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Katelyn Tignor 11.14.11 Lesson Plan Template Katelyn Tignor Topic: Genetic Mutations Date: 11/2/11 NSES: TEACHING STANDARD B & D; ASSESSMENT STANDARD B; CONTENT STANDARD C SOL: BIO.6e The student will investigate and understand common mechanisms of inheritance and protein synthesis. Key concepts include genetic variation (mutation, recombination, deletions, additions to DNA). Grade level: 10th grade Biology Subject: General Biology Daily Question: What is the difference between base substitution mutations and frame-shift substitutions, and why might they create nonfunctional proteins? Procedures for Learning Experience Guiding Questions Materials Needed Evaluation (Assessment) Approximate Time Needed Engagement: Present the students with a picture of different superheroes that underwent gene mutations to gain their superpowers. Get the students to DISCUSS the similarities between the X-men, Teenage Mutant Ninja Turtles, and Spiderman. I will record the discussion points with Inspiration. What do all of these superheroes have in common? How did they acquire their superpowers? Where can mutations occur? How many different mutations do you think you can create? How do these mutations affect the rest of the DNA strands? PowerPoint presentation, Inspiration, mini Gene Mutation Templates, Informal evaluation of student involvement and engagement 15 minutes What are the different kinds of base substitution mutations and what do they affect genes? What is the difference between substitution mutations and frame-shift Gene Mutations worksheet, paper/pencil Informal evaluation of student participation and formal evaluation of completion of worksheet, correct manipulation of DNA 20 minutes Provide students with mini Gene Mutation Templates. Have them create mutations and show how the DNA strand is affected. Plan B: write similarities on dry erase/chalk board and show no picture Exploration: Pass out WORKSHEETS and have the students follow along as the teacher reads the introduction aloud. Students will complete a Gene Mutations worksheet with a partner to develop their own understanding of the topic. Katelyn Tignor 11.14.11 Explanation: PRESENT a PowerPoint presentation on Genetic Mutations. During the presentation, I will demonstrate mutations by altering a DNA model (gene mutation template). Plan B: If PowerPoint fails, I will have to give the lesson orally and use the DNA model as a visual. Extension: Students will form groups of four based on seating arrangement to RESEARCH different diseases caused by genetic mutations. Diseases include: Phenylketonuria (PKU), Sickle Cell Disease, Cystic Fibrosis, Severe Combined Immunodeficiency Syndrome (SCID), Duchenne Muscular Dystrophy (DMD), Parkinson’s Disease, and Skin Cancer. Students will then quickly present their findings to the class. While presenting, students will fill out our premade note-taking forms on the various diseases. Plan B: students will use poster board and markers if they cannot access glogster. Before students leave class, I will play the gene mutation song that Robin Shaulis composed and recorded. mutations? Why do you think that mutated proteins might not be functional? What is a gene mutation? What are the different kinds of gene mutations? How do gene mutations affect protein function? Are there good mutations? sequences, and thoughtful answers to discussion questions PowerPoint, Computer, Projector, Gene Mutation Template Informal evaluation of student engagement and student response to discussion questions. 20 minutes Laptops, internet access, What genetic mutation caused Note-taking this disease? forms, glogster What are some symptoms and treatment options? Formal evaluation of poster with all questions answered. 10 minutes for research What is this disease? Formal evaluation of oral presentation quality. Informal evaluation of group member participation. 10 minutes for poster creation 10 minutes for oral presentations Notes: Have poster materials set out on counter so students can retrieve materials quickly (will reduce confusion and transition time) Allow students to answer questions during the lesson without raising their hands to speed up lecture, remind them that they must be respectful and not talk over others though (if does not work, resort back to hand raising) Have laptops set out on desks, but students are only allowed to open after finish worksheet and during disease research Students can visit three pre-approved websites if finish the genetic worksheet early Katelyn Tignor 11.14.11 Use the Genetic Mutation Template (home-made) to demonstrate different gene mutations The worksheet, note-taking form, PowerPoint presentation, and a sample Glogster creation are below. Here is a list & description of the approved websites that students can explore after completing the worksheet •http://nature.ca/genome/04/0413_e.cfm#010 (Turn your name into a DNA sequence & test out different mutations on it) •http://www.dnai.org/lesson/go/1738/1419 (Interactive video tutorial with 3D animation & narration) •http://molo.concord.org/database/activities/102.html (Interactive mutation simulation--requires Java) Katelyn Tignor 11.14.11 Gene Mutations There are two types of mutations, small-scale gene mutations and large-scale chromosomal mutations. You will work with gene mutations in this handout. The two types of gene mutations are base substitution mutations and frame-shift mutations. BASE SUBSTITUTION MUTATIONS Base substitution is the simplest type of mutation where a nucleotide pair is replaced with a different nucleotide pair. There are four types of base substitution. One type is called transversion mutation. This happens when one purine (A,G) is swapped with a pyrimidine (C,T). The second type, transition mutations, occurs when one purine is swapped with the other purine or when a pyrimidine is swapped with the other pyrimidine. The third is a silent mutation. Silent mutations occur when one base in a codon is changed, but codes for the same amino acid. Nonsense mutation is the fourth kind of base substitution. A nonsense mutation creates a new stop codon in place of an amino acid. Base Substitution: Transversion Mutation: Transition Mutation: Silent Mutation: Nonsense Mutation: GAC → GGC GAC → TAC GAC → GAG GAC → AAC GAC → GAT TGT → TGA Thr → Thr ATG → ATT Tyr → STOP (purine to pyrimidine) (pyrimidine to purine) (purine to purine) (pyrimidine to pyrimidine) DNA Amino Acid DNA Amino Acid For questions 1-2, change ONE of the DNA nucleotides in the bolded codon. Write your altered codons on the Mutated DNA lines (only the one you mutated should be different). Then convert your new DNA sequence to mRNA. Lastly, write each of the new corresponding amino acids on the mutated amino acid line, and circle the mutated amino acid. Use the codon table on the last page to find the corresponding amino acids. 1) Use the DNA code below to demonstrate a purine → pyrimidine transversion mutation. Original DNA: TAC CAT GCA GAT CTG GCC CAG TTC ATC Katelyn Tignor 11.14.11 Mutated DNA: ____ ____ ____ ____ ____ ____ ____ ____ ____ Mutated mRNA: ____ ____ ____ ____ ____ ____ ____ ____ ____ Mutated Amino Acid: ____ ____ ____ ____ ____ ____ ____ ____ ____ Original Amino Acid: Met Arg Leu Asp Arg Val Lys STOP Val Is this a nonsense, missense, or silent mutation? ______________________________ 2) Use the DNA code below to demonstrate a purine → purine transition mutation. Original DNA: TAC GTC GCT CAA CGG GAC CTG ACC ACT Mutated DNA: ____ ____ ____ ____ ____ ____ ____ ____ ____ Mutated mRNA: ____ ____ ____ ____ ____ ____ ____ ____ ____ Mutated Amino Acid: ____ ____ ____ ____ ____ ____ ____ ____ ____ Original Amino Acid: Met Arg Val Ala Leu Asp Trp STOP Gln Is this a nonsense, missense, or silent mutation? ______________________________ FRAME-SHIFT MUTATION Frame-shift mutations are caused by inserting or deleting a nucleotide on the DNA strand. Since mRNA is read in threes (codons), the insertion or deletion of a base changes the reading frame of the rest of the sequence. The insertion shifts the reading frame to the right, and the deletion shifts the reading frame to the left. DNA Sentence: THE Insertion: THE DNA DNA SAI DTH SAQ IDT ↑ Insert a base ESE HES GEN EGE ESM NES Delete a base AKE MEL MAK EME OOK LOO FAT KFA Katelyn Tignor 11.14.11 DNA Sentence: THE Deletion: THE DNA DNA SAI SAI DTH DTH ESE ESE ↓ GEN GEE ESM SMA AKE KEM MEL ELO OOK OKF FAT AT 3) Insert a nucleotide anywhere in the DNA strand. Circle the mutated DNA base where the mutation took place. Original DNA: TAC GGA CGA TCT CAG GAG CCT ATA ATC Mutated DNA: ____ ____ ____ ____ ____ ____ ____ ____ ____ Mutated mRNA: ____ ____ ____ ____ ____ ____ ____ ____ ____ Mutated Amino Acid: ____ ____ ____ ____ ____ ____ ____ ____ ____ Original Amino Acid: Met Ala Arg Val Leu Gly Tyr STOP Pro 4) Delete a nucleotide anywhere in the DNA strand. Original DNA: TAC GGA CGA TCT CAG GAG CCT ATA ATC Mutated DNA: ____ ____ ____ ____ ____ ____ ____ ____ ____ Mutated mRNA: ____ ____ ____ ____ ____ ____ ____ ____ ____ Mutated Amino Acid: ____ ____ ____ ____ ____ ____ ____ ____ ____ Original Amino Acid: Met Ala Arg Val Leu Gly Tyr STOP Pro 5) Usually, a frame-shift mutation results in the synthesis of a nonfunctional protein. Why do you think that mutated proteins might not be functional? Katelyn Tignor 11.14.11 6) Based on your work, please explain the difference between a frame-shift mutation and a base substitution mutation. Note-Taking Form: Diseases Caused by Gene Mutations 1) Disease: Gene Mutation: Two symptoms: Treatment: 2) Disease: Gene Mutation: Two symptoms: Treatment: Katelyn Tignor 11.14.11 3) Disease: Gene Mutation: Two symptoms: Treatment: 4) Disease: Gene Mutation: Two symptoms: Treatment: 5) Disease: Gene Mutation: Two symptoms: Treatment: 6) Disease: Gene Mutation: Two symptoms: Treatment: 7) Disease: Gene Mutation: Two symptoms: Treatment: Katelyn Tignor 11.14.11 Katelyn Tignor 11.14.11 Katelyn Tignor 11.14.11 Katelyn Tignor 11.14.11 Lesson Plan Reflection During this lesson, my use of technology allowed me to take an abstract concept and make it concrete, engaging, and understandable to all students. The technologies and pedagogical approaches that I use correspond to the recognition, strategic, and affective networks of my students. My PowerPoint presentation meets the multimedia, spatial contiguity, temporal contiguity, and coherence principles. By using a PowerPoint presentation to introduce this topic, I am able to provide visuals along with the words. I ensured that the words and the corresponding pictures were on the same slide, so that they are presented simultaneously. I also excluded material that was not critical for the students to learn. The modality and direct manipulation principles are met with my mini-gene mutation and large gene mutation templates. I use the modality principle when I manipulate the large gene mutation template to demonstrate how mutations occur. Students are also able to manipulate the mini-gene mutation templates, which applies to the direct manipulation principle. Following all of the Universal Design for Learning (UDL) principles will greatly increase student understanding. During this lesson, PowerPoint, Inspiration software, glogster, and the internet were used. By using these technologies, students will gain a much deeper understanding of the material than they would with a lecture and their textbook. These technologies bring the material to life. Students are able to research information that interests them, visualize the concepts, and organize and present their thoughts. The gene mutation song that Robin Shaulis recorded will also be very helpful for learning the topic. Songs are much easier to memorize than a string of facts and makes learning much more fun for the students. These materials also ensure that class time is used efficiently. The PowerPoint presentation is much more exciting and interesting than the textbook and a lecture and it contains all of the information in one place. We do not have to flip through the textbooks or have to write the notes out on transparencies, both of which waste valuable class time. It is also much easier and faster for students to research a topic online than to go to the library and find the proper resources. Glogster is also extremely helpful for this lesson. Not only does it encourage students to organize their thoughts and focus on the most important details, but it also promotes creativity. It allows the students to design their presentation in creative and eye-catching ways. Students will be much more prone to pay attention to a lesson if their peers present it and if the material is relevant to their lives. Glogster also allows the students to include images of the genetic disease they are learning about. When test time comes around, that image may be the reason why they remember details about the disease. The technology used in this lesson allows me to present abstract material in a very clear and engaging way. The manipulations, visuals, and connections to “real” life all make the topic more interesting and understandable.