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Fungi represent a group of heterotrophic living organisms which are distinct from all others, and have been assigned to their own kingdom, Fungi. At present, about 100,000 species of fungi are scientifically known, and around 200,000 more species are estimated to still undiscovered. Fungi are causative agents for many plant diseases. The plant pathogen that caused Irish Famine (1845-47) was the fungus Phytophthora infestans. In humans, fungi are responsible for the ringworm of the body and athlete’s foot diseases. However, all fungi are not detrimental. The yeasts are of commercial importance in the production of bread, beer and wine. Other fungi are used by pharmaceutical companies to produce drugs and antibiotics such as penicillin. Together with heterotrophic bacteria, fungi are the principal decomposers of the biosphere. Decomposers are as essential to the existence of life on earth as the producers. Many fungi form important symbiotic relationships, such as mycorrhizae and lichens. General characters Cellular organisation of Fungi All fungi are filamentous, except the unicellular ones. The individual thread-like filaments are called as hyphae (singular: hypha). A profuse branching network of hyphae is known as a mycelium (plural: mycelia) (Fig. 1.). The word ‘mycelium’ is derived from Greek word mykes, meaning ‘fungus. It is because of this reason, the discipline that deals with the scientific study of fungi is known as mycology. The hyphae can be long and multinucleate cells known as coenocytes (e.g., Water molds), or can be septate and cellular (e.g., Sac fungi). A typical fungal cell is eukaryotic in character, i.e., it has a membrane bound nucleus, a nucleolus, and membranous organelles in the cytoplasm. Mitochondria are generally abundant. The endoplasmic reticulum is sparse and of smooth type, i.e., without attached ribosomes. The ribosomes are of 80 S type. Small vacuoles are present, dictyosomes plastids are totally absent. are rare, while Like roots, the hyphae grow only at tips. The cell wall of all fungi, except Oomycota, particularly the innermost wall layer, is rich in chitin: a polymer of N- acetylglucosamine arranged in microfibrils similar to cellulose. The chitin layer is followed by a predominantly proteinaceous layer. External to this layer, and outermost to it, is a thick layer of polymerised sugars of complex structure. Septa Another striking feature of hyphae is the nature of the cross walls, called as septa (singular: septum). Lower fungi mostly lack the septa. For example, hyphae in Myxomycota are coenocytes with no septa; hyphae in Oomycota and Zygomycota are usually nonseptate, comprising of long, tubular cells with hundreds of nuclei. On the other hand, hyphae in Ascomycota and Basidiomycota are septate. In Ascomycota, the septum has a small and simple pore in its center that allows cellto-cell cytoplasmic connection (Fig. 2.a.). In Basidiomycota, the pore in the septum has a complex structure, with a collar or hemispherical cap on each side (Fig. 2.b.). Fruiting body In Ascomycota and Basiodiomycota, some part of mycelium forms a large, compact and highly organised structure called as a fruiting body, e.g. morel, mushroom, and puffball. The fruiting body is the chief means of spore production. Within large fruiting bodies of some fungi (e.g., bracket fungi), three types of hyphae occur: (i) Generative hyphae, which are thin-walled and produce spores. (ii) Skeletal hyphae, which are thick-walled and unbranched. (iii) Binding hyphae, which are thick-walled but show profuse branching. These adhere to the other types and bind them into a solid structure. Modes of nutrition Like animals, all fungi show heterotrophic mode of nutrition. However, unlike animals, fungi are unable to engulf food materials. Therefore, fungi derive nutrients from the environment, from living, dying or dead organisms. Based on this, fungi are divided into three categories: i) Biotrophs: These obtain nutrients from the living hosts, without killing them. Many biotrophs secrete chemicals that make the plasma membrane permeable to sugars. As they leak from the host cell, the fungus absorbs them. Whereas majority of biotrophic fungi remain confined to intercellular spaces, a few are able to pierce through the cell wall by creating a hole and inserting a portion of its filamentous cell, called as haustorium. The haustorium brings it close to the plasma membrane and makes it easier to absorb nutrients. ii) Necrotrophs: These first attack and kill the living hosts and then absorb the released nutrients. Many necrotrophs secrete toxins that kills host cell. Fungal toxins damage the plasma membrane due to loss of nutrient equilibrium that kills host cell. iii) Saprotrophs: Absorb nutrients from the dead organisms, after they have died of other causes. Saprotrophs extracellular predominantly digestion, depend whereby on the digestive enzymes are secreted to breakdown the host polymers. Modes of reproduction Spores The spore formation is a characteristic feature of fungi. The spores are resistant resting stages, which are the primary means of reproduction, dispersal and survival. These are produced either asexually or sexually. Asexual spores In the Mastigomycota and Zygomycota, asexual spores produced are called sporangiospores; the latter are produced inside the large swollen tip of a hypha. At the tip of hypha, cytoplasm and many nuclei accumulate. Then a septum seals the region off from the rest of the hypha and each nucleus organises the cytoplasm around it to form a spore. When the hyphal wall breaks down, the spores are released. When the sporangiospores germinate, they are non-motile except in Mastigomycota. In the Ascomycota, Basidiomycota and Deuteromycota, asexual spores are formed in conidia (singular: conidium). In other words, spores do not form inside a sporangium. The simplest case of conidia formation is where the tip of a hypha forms septa, cutting off several uninucleate cells, each forming an individual spore. In more complex forms, special flaskshaped cells push out a large bud of material, which forms a septum and becomes conidium. Subsequently, more and more material is budded off from the basal cell and a chain of conidia is produced – forming a long and upright conidiophore (Fig. 3). On germination, conidia are always non-motile and grow out as a hypha that develops a new mycelium. In fungi, the spores are small in size and light in weight, thus being able to get dispersed easily to great distances. Many fungi have long-lived spores that can withstand environmental fluctuations. The most common type of resistant spore is a chlamydospore, especially in soil fungi. Chlamydospores are formed, when a mass of protoplasm accumulates rich in within a reserves of short length oil of or glycogen hypha with thickened walls. As the conditions become unfavourable, the rest of the hypha dies. Only the chlamydospore survives, until the return of favourable conditions. Another type of resistant structures that develop generally in biotrophic fungi are called as sclerotia (singular: sclerotium). It develops from a portion of branching mycelium in which the hyphae form an aggregate structure. The outermost hyphae are swollen, globose and thick-walled. The inner mass of hyphae is thin-walled and filled with nutrients. The sclerotia germinate depending upon the conditions favourable to the host. Heterokaryosis Almost in majority of the fungi, sexual reproduction does not involve the production of distinct gametes. Instead, hyphae of one mycelium fuse with those of the other. These two mating hyphae are morphologically similar but physiologically different and are designated as plus (+) and minus (-). The fusion of two hyphae, called plasmogamy, is not immediately followed by the nuclear fusion, called karyogamy. The fused hypha that contains two types of nuclei (+ and -) forms a dikaryon. It grows for sometime, a condition called as heterokaryosis. The latter is similar to being diploid as the + nuclei may carry different alleles than – nuclei. Ultimately, the karyogamy occurs, wherein the two nuclei of compatible mating types fuse to form a diploid nucleus. This is followed immediately by meiosis, during which synapsis and crossing over takes place. As a result of this, + and – types of spores are produced that have recombination of alleles. The spores, numbering millions, blow away, and each germinates into a new + or – mycelium. Parasexuality In some fungi, the compatible nuclei fuse prematurely to form a diploid nucleus followed by meiosis, a process termed as parasexual cycle. Then the hypha returns to a heterokaryotic phase, but with haploid nuclei. When these nuclei participate in the formation of conidia or sporangiospores, the spores in that case have different genotype than the original parental nuclei. In the Deuteromycota, the parasexual cycle is the only means of genetic recombination. Classification of fungi In the two-kingdom classification, fungi along with bacteria were grouped under plants, because they produce spores and have cell walls. More recently, it has become now clear that the living organisms grouped together as fungi are obviously different from plants because: (i) They lack plastids. (ii) Their walls are generally devoid of cellulose. (iii) The main body is filamentous rather parenchymatous. (iv) They differ in many biochemical pathways. than Presently, the classification of fungi is in a state of flux. More recently, with molecular evidences available, the classification of fungi is witnessing a continuous splitting and regrouping of different divisions under the kingdom Fungi. The Slime molds and Water molds traditionally grouped together under fungi, are now excluded from the true fungi, and are included under the kingdom Protista. Still, for the purpose of simplicity, all the organisms that were previously known as fungi, including true fungi can are recognised under the following seven divisions (or phyla): Kingdom: Mycota (Fungi) Division-I – Myxomycota Division-II – Oomycota Division-III – Chytridomycota Division-IV – Zygomycota Division-V – Ascomycota Division-VI – Basidiomycota Division-VII – Deuteromycota Diagnostic characters of Divisions Myxomycota (Slime molds) Slime molds are quite distinct from the true fungi. These are heterotrophic and form spores, but lack cell walls and show a unique body organisation. The body is a large mass of protoplasm containing thousands or millions of nuclei, all in the same cytoplasm and covered by only a plasma membrane. This mass of protoplasm, called as a plasmodium, is capable of migrating over a substrate just like amoeba. Oomycota (Water molds) Members of this division are aquatic for part of their life cycle. They live in water, soil, and a few are parasitic on plants and animals. The great potato blight and famine in Ireland in 1846-47 was caused due to Phytophthora infestans, which belongs to this group. The members belonging to Oomycota range from unicellular to highly branched, coenocytic and filamentous forms. The latter somewhat resemble the hyphae that are characteristic of true fungi. For this reason, they were grouped under the fungi until recently. They reproduce both sexually and asexually. The asexual reproduction is by means of motile zoospores, with two flagella, one tinsel and another whiplash. Unlike true fungi, their cell wall is composed of cellulose, and not the chitin. The sexual reproduction is of oogamous type. Chytridomycota (Chytrids) Chytrids are predominantly aquatic fungi. They also occur in soils from ditches, ponds and streams. Several chytrids live as saprophytes on substrates, such as dead insects and a few are plant pathogens. Chytrids are either unicellular throughout their life cycle or form a small non-septate mycelium, and are thus coenocytic. Like other fungi, their cell wall contains chitin, and store glycogen. They are distinguished from other fungi primarily by their motile zoospores and gametes, most of which have a single, flagellum. Zygomycota (Conjugation fungi) posterior whiplash These fungi are mostly terrestrial. Most of these fungi live on decaying plant and animal matter in soil, occurring mostly as saprophytes. Some of these are parasitic on plants and animals; and a few form symbiotic association with plants (endomycorhizae). These fungi have simple mycelia consisting of branched and coenocytic hyphae. Unlike water molds, the asexual spores and gametes are non-motile. The phylum is named for its characteristic zygospores, a highly resistant diploid cell formed at the time of conjugation, when two gametangia unite, prior to fertilisation. The zygospores develop within thick-walled structures called zygosporangia, that remain dormant for longer periods. stolonifer) is The the black most Zygomycota. Ascomycota (Sac fungi) bread-mold familiar example (Rhizopus of the All the members of the phylum show filamentous growth forms, except the unicellular yeasts. The hyphae have perforated septa. The characteristic feature of this phylum is the ascus, a sac-like structure containing haploid sexual spores termed as ascospores. The ascus formation occurs within a dense compact mass of interwoven hyphae, forming a fruiting body, called ascocarp. Asexual reproduction usually occurs by the formation of multinucleate conidia, which are borne at the tips of modified hyphae called conidiophores. Unlike Zygomycota, which produce spores internally within a sporangium, the Ascomycota produce the spores externally as conidia. Ascomycota include a number of economically and ecologically important fungi. Perhaps the commercially most important fungi are the yeasts. The morels and truffles are highly prized delicacies. Most of the red and brown molds that cause food spoilage belong to this phylum. Fungi that cause Powdery mildew of grapes, Dutch elm disease, chestnut blight, etc. belong to this group. Basidiomycota (Club fungi) Club fungi include the mushrooms, puffballs, shelf fungi, and important plant pathogens – the rusts and smuts. Members of Basidiomycota play a central role in the decomposition of plant litter, often contributing twothirds of the living biomass in the soil. The mycelium of these fungi is always septate but perforated. The pore of the septum has an inflated barrel-shaped margin called a dolipore. The spores produced by these fungi, following meiosis, are called basidiospores, and are borne on a club-shaped structure called basidium. Deuteromycota (Fungi Imperfecti) These are an artificial assemblage of fungi for which only the asexually reproducing state is known. This may be because the sexual phase has not been discovered as yet, or has been lost in the course of evolution. The economically important fungi, such as Penicillium and Aspergillus belong to Deuteromycota. Some of these fungi produce aflatoxins that are highly carcinogenic. They have often been called as ‘Fungi Imperfecti’ because they were believed to be ‘imperfect’ members among the sexually reproducing ‘perfect’ organisms. When the sexual (i. e. ‘perfect’) phase in the life cycle of these forms is discovered, most of them seem to belong to Ascomycota, and a few to Basidiomycota or Zygomycota. Like Ascomycota, they reproduce asexually by means of conidia.