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Real-Time PCR Probe Design
Real-Time PCR Probe Design

Low and High Nucleic Acid Content Bacteria: Reality or
Low and High Nucleic Acid Content Bacteria: Reality or

... incorporation and cell sorting experiment it was found that HDNA cells are active and live while LDNA cells are inactive and dead. They argued, “if the LDNA particles include active bacteria, why should there be a clear separation between both (high and low fluorescence, HDNA and LDNA) bacterial gro ...
DNA-Sorb-B
DNA-Sorb-B

and Transfer of Ruminococcus pasteurii Schink 1984 to
and Transfer of Ruminococcus pasteurii Schink 1984 to

... chromatography by using methanol-pyridine-water-10 M HCI (32:4:7:1, vol/vol/ volhrol). The amino acids and peptides in the partial and total hydrolysates were identified by their mobilities and staining characteristics with ninhydrin spray after two-dimensional chromatography (28). The resulting “fi ...
patrick_tb_ch17
patrick_tb_ch17

... taken on to the active triphosphate by the action of cellular kinases. Aciclovir is a poor substrate for cellular thymidine kinase and so the drug is activated more slowly in non-infected cells. There is certainly a selective uptake of aciclovir into infected cells, but the drug can still enter non ...
Molecular cloning of a cDNA encoding a novel Ca2+
Molecular cloning of a cDNA encoding a novel Ca2+

... E. coli host cells rather than CAN activity; it is conceivable that CAN might play a role as either an activator or an inducer of the endogenous E. coli nuclease. However, this assay has been successfully employed to prove the activities of Nuc nuclease [3], a thermostable nuclease from Staphylococc ...
Significant enhancement of fatty acid composition in seeds of the
Significant enhancement of fatty acid composition in seeds of the

... The expected ability of the Cas9/sgRNA system to cause gene mutations in the FAD2 genes of Arabidopsis and Camelina plants was confirmed by DNA sequencing. Sequence analyses of DNA from leaf and seed samples (Data Set S2) confirmed multiple mutations over multiple generations at each of the three ta ...
Sulrfobacillus disuljidooxidans sp. nov., a New Acidophilic, Disulfide
Sulrfobacillus disuljidooxidans sp. nov., a New Acidophilic, Disulfide

... used for reference purposes with regard to molecular DNA analysis. Modified 9K medium (9K-EL) (32) was used as the basalt growth medium for strain SD-11, and the ferrous sulfate used as the energy source in 9K medium was replaced by organic and inorganic substrates at a final concentration of 2.5 g/ ...
Physical mapping shows that the unstable oxytetracycline gene
Physical mapping shows that the unstable oxytetracycline gene

... The agarose containing the 300 kb AseI-J band was excised from a gel. DNA was eluted, partially digested with MboI and used to construct a cosmid bank in sCos-1. Forty clones were obtained and were ordered by cross-hybridization. This yielded a contig in fragment AseI-J which was spanned by 9 cosmid ...
De Bruijn Graphs for DNA Sequencing (Part 1)
De Bruijn Graphs for DNA Sequencing (Part 1)

... •  Problem: Given a set of strings, find a shortest string that contains all of them •  Input: Strings f1, f2,…., fn •  Output: A string s that contains all strings f1, f2,…., fn as substrings, such that the length of s is minimized ...
Solid phase peptide synthesis (SPPS), strategies, resins and
Solid phase peptide synthesis (SPPS), strategies, resins and

No Slide Title
No Slide Title

...  A.A. degraded to acetoacetyl-CoA and or acetyl-CoA (6 a.a.)  Yield ketone bodies in the liver  In untreated diabetes mellitus, liver produces large amounts of ketone bodies from both fatty acids and the ketogenic a.a.  Exclusively ketogenic: Leu and Lys ...
Microbial Diversity in Prince Edward County`s Soil Microbiome
Microbial Diversity in Prince Edward County`s Soil Microbiome

... Microbial Diversity in Prince Edward County’s Soil Microbiome ...
crayfish dissection
crayfish dissection

... the diagram on the next page, its body is divided into two main parts, the cephalothorax and the abdomen. The cephalothorax consists of the cephalic (or head) region and the thoracic region. The part of the exoskeleton that covers the cephalothorax is called the carapace. The abdomen is located behi ...
9.3 Polymers - Central Lyon CSD
9.3 Polymers - Central Lyon CSD

... The monomers in a nucleic acid are nucleotides. • A DNA nucleotide has three parts: a phosphate group, deoxyribose sugar, and an organic base. • When two strands of DNA line up, pairs of bases are arranged like the rungs of a ladder. ...
Unit 1 (ch 3)
Unit 1 (ch 3)

... The 4 single bonds of carbon point to the corners of a tetrahedron. Figure 3.1, top part Copyright © 2003 Pearson Education, Inc. publishing as Benjamin Cummings ...
Soil Biology and Biochemistry
Soil Biology and Biochemistry

... synthesis of A. brasilense UAP 14 strain) did not show any significant effect on the aminotransferase activity. To identify the aminotransferase enzymes that react with tryptophan, crude extracts and ammonium sulfate fractions were run on PAGE under non-denatured conditions. Our data clearly demonst ...
Alisch RS, Wang T, Chopra P, Visootsak J, Conneely KN, Warren ST . Genome-wide analysis validates aberrant methylation in fragile X syndrome is specific to the FMR1 locus. BMC Med Genet. 2013 Jan 29;14:18. doi: 10.1186/1471-2350-14-18.
Alisch RS, Wang T, Chopra P, Visootsak J, Conneely KN, Warren ST . Genome-wide analysis validates aberrant methylation in fragile X syndrome is specific to the FMR1 locus. BMC Med Genet. 2013 Jan 29;14:18. doi: 10.1186/1471-2350-14-18.

... data suggest that the FXS-associated hypermethylation of the FMR1 promoter is locus-specific and does not alter DNA methylation elsewhere in the genome. To corroborate these findings, we derived a total of ten iPS cell lines from fibroblasts of two FXS patients (FXS-iPS) and two control individuals ...
Welcome to Class 14 - (canvas.brown.edu).
Welcome to Class 14 - (canvas.brown.edu).

... Through the reactions of nitrification and denitrification, eventually, all nitrogen in the biosphere would be converted to N2, if it were not for:! ...
08_chapter 1
08_chapter 1

... of the similar abundance values of complementary nucleotides. But Szybalski and his collegues (1966) had already described that purine richness predominated in the coding strand and pyrimidine richness predominated in the non-coding strand. In support of this, Smithies et al (1981) reported strand c ...
Lecture 27
Lecture 27

... ring rather than being lost to solvent. Mechanism is called the NIH shift 1st characterized by scientists at NIH ...
Carbohydrates
Carbohydrates

... - rich in amino-acids, - trace elements and vitamins (Vitamin B-s) - mineral- and trace elements - therapeutically: stimulating, invigorating and exhilarating, restabilizes (a positive effect on the nerves) and generally revitalizes . restore the appetite ...
RNA Express Workflow - support.illumina.com
RNA Express Workflow - support.illumina.com

... expression, fold change, standard error, p-value, etc.) is reported for each gene. The script writes a table of raw counts across all replicates and plots a gene-level heat map sorted by hierarchical clustering. This heat map contains up to 5000 significantly differentially expressed genes, q < 0.05 ...
Extension Activity 1: Plasmid Mapping STUDENT MANU AL
Extension Activity 1: Plasmid Mapping STUDENT MANU AL

... used in the DNA fingerprinting activity were constructed from the same pTZ18U plasmid parent but had different foreign fragments of DNA inserted into them. In the DNA fingerprinting exercise, only two restriction enzymes were used, but other enzymes could also have been used to cut these plasmids. T ...
IS1245 restriction fragment length polymorphism typing - HAL
IS1245 restriction fragment length polymorphism typing - HAL

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Nucleic acid analogue



Nucleic acid analogues are compounds which are analogous (structurally similar) to naturally occurring RNA and DNA, used in medicine and in molecular biology research.Nucleic acids are chains of nucleotides, which are composed of three parts: a phosphate backbone, a pucker-shaped pentose sugar, either ribose or deoxyribose, and one of four nucleobases.An analogue may have any of these altered. Typically the analogue nucleobases confer, among other things, different base pairing and base stacking properties. Examples include universal bases, which can pair with all four canonical bases, and phosphate-sugar backbone analogues such as PNA, which affect the properties of the chain (PNA can even form a triple helix).Nucleic acid analogues are also called Xeno Nucleic Acid and represent one of the main pillars of xenobiology, the design of new-to-nature forms of life based on alternative biochemistries.Artificial nucleic acids include peptide nucleic acid (PNA), Morpholino and locked nucleic acid (LNA), as well as glycol nucleic acid (GNA) and threose nucleic acid (TNA). Each of these is distinguished from naturally occurring DNA or RNA by changes to the backbone of the molecule.In May 2014, researchers announced that they had successfully introduced two new artificial nucleotides into bacterial DNA, and by including individual artificial nucleotides in the culture media, were able to passage the bacteria 24 times; they did not create mRNA or proteins able to use the artificial nucleotides. The artificial nucleotides featured 2 fused aromatic rings.
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