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Orflo Application Protocol 12/2016 PropidiumIodide(PI)-CellCycleStainingProtocol Reagents: • PropidiumIodidesolution(1mg/ml,e.g.LifeTech.P3566) • 70%Ethanol(e.g.SigmaE7023,inPBSordistilledwater)-Storeat-20°C • IcecoldCa2+-freeandMg2+-freePBSwithMoxiFlowReagent o PhosphateBufferedSaline(PBS,e.g.LifeTech#10010-23) o 20µl/mLMoxiCyteFlowReagent(OrfloTechnologies,MXA080) • DNAse-freeRNAseA(e.g.,SigmaR6513)dissolvedto1mg/ml CellCycleSynchronization(SerumStarvation): 1. Removeoldmediaandreplacewithserumfreemedia(NOTE:Somecell linesrespondpoorlytoserum-freemedia.Theselinesmightrequirea gradualintroductiontoserum-free(24hrsin1%FBS,24hrsin0FBS) 2. Toreleasecells,passageasappropriateandadd10%FBS.Forcellcycle arrestdrugaddition,adddrugtomediaPRIORtoaddingcellstoensure propermixing/dilution EthanolFixationProtocol 1. Pelletcells(300xg,5min)andremovesupernatant.Atthisstageitiscritical toachieveasingle-cellsuspension.Notes: i. Ifyouaredetachingadherentcells: 1. Leavethecellsinthedetachmentmedia(e.g.Accutase)for 15+minutes. 2. Attheendoftheincubationperiod.Pipettetrituratethecells inthatdetachmentmediatobreakupclusters. 3. Vortexthedetachmentmedia/cellsuspensiongently(e.g.3 setting)for~30secondstofurtherbreakapartthecluster ii. Forsuspensioncells: 1. Resuspendthecellsinadetachmentmedia(e.g.Accutase) pipettingtodispersethecells 2. Leavethecellsinthedetachmentmedia(e.g.Accutase)for 15+minutes. 3. Attheendoftheincubationperiod.Pipettetrituratethecells inthatdetachmentmediatobreakupclusters. 4. Vortexthedetachmentmedia/cellsuspensiongently(e.g.3 setting)for~30secondstofurtherbreakaparttheclusters. 2. WashthecellstwiceinPBS(300xg,5min,4°C).Countthecellswhen finished. a. Note1:Recommendatotalof5e5cellssothatthere-suspensionis 1e6/ml(whenadding0.5mlfinalre-suspensionlater). b. Note2:PutPBSoniceduringcentrifugationstokeepcold. c. Note3:Pipettetriturate10-20xwhenre-suspendingpellettoensure singlecellsuspension.Preferredapproachisadd~1mLPBStopellet ORFLO Technologies Ketchum, ID [email protected] Page1 855-TRY-MOXI www.orflo.com Orflo Application Protocol 12/2016 PropidiumIodide(PI)-CellCycleStainingProtocol 3. 4. 5. 6. 7. andusea 1mLpipettetotriturate.Thenaddremaining4mlPBSforwash. Invert3x. Re-suspendthepelletinapproximately500ulofice-coldPBS.Pipetwith 1000µLpipette,upanddown,20times.Itisimportantthatthisbeagood single-cellsuspensionatthispoint,orthecellswillbefixedasclumps. Aliquot4.5mLoficecold70%ethanoltoa15mLcentrifugetube. Holdethanoltubeandcelltubeinacoldpackandvortexgently. Add.5mlcellsdrop-wisetothe70%ethanoltube(whilevortexing)usinga 100uLpipette(maxsizetoensuredropvolumeissmall). PlaceinFreezerfor2hrto4days PropidiumIodideStainingProtocol 1. Centrifugeat800xg,10°C,5minwithBRAKEOFF.Removetheethanol. 2. Re-suspendin1mlice-coldPBSwith20xpipettetrituration(1000uLpipette) 3. Add4mLice-coldPBSandinvert3x. 4. Centrifugeat700xg,10°C,5minwithBRAKEOFF.Removethesupernatant. 5. Re-suspendin1mlice-coldPBSwith20xpipettetrituration(1000uLpipette) 6. Add4mLice-coldPBSandinvert3x 7. Centrifugeat600xg,10°C,5minwithBRAKEOFF.Removethesupernatant. 8. Re-suspendthepelletedcellsin1mlofPBS.UseMoxiGOtodetermineacell concentrationandadjustthecellconcentrationto2e5cells/ml. 9. Add20ul/mlPropidiumIodide(1mg/ml)to1mlofthe2e5/mlcell suspension(finalPIconcentrationof20µg/ml). 10. Add20uLof10mg/mlRNAseandincubateat37°Cfor30minutes. 11. AnalyzeonMoxiGOusingtheCellCycleAssay. ORFLO Technologies Ketchum, ID [email protected] Page2 855-TRY-MOXI www.orflo.com