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DNA and RNA Chapter 12 DNA History Griffith and Transformation: Studied pneumonia bacteria Isolated strains of bacteria from mice Disease causing: smooth colonies Harmless strand: rough edge colonies Griffith’s Experiments Mice injected with the disease-causing bacteria = the pneumonia, death Mice injected with the harmless bacteria = live Heat killed disease-causing bacteria = Mice survived Mix heat killed disease-causing bacteria and harmless live bacteria = pneumonia, death Transformation What happened???? Transformation: one strain of bacteria changes permanently into another The harmless bacteria took in material from the dead disease-causing bacteria and it became a part of it. DNA and Chromosomes Prokaryotic cells lack organelles DNA is located in the cytoplasm Eukaryotic cells contain organelles Located in the nucleus DNA - The Double Helix Watson and Crick 1953 - Built a 3-D model DNA composition - 2 long chains of nucleotides held by hydrogen bonds Looks like a twisted ladder or spiral staircase. Nucleotide: made up of a 5-carbon sugar, a phosphate group, and a nitrogenous base DNA Bases A=T and C =G (Base Pairing) Sugar in DNA = Deoxyribose DNA Replication makes more DNA for new cells Replication occurs before cell division in Interphase (in “S”) Each strand of DNA has information needed to make the other “complementary” First – An enzyme called Helicase separates the double helix Replication forks: sites where separation and replication occur DNA polymerase Next we assemble complementary strands DNA polymerase: is the enzyme involved in assembling nucleotides to produce a new DNA strand It also proof reads each new DNA strand Differences in DNA and RNA DNA: Sugar: Deoxyribose Double stranded Contains Thymine Used to make more DNA and to make RNA RNA: Sugar: Ribose Single stranded Contains Uracil Used to make Proteins Structure of RNA Consists of a single strand of nucleotides Sugar is Ribose Nitrogen bases A = U and C = G Involved in making proteins Types of RNA Three types: Messenger RNA (mRNA): carries copies of DNA instructions to make proteins Ribosomal RNA (rRNA): “meeting place” where proteins are made Transfer RNA (tRNA): transfers amino acids according to coded messages on mRNA Protein Synthesis (Making Protein) Part 1: Transcription Takes place in the nucleus DNA is broken apart by the enzyme Helicase mRNA is produced by copying one side of the DNA RNA polymerase assembles “complementary” nitrogen bases (A = U and C = G) mRNA leaves the nucleus Protein Synthesis Part 2: Translation Takes place on the ribosome (site of protein synthesis) mRNA goes to the “meeting place” or ribosome The mRNA message is decoded if the code matches tRNA If the codes match tRNA drops off an amino acid which link to form a Polypeptide chain (or a protein) Protein Synthesis Summary Terms to Know Codon: three bases on mRNA that code for a single amino acid EX: UACGAGACA Read as: UAC GAG ACA Anti-codon - three bases on tRNA that must match the codon to join amino acids There are 64 possible three-base codons Start codon: begins the process of translation Stop codon: stops the process of translation mRNA CodonChart (to code for amino acids) When Copying Goes Wrong Mutations Gene mutations: mutations that produce changes in a single gene Point mutations: gene mutations involving changes in one or a few nucleotides Include: Substitution: one base is changed to another Insertions: an extra base pair is inserted Deletion: a base pair is deleted Frameshift Mutations: gene mutations that shift the reading frame of the genetic message. Chromosomal Mutations Changes in the number or structure of chromosomes Four Types: Deletions: loss of all or part of a chromosome Duplication: extra copy of parts of a chromosome Inversion: reverse the direction of parts of chromosomes Translocation: part of the chromosome breaks off and attaches to another CHAPTER 13 NOTES Selective breeding - allowing only those animals with desired characteristics to produce the next generation. Humans use selective breeding, to take advantage of naturally occurring genetic variation in plants, animals, etc.. Inbreeding is the continued breeding of individuals with similar characteristics. Inbreeding can lead to problems. Members of a breed are genetically similar - there is always a chance that a cross between two individuals will bring together two recessive alleles…for example joint deformities, etc. Breeders can increase the genetic variation (differences) in a population by inducing (causing) mutations, which are a source of genetic variability (differences). Changing the DNA Code Genetic engineering making changes in the DNA code of a living organism. Cutting Up DNA restriction enzymes cuts DNA at a specific sequence of nucleotides. Restriction enzymes are used to edit DNA. The enzyme cuts the molecule at specific sequences. The cut ends are called sticky ends which create complementary base sequences. Analyzing DNA Gel (or DNA) electrophoresis DNA fragments are placed at one end of a porous gel, and an electric voltage is applied, the DNA molecules move to the end of the gel creating bands used to compare the genes for relatedness. DNA Fingerprinting Genetic Engineering Terms to Know recombinant DNA - taking a gene from one organism and attach it to the DNA of another . Transgenic – describes an organism that contains genes from other species. Hybridization - mating dissimilar individuals to bring together the best of both organisms. The organisms produced are called Hybrids. A clone is a genetically identical cell produced from a single cell. Making More DNA For Analysis polymerase chain reaction (PCR) making many copies of a particular gene for analysis. Polymerase chain reaction (PCR) is used to make multiple copies of genes. Just a few cycles produces millions of copies. PCR Virtual Lab http://learn.genetics.utah.edu/content/labs/pcr/ Using Genetic Engineering To Benefit Mankind… Transformation - a cell takes in DNA from outside the cell. And incorporates it into it’s DNA. plasmid - A circular piece of DNA in bacteria. Used in transformation to create things like human insulin and growth hormone. Bacterial Transformation Used in Making Human Insulin and Growth Hormone Genetic marker—gene that distinguishes bacteria that carry foreign DNA from those that don't.