from one generation to the next o genes had to put that information to work by determining the heritable characteristics of organisms o genes had to be easily copied, because all of a cell’s genetic information is replicated every time a cell _____________ Scientists now wanted to know more about the molecule DNA. The Components and Structure of DNA DNA is a polymer (long chain) made of repeating subunits called ______________. Nucleotides have three parts: a simple ________, a phosphate group, and a nitrogenous base. The simple sugar in DNA, called deoxyribose, gives DNA its name—deoxyribonucleic acid. The phosphate group is composed of one atom of phosphorus surrounded by four oxygen atoms. A nitrogenous _______ (nitrogen containing) is a carbon ring structure that contains one or more atoms of nitrogen. In DNA, there are four possible nitrogenous bases: ________ (A), guanine (G), cytosine (C), and thymine (T). Thus, in DNA there are four possible nucleotides, each containing one of these four bases. DNA Nucleotides Adenine and Guanine are in a group known as the ______________ (they are larger). Cytosine and ______________ are in a group called the pyrimidines (they are smaller). Nucleotides join together to form long chains, with the phosphate group of one nucleotide bonding to the deoxyribose sugar of an adjacent nucleotide. The phosphate groups and deoxyribose molecules form the backbone of the chain, and the nitrogenous bases stick out like the ___________ of a zipper. The nucleotides can be joined together in any order, meaning that any sequence of bases is possible. Chargaff’s Rule In the 1950’s Erwin Chargaff analyzed the amounts of four compounds in DNA (________________). Chargaff’s Rule: [A] = [T] and [G] = [C] He found that the amount of adenine is always equal to the amount of thymine, and the amount of guanine is always equal to the amount of cytosine. X-ray Evidence X-ray studies done in the 1950’s by Rosalind ____________ and Maurice Wilkins revealed the basic spiral (coiled double helix) structure of DNA. X-ray diffraction (crystallography) - x-rays pass through a crystal of a substance onto photographic film; molecules of substance scatter the x-rays in characteristic patterns o shows that the strands in DNA are __________ around each other like the coils of a spring, a shape known as a ____________ o angle of the X suggests that there are ________ strands in the structure o nitrogenous bases are near the center of the molecule 2 The Double Helix In 1953, Watson and Crick proposed that DNA is made of two chains of nucleotides (wound around each other) held together by nitrogenous bases (they used the Franklin’s x-ray pattern). Because DNA is composed of two strands twisted together, its shape is called _____________________. They discovered that _______________ bonds could form between certain nitrogenous bases and hold the two strands together. Because of the size of each of the bases, only adenine and thymine and guanine and cytosine could form bonds between them. This also, supported and explained _______________ rule. The Importance of Nucleotide Sequences The sequence of nucleotides forms the ___________ genetic information of an organism. The closer the relationship is between two organisms, the ________ similar their DNA nucleotide sequences will be. Scientists use nucleotide sequences to determine evolutionary relationships among organisms, to determine whether ______ people are related, and to identify bodies of crime victims. Prokaryotic Chromosome Structure Most prokaryotes, such as this E. coli bacterium, have only a ______ circular chromosome. This chromosome holds most of the organism’s DNA. Prokaryote vs. Eukaryote DNA Eukaryotes have as much as _________ times the amount of DNA as prokaryotes. Unlike prokaryotes that lack a nucleus, eukaryotic DNA is found in the ____________. Eukaryotic DNA is organized into chromosomes. The number of chromosomes can vary by organism. E. coli Bacterium Humans have ___ chromosomes Fruit flies have 8 chromosomes Giant Sequoia Trees have 22 chromosomes DNA Length Chromosome E. coli (bacteria in human colon) contains 4,639,221 base pairs Length = 1.6 mm; A typical bacterium is less than 1.6 μm in diameter DNA must be ____________ into a space only one one-thousandth of its length 1. 2. 3. 4. 5. 6. Chromosome Structure of Eukaryotes A chromosome is made up of a tangled mass of ____________ fiber. Each chromatin fiber is a __________ wound super coil. Each super coil is made up of coils. A coil, in turn, is a chain, of beadlike structures called ________________. Each nucleosome consists of _________ wound around proteins called histones. The strand of DNA is a double ___________ made up of nucleotides. 1. Chromosome 4. Nucleosome 6. DNA double helix 3. Coils 2. Supercoils 5. Histones 3 DNA Replication Background During most of the cell cycle, DNA is unwound, so that the chromosomes are ______ visible. During mitosis, the tightly packed chromosomes form in order to move more efficiently. Before cell division, DNA must make a copy of itself during S phase of __________________. This process is called DNA Replication. This process ensures that each resulting cell will have a ________________ set of DNA molecules. It is important that the new copies are exactly like the original molecules. Prokaryote vs. Eukaryote Replication During DNA replication, the DNA molecule separates into ________ strands. In most prokaryotes, replication begins at a single point in the chromosome and proceeds, often in two directions, until the entire chromosome is replicated. In the larger eukaryotic chromosomes, DNA replication occurs at _____________ of places at the same time. Replication proceeds in both directions until each chromosome is completely copied. The sites where separation and replication occur are called replication _______________. New strand Original strand DNA Replication DNA polymerase Growth DNA polymerase Growth Replication fork Replication fork New strand Nitrogenous bases Original strand Steps of DNA Replication 1. DNA Replication begins when the _______ strands separate as the hydrogen bonds that hold the base pairs together breaks. 2. This allows to the two strands to _________ and unwind. Because each original strand can be used to make a new strand, the strands are said to be complementary. 3. Each strand of the double helix of DNA serves as a ____________, or model, for the new strand. 4. The enzyme ________ polymerase helps free-floating nucleotides match up with their complementary bases on each of the exposed, original strand. Adenine pairs always with thymine and cytosine always pairs with __________, following the rules of base pairing. The addition of nucleotides occurs in ________ directions of the DNA molecules simultaneously. 5. Two new complementary strands are produced. Each molecule contains one original strand and one new strand. This is why DNA Replication is called _________-conservative Practice: Original Strand: ATCGGCTAA Complementary Strand: _________________ 4