Download CETT CDG handout for clinicians AKT 4-30-10 17-39-08

Survey
yes no Was this document useful for you?
   Thank you for your participation!

* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project

Document related concepts

Cell-free fetal DNA wikipedia , lookup

Genetic engineering wikipedia , lookup

Population genetics wikipedia , lookup

RNA-Seq wikipedia , lookup

Protein moonlighting wikipedia , lookup

Point mutation wikipedia , lookup

Gene expression profiling wikipedia , lookup

Saethre–Chotzen syndrome wikipedia , lookup

Pharmacogenomics wikipedia , lookup

Site-specific recombinase technology wikipedia , lookup

Gene therapy wikipedia , lookup

Genome (book) wikipedia , lookup

History of genetic engineering wikipedia , lookup

Vectors in gene therapy wikipedia , lookup

Therapeutic gene modulation wikipedia , lookup

Neuronal ceroid lipofuscinosis wikipedia , lookup

Epigenetics of neurodegenerative diseases wikipedia , lookup

Public health genomics wikipedia , lookup

Artificial gene synthesis wikipedia , lookup

DNA paternity testing wikipedia , lookup

Genetic testing wikipedia , lookup

Microevolution wikipedia , lookup

Designer baby wikipedia , lookup

Medical genetics wikipedia , lookup

Transcript
Predicting prognosis
Assisting researchers in
understanding the molecular basis of
disease in the pursuit for improved
treatments and cures
Assessing the possibility of therapy
for some forms of CDG
Providing the opportunity for carrier
testing in at-risk family members of
those with a known mutation
Interpreting Test Results
•
Positive result: A biochemical
finding and mutations have been
identified that are of particular
diagnostic and clinical significance
Negative result: No abnormal
biochemical pattern or mutation has
been identified. A negative result
does not exclude the presence of a
glycosylation defect or a mutation
that cannot be identified by the
current panel and technology.
If variants of unknown
significance with or without
abnormal biochemical findings are
detected, follow-up testing of parents
and other available family members is
generally recommended to aid in
determining the segregation pattern
of the identified variant(s).
Sample requirements
Ship overnight to:
Emory Genetics Laboratory
2165 North Decatur Road
Decatur, GA 30033
404-778-8500
Please contact the lab for current pricing
and CPT information.
Resources/References
•
•
•
•
GeneReviews:
http://www.ncbi.nlm.nih.gov/bookshe
lf/br.fcgi?book=gene&part=cdg
National Organization for Rare
Diseases (NORD):
www.rarediseases.org
Euroglycanet:
www.euroglycanet.org/uz/CDG
The CDG Family Network:
www.cdgs.com
Biochemical and Molecular
Testing For
Congenital Disorders of
Glycosylation (CDG)
Contact Information
Emory Genetic Lab Customer Service
1-800-366-1502 (toll free)
or 404-778-8499
Ijmkje Cuperus, MS, Genetic Counselor
1-800-366-1502 (toll free)
or 404-778-8550
J. Daniel Sharer, PhD, FACMG, Emory Genetics
Biochemical Laboratory
1-800-366-1502 (toll free)
or 404-778-8500
Transferrin Analysis:
3-5 ml blood in a red top (serum) or
green top (plasma) tube. Centrifuge to
separate serum or plasma. Ship frozen.
Michael J. Gambello, MD, PhD
Associate Professor of Human Genetics
and Pediatrics
1-800-366-1502 (toll free)
or 404-778-8500
DNA Analysis:
3-5 ml whole blood in a purple top
(EDTA) tube. Ship at room temperature
within 5 days of collection.
Emory Genetics Laboratory (EGL) is a
comprehensive clinical genetics testing
laboratory specializing in molecular
cytogenetics, rare disease testing, and
newborn screening confirmatory testing.
CDG
Ia
Ib
Ic
Id
Ie
If
Ig
Ih
Ii
Ij
Ik
IL
Im
In
Gene
PMM2
MPI
ALG6
ALG3
DPM1
MPDU1
ALG12
ALG8
ALG2
DPAGT1
ALG1
ALG9
DOLK
RFT1
CDG
Gene
IIa
MGAT2
IIb
GCS1
IIc
SLC35C1
IId
B4GALT1
IIe
COG7
IIf
SLC35A1
IIg
COG1
IIh
COG8
GNE-Related
TUSC3-Related
ATP6V0A2-Related
Congenital Disorders of Glycosylation
Congenital disorders of glycosylation
(CDGs), formerly called carbohydrate
deficient glycoprotein syndromes, are a
group of genetic disorders caused by
alterations
in
protein
and
lipid
glycosylation. Glycosylation is a process
whereby sugars (glycans) are linked
together in a specific pattern and are
attached to proteins and lipids. The sugar
complexes are used as signals for the
proper cellular localization of the proteins
and lipids. These sugar-protein and
sugar-lipid
complexes
are
called
glycoproteins and glycolipids, and they
are needed for normal function and
growth of all tissues and organs in the
human body.
abnormal sugar chain: disorders of Nglycosylation,
disorders
of
Oglycosylation,
multiple
glycosylation
disorders,
and
glycolipid
disorders.
Disorders of N-glycosylation are the most
common, and can be divided into type I
and type II (CDG I, CDG II) based on the
location in the glycosylation pathway in
which the defect occurs. Different
subtypes in each group are defined by the
specific gene involved and are designated
by a small letter code (Ia, Ib, Ic, etc.).
Type I CDGs are caused by defects in
genes coding for enzymes that create the
sugar chain precursors or that attach
them to proteins and lipids. Type II CDGs
are caused by defects in genes coding for
enzymes that modify the sugar chains
after they are added to the protein or
lipid. Currently, more than 30 variants of
CDG have been described. CDG type Ia is
the most common form of CDG, having
been reported in more than 700
individuals.
Symptoms
The process of glycosylation is very
complex, involving at least 100 separate
enzymes used to create and modify the
sugar chains and add them to thousands
of different proteins and lipids. Incorrect
glycosylation,
and
therefore
mislocalization of proteins and lipids, is the
underlying basis of the different clinical
features seen in individuals with CDG.
Classification
CDGs can be classified into four major
groups depending on the nature of the
The symptoms and severity of CDGs vary
significantly between people. Clinical
manifestations can range from severe
developmental delay, failure to thrive,
seizures, and hypotonia with multiple
organ
system
involvement,
to
hypoglycemia
and
protein-losing
enteropathy with normal development.
The specific symptoms a person displays
will depend upon the tissues affected by
the mislocalization of glycoproteins and
glycolipids.
Most commonly, CDG disorders begin in
infancy and are associated with minor
dysmorphic
features
(e.g.,
inverted
nipples,
sub-cutaneous
fat
pads,
strabismus,
cerebellar
atrophy
and
hypoplasia). Some of the symptoms may
become more or less prominent at later
ages. Failure to thrive is often a good
indicator for a CDG diagnosis.
Treatment
Current treatment for CDG patients is
supportive therapy and treatment of
symptoms and sequelae. There is not a
specific medicine available to treat CDG,
except for patients with CDG-Ib (who can
take mannose) and some patients with
CDG-IIc (who can take fucose).
Testing for CDG
Most CDG patients can be diagnosed by
biochemical
analysis
of
transferrin
isoforms and glycan structural analysis to
determine the glycosylation status of
proteins in serum. Once CDG is diagnosed
biochemically, genetic testing is required
to determine the type and subtype of
CDG.
Because of the wide variety and overlap
of symptoms seen in affected individuals,
it is very difficult to identify which CDG
gene may be responsible for the
symptoms in any given patient. While
single gene testing is available, our panel
allows for simultaneous testing of
multiple CDG genes which provides a
significant diagnostic advantage over
single gene sequencing. Because DNA
analysis is available for some but not all
forms of CDG, biochemical analysis is an
integral component of CDG testing. If
you have questions about what testing
would be best for your patient, please
contact the lab.
Additional benefits of testing include:


Providing information for recurrence
risk, prenatal diagnosis, and family
planning
Helping physicians to determine
appropriate follow-up testing and
develop a health maintenance plan