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Macromolecules 1 Organic Compounds • Compounds that contain CARBON are called organic. • Macromolecules are large organic molecules. 2 Carbon (C) • Carbon has 4 electrons in outer shell. • Carbon can form covalent bonds with as many as 4 other atoms (elements). • Usually with C, H, O or N. • Example: CH4(methane) 3 Macromolecules • Large organic molecules. • Also called POLYMERS. • Made up of smaller “building blocks” called MONOMERS. • Examples: 1. Carbohydrates 2. Lipids 3. Proteins 4. Nucleic acids (DNA and RNA) 4 Question: How Are Macromolecules Formed? 5 Answer: Dehydration Synthesis • Also called “condensation reaction” • Forms polymers by combining monomers by “removing water”. HO H HO H H2O HO H 6 Dehydration Synthesis • Combining simple molecules to form a more complex one with the removal of water – ex. monosaccharide + monosaccharide ----> disaccharide + water – (C6H12O6 + C6H12O6 ----> C12H22O11 + H2O • Polysaccharides are formed from repeated dehydration syntheses of water – They are the stored extra sugars known as starch 7 Question: How are Macromolecules separated or digested? 8 Answer: Hydrolysis • Separates monomers by “adding water” HO H H2O HO H HO H 9 Carbohydrates used as a source of energy; short term and long term energy also some animals and organisms use carbs for structural purposes. 10 Carbohydrates • Small sugar molecules to large sugar molecules. • Examples: A. monosaccharide B. disaccharide C. polysaccharide 11 Carbohydrates Monosaccharide: one sugar unit Examples: glucose glucose (C6H12O6) deoxyribose ribose Fructose Galactose 12 Carbohydrates Disaccharide: two sugar unit Examples: (C12H22O11) – Sucrose (glucose+fructose) – Lactose (glucose+galactose) – Maltose (glucose+glucose) glucose glucose 13 Carbohydrates Polysaccharide: many sugar units Examples: starch (bread, potatoes) glycogen (beef muscle) cellulose (lettuce, corn) glucose glucose glucose glucose cellulose glucose glucose glucose glucose 14 Lipids some store energy, some lipids form important parts of biological membranes & waterproof coverings. 15 Lipids • General term for compounds which are not soluble in water. • Lipids are soluble in hydrophobic solvents. • Remember: “stores the most energy” • Examples: 1. Fats 2. Phospholipids 3. Oils 4. Waxes 5. Steroid hormones 6. Triglycerides 16 Lipids Six functions of lipids: 1. Long term energy storage 2. Protection against heat loss (insulation) 3. Protection against physical shock 4. Protection against water loss 5. Chemical messengers (hormones) 6. Major component of membranes (phospholipids) 17 Lipids Triglycerides: composed of 1 glycerol and 3 fatty acids. H O H-C----O C-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH3 O H-C----O C-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH3 O fatty acids H-C----O C-CH -CH -CH -CH 2 2 2 H glycerol 18 Fatty Acids There are two kinds of fatty acids you may see these on food labels: 1. Saturated fatty acids: no double bonds (bad) O saturated C-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH2-CH3 2. Unsaturated fatty acids: double bonds (good) O unsaturated C-CH2-CH2-CH2-CH 19 Proteins 20 Proteins (Polypeptides) • Amino acids (20 different kinds of aa) bonded together by peptide bonds (polypeptides). • Six functions of proteins: 1. Storage: albumin (egg white) 2. Transport: hemoglobin 3. Regulatory: hormones 4. Movement: muscles 5. Structural: membranes, hair, nails 6. Enzymes: cellular reactions 21 Major Protein Functions • • • Growth and repair Energy Buffer -- helps keep body pH constant referred to as maintaining homeostasis 22 Proteins (Polypeptides) Four levels of protein structure: A.Primary Structure B. Secondary Structure C. Tertiary Structure D.Quaternary Structure 23 Primary Structure Amino acids bonded together by peptide bonds (straight chains) Amino Acids (aa) aa1 aa2 aa3 aa4 aa5 aa6 Peptide Bonds 24 Secondary Structure • 3-dimensional folding arrangement of a primary structure into coils and pleats held together by hydrogen bonds. • Two examples: Alpha Helix Beta Pleated Sheet Hydrogen Bonds 25 Tertiary Structure • Secondary structures bent and folded into a more complex 3-D arrangement of linked polypeptides • Bonds: H-bonds, ionic, disulfide bridges (S-S) • Call a “subunit”. Alpha Helix Beta Pleated Sheet 26 Quaternary Structure • Composed of 2 or more “subunits” • Globular in shape • Form in Aqueous environments • Example: enzymes (hemoglobin) subunits 27 Nucleic Acids 28 Nucleic acids • Two types: a. Deoxyribonucleic acid (DNAdouble helix) b. Ribonucleic acid (RNA-single strand) • Nucleic acids are composed of long chains of nucleotides linked by dehydration synthesis. 29 Nucleic acids • Nucleotides include: phosphate group pentose sugar (5-carbon) nitrogenous bases: adenine (A) thymine (T) DNA only uracil (U) RNA only cytosine (C) guanine (G) 30 DNA Nitrogenous bases 31 DNA Nucleotide Phosphate Group O O=P-O O 5 CH2 O N C1 C4 Nitrogenous base (A, G, C, or T) Sugar (deoxyribose) C3 C2 32 RNA Nucleotide • directs cellular protein synthesis • found in ribosomes & nucleoli 33 5 DNA double helix O 3 3 O P 5 O C G 1 P 5 3 2 4 4 2 3 1 P T 5 A P 3 O O P 5 O 3 5 P 34 Enzymes and Enzyme Action • Catalyst : inorganic or organic substance which speeds up the rate of a chemical reaction without entering the reaction itself • enzymes: organic catalysts made of protein • most enzyme names end in -ase • enzymes lower the energy needed to start a chemical reaction. (activation energy) • begin to be destroyed above 45øC. (above this temperature all proteins begin to be destroyed) 35 It is thought that, in order for an enzyme to affect the rate of a reaction, the following events must take place. 1. The enzyme must form a temporary association with the substance or substances whose reaction rate it affects. These substances are known as substrates. 2. The association between enzyme and substrate is thought to form a close physical association between the molecules and is called the enzyme-substrate complex. 3. While the enzyme-substrate complex is formed, enzyme action takes place. 4. Upon completion of the reaction, the enzyme and product(s) separate. The enzyme molecule is now available to form additional complexes. 36 How do enzymes work? • substrate: molecules upon which an enzyme acts • the enzyme is shaped so that it can only lock up with a specific substrate molecule enzyme substrate -------------> product 37 Factors Influencing Rate of Enzyme Action 1. pH - the optimum (best) in most living things is close to 7 (neutral) • high or low pH levels usually slow enzyme activity • A few enzymes (such as gastric protease) work best at a pH of about 2.0 38 39 . 2-Temperature - strongly influences enzyme activity optimum temperature for maximum enzyme function is usually about 35-40 C. reactions proceed slowly below optimal temperatures above 45 C most enzymes are denatured (change in their shape so the enzyme active site no longer fits with the substrate and the enzyme can't function) 40 41 3-Concentration Concentrations of Enzyme and Substrate • ** When there is a fixed amount of enzyme and an excess of substrate molecules -- the rate of reaction will increase to a point and then level off. 42