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Macrophage programming and host responses to bacterial infection Xiao Wang 王潇 Doctoral thesis in Molecular Genetics Department of Molecular Biosciences, The Wenner-Gren Institute Stockholm University, 2016 Cover illustration: H&E staining picture of murine lungs infected with Mycobacterium.bovis BCG and fluorescence microscopic picture of macrophage fusion are integrated into a swedish dala horse. ©Xiao Wang, Stockholm University 2016 ISBN: 978-91-7649-426-4 Printed in Sweden by Holmbergs, Malmö 2016 Distributor: Department of Molecular Biosciences, the Wenner-Gren Institute ii “ Everything you see exists together in a delicate balance. ” -- Mufusa, The Lion King (1994) iii SAMMANFATTNING Makrofager är dynamiska och heterogena immunceller som spelar en viktig roll i immunförsvaret vid bakteriella infektioner. Olika bakteriella patogener, såsom Neisseria meningitidis och Mycobacterium tuberculosis, kan ändra värdens immunrespons genom att interferera med makrofagers differentiering och polarisering. Målet med den här avhandlingen har varit att förstå makrofagers roll i sjukdomsprocessen vid bakteriella sjukdomar. I artikel 1, fann vi att NhhA, ett membranprotein som återfinns på ytan av meningokocker, kan aktivera makrofager genom TLR4-beroende och TLR4oberoende mekanismer. I artikel 2, beskrev vi hur NhhA aktiverar monocyter genom receptorn TLR2 och stimulerar produktion av cytokinerna IL10 och TNF. Detta sker genom att aktivera signalvägarna ERK samt JNK och resulterar i differentiering av monocyterna till makrofager med hög expression av CD200R. Dessa makrofager var associerade med immunhomeostas och asymptomatisk kolonisation i nasofarynx. I artikel 3, undersökte vi det humana cellytsproteinet CD46 och dess roll i regleringen av apoptos, differentiering och polarisering av makrofager. Vi fann att makrofager som uttrycker CD46 har fenotypen M1. Dessa M1-makrofager producerade övervägande proinflammatoriska cytokiner såsom IL-6, TNF och IL-12 vid meningokockinfektion eller stimulering med lipopolysackarid. Genom att använda en experimentell djurmodell för meningokocksepsis kunde vi bekräfta en roll för dessa makrofager vid uppkomsten av septisk chock. M. tuberculosis, en gram-positiv bakterie, orsakar många dödsfall framförallt i utvecklingsländer. I artikel 4 fann vi att makrofager som uttrycker CD46 har förbättrad överlevnadsförmåga, hög förmåga att döda bakterier och tenderar att forma gigantiska flerkärniga celler vid kronisk tuberkulosinfektion. En ökad förståelse för fysiopatologin vid bildningen av granulom kan bidra till utvecklingen av nya läkemedel mot tuberkulos. iv SUMMARY Macrophages are dynamic, plastic, and heterogeneous immune cells that play an important role in host immune defense against bacterial infection. Various bacterial pathogens, such as Neisseria meningitidis and Mycobacterium tuberculosis, can modulate host immune responses by interfering with macrophage differentiation and polarization. The focus of this thesis was to understand the role of macrophages in the pathogenesis of bacteria-induced diseases, which has important implications in the search for novel therapeutic strategies to control those infectious diseases. In Paper I, we found that NhhA, a conserved meningococcal outer membrane protein, can activate macrophages through both Toll-like receptor 4 (TLR4)-dependent and -independent pathways. In Paper II, we demonstrated that NhhA activates monocytes through TLR2 and triggers autocrine IL10 and TNF production through the ERK and JNK pathways, which skew monocyte differentiation into CD200Rhi macrophages. These immune homeostatic macrophages are associated with nasopharyngeal carriage of meningococci. In Paper III, we examined the role of human CD46, a ubiquitous transmembrane protein, in regulating macrophage apoptosis, differentiation, and functional polarization. We revealed that macrophages expressing CD46 exhibit an M1 phenotype and are prone to generate proinflammatory cytokines, such as IL-6, TNF, and IL-12, upon lipopolysaccharide challenge or meningococcal infection. The important role of these macrophages in the development of septic shock was further confirmed by in vivo studies using a CD46 transgenic mouse disease model. M. tuberculosis, a gram-positive bacterium, remains an important cause of death in developing countries. In Paper IV, we reported that murine macrophages expressing human CD46 exhibit enhanced viability and bactericidal capacity and are prone to form granulomas following chronic mycobacterial infection. Increased understanding of host factor roles in the physiopathology of tuberculosis is critical for the design of effective vaccines and new drugs. v vi LIST OF PAPERS The thesis is based on the papers listed below, which will be referred to by Roman numerals in the text. I. Sjölinder M*, Altenbacher G*, Wang X, Gao Y, Hansson G and Sjölinder H. The meningococcal adhesin NhhA provokes proinflammatory responses in macrophages via TLR4-dependent and independent pathways. Infect Immun 2012;80:4027–33. * MS and GA contributed equally. II. Wang X, Sjölinder M, Gao Y, Wan Y and Sjölinder H. Immune homeostatic macrophages programmed by the bacterial surface protein NhhA potentiates nasopharyngeal carriage of Neisseria meningitidis. mBio 2016;7:e01670-15. III. Wang X, Ding Z, Sjölinder M, Wan Y and Sjölinder H. CD46 accelerates macrophage-mediated host susceptibility to meningococcal sepsis. (Manuscript under revision) IV. Wang X, Sjölinder M, Wan Y, De Rovere M, Petursdottir D, Fernández C and Sjölinder H. Protective role of CD46 against mycobacterial infection through functional modulation of macrophages. (Manuscript under revision) Paper not included in this thesis: Chen Y, Sjölinder M, Wang X, Altenbacher G, Hagner M, Berglund P, Gao Y, Lu T, Jonsson AB and Sjölinder H. Thyroid hormone enhances nitric oxide-mediated bacterial clearance and promotes survival after meningococcal infection. PLoS One. 2012;7:e41445-14. Permission of reprints was obtained from the publishers. vii ABBREVIATIONS aHUS AP-1 BCG CCL CD46 CXCL DC Erk G-CSF GM-CSF Hsp IRF IL IRAK-4 JNK LTA LOS LPS MARCO M-CSF MV MyD88 NF-κB NhhA NLR PAMP PRR RIP SCR TB TGF-β TIRAP TLR TNF TRAM TRIF viii Atypical hemolytic uremic syndrome Activator protein-1 Bacillus Calmette–Guérin Chemokine (C-C motif) ligand Cluster of differentiation 46; a membrane cofactor protein Chemokine (C-X-C motif) ligand Dendritic cell Extracellular-signal-regulated kinases Granulocyte colony-stimulating factor Granulocyte-macrophage colony-stimulating factor Heat shock protein Interferon regulatory factor Interleukin IL-1 receptor-associated kinase-4 c-Jun N-terminal kinase Lipoteichoic acid Lipooligosaccharide Lipopolysaccharide Macrophage receptor with a collagenous structure Macrophage colony-stimulating factor Measles virus Myeloid differentiation primary response gene (88) Nuclear factor kappa-light-chain-enhancer of activated B cells Neisseria hia/hsf homologue A Nucleotide oligomerization domain (NOD)-like receptor Pathogen-associated molecular pattern Pattern recognition receptor Serine/threonine kinase receptor interacting protein Short consensus repeats Tuberculosis Transforming growth factor beta TIR domain-containing adaptor protein Toll-like receptor Tumor necrosis factor TRIF-related adaptor molecule TIR domain-containing adaptor protein inducing IFN-β CONTENTS SAMMANFATTNING ................................................................................iv SUMMARY.................................................................................................... v LIST OF PAPERS ...................................................................................... vii ABBREVIATIONS ................................................................................... viii CONTENTS ..................................................................................................ix INTRODUCTION ......................................................................................... 1 Chapter 1 Macrophages and bacterial infection ................................ 1 1.1 Bacterial recognition...................................................................... 1 1.2 Macrophage polarization ............................................................... 2 1.3 Resident and inflammatory macrophages...................................... 3 1.4 Factors governing functional differentiation of macrophages ....... 4 1.5 Macrophage cell death in bacterial infections ............................... 5 Chapter 2 CD46 ..................................................................................... 7 2.1 CD46 as a complement factor ........................................................... 7 2.2 CD46 as a pathogen receptor ............................................................ 8 2.3 CD46 as an immune regulator ........................................................... 9 2.4 CD46+/+ transgenic mice as an animal disease model ..................... 10 Chapter 3 Neisseria meningitidis ........................................................ 12 3.1 Carriage and invasive disease ......................................................... 12 3.2 Virulence factors ............................................................................. 13 3.2.1 LOS ..................................................................................................... 13 3.2.2 NhhA ................................................................................................... 14 3.3 Macrophage activation upon meningococcal infection ................... 14 Chapter 4 Mycobacteria ........................................................................ 17 4.1 Carriage and disease ........................................................................ 17 4.2 Mycobacteria ................................................................................... 18 4.3 Mycobacteria and macrophage interaction ..................................... 19 4.3.1 Bacterial recognition and internalization ............................................ 19 4.3.2 Intracellular survival of M. tuberculosis in macrophages ................... 20 4.3.3 Cell death of macrophages during M. tuberculosis infection .............. 21 4.3.4 Granuloma formation .......................................................................... 23 AIMS OF THE STUDY .............................................................................. 25 RESULTS AND DISCUSSION ................................................................. 26 FUTURE PERSPECTIVE ......................................................................... 32 ACKNOWLEDGEMENTS ........................................................................ 34 REFERENCES ............................................................................................ 36 ix INTRODUCTION Chapter 1 Macrophages and bacterial infection Bacteria, as the dominant life form on Earth, inhabit every ecological niche including the human body [1]. Although most bacteria are harmless or beneficial commensals co-evolving with the host, some are pathogenic [2]. Mammalian innate immunity mediated by phagocytes such as neutrophils, macrophages, and dendritic cells (DCs) provides the first barrier protecting the host from bacterial infection [3]. Macrophages were first described by Elie Metchnikoff in 1893 for their phagocytic feature during tissue inflammation [4]. Today there is a broad understanding that macrophages are heterogeneous populations with versatile tissue-specific or niche-specific functions [5]. These functions range from maintaining dedicated tissue homeostasis through the clearance of apoptotic cell debris or iron processing to responding to infection through ingesting and eliminating pathogens or modulating inflammation by cytokine production [4]. In addition to their central roles in innate immunity, macrophages bridge innate and adaptive immunity by collecting and presenting antigens [6]. In response, bacteria manipulate host defense mechanisms to benefit their own survival, replication, or transmission [5]. 1.1 Bacterial recognition Host cells express a range of microbial sensors called pattern recognition receptors (PRRs) to recognize pathogen-associated molecular patterns (PAMPs), transduce signals, and activate the immune system [3]. Toll-like receptors (TLRs) are phylogenetically conserved receptors usually expressed on monocytes, macrophages, and DCs that recognize PAMPs [7]. Ten TLRs have been identified in humans and 13 in mice [3]. TLR3, 7, 8, and 9 are localized in the cytoplasm and mainly detect microbial nucleic acids. The other TLRs reside on the surface of the plasma membrane; of these, TLR2 and TLR4 are the best defined [7]. TLR4 binds lipopolysaccharide (LPS) [8] and heat shock protein (Hsp) 60 [9], whereas TLR2 recognizes a broad range of PAMPs, including LPS, lipoteichoic acids (LTA), lipoproteins, lipomannans, liparabinomannans, and peptidoglycan [10]. By forming heterodimers with other TLRs, TLR2 can extend the specificities in ligand recognition. For instance, TLR2/1 dimers recognize triacylated lipoproteins, whereas TLR2/6 dimers detect diacylated lipoproteins [10]. The other TLRs are believed to function as homodimers [11]. 1 Activation of TLR signaling is initiated with the recruitment of adaptor proteins via the cytoplasmic Toll/interleukin (IL)-1 receptor (TIR) domain. Four adaptor proteins have been identified to be involved in TLR signaling, including myeloid differentiation primary response protein 88 (MyD88), TIR domain-containing adaptor protein (TIRAP), TIR domain-containing adaptor protein inducing IFN-β (TRIF), and TRIF-related adaptor molecule (TRAM) [11]. The MyD88-dependent pathway is utilized by all TLRs expect TLR3 [12]. Upon stimulation with PAMPs, MyD88 associates with TIRAP and recruits IL-1 receptor-associated kinase-4 (IRAK-4), which activates IRAK1 by phosphorylation [13]. Subsequently, IRAK-1 and IRAK-2 associate with TRAF6 and promote its ubiquitination [14]. The ubiquitinated TRAF6 forms a complex with TAK1 and activates the IKK complex, leading to NFκB activation, or activates MAP kinase (JNK, p38, ERK) to trigger AP-1 activation [14]. Activation of these nuclear factors results in the production of a series of proinflammatory cytokines such as TNF, IL-12, IL-23, and IL1 [11]. To achieve full ligand sensitivity, other co-receptors are sometimes essential for TLR signaling activation. For instance, the recognition of LPS by TLR4 requires LPS-binding protein (LBP) association with MD2 and CD14 on macrophages [15]. In addition to the MyD88-dependent pathway, TLR4 ligands can utilize the other two adaptors, TRAM and TIRF, to trigger IRF3 activation and type I interferon production in a MyD88-independent manner [16]. Apart from TLRs, many other PRRs play important roles in bacterial recognition. The mannose receptor (CD206) primarily presents on the surface of macrophages and immature DCs, recognizes repeated mannose residues presented on pathogens, and mediates phagocytosis [17]. Macrophage scavenger receptors (including SR-AI, SR-AII, MARCO, CD36, and CD163) sense low-density lipoprotein, LPS, and LTA and promote removal of apoptotic cells by phagocytosis [18]. The nucleotide oligomerization domain (NOD)-like receptors (NLRs) are intracellular PRRs containing leucine-rich repeats in the C-terminal region. They recognize a range of pathogens in the cytoplasm and trigger the production of inflammatory cytokines such as IL1β [19]. NOD1 and NOD2 are well-described NLRs that bind to the peptidoglycan components meso-diaminopimelic acid and muramyl dipeptide, respectively, and synergize with TLR activation [20]. 1.2 Macrophage polarization Macrophages are highly heterogeneous immune cells. Traditionally, a binary classification based on inflammatory states is used to define macrophage subgroups when they are stimulated in polarizing conditions. Depending on the distinct microenvironmental signals, macrophages can be polarized into classically activated macrophages (M1) or alternatively activated macro2 phages (M2) [21]. M1, typically induced by IFN-γ or LPS, are efficient at killing microbes by producing nitric oxide, reactive oxygen species, and lysosomal enzymes [22]. They can also secret abundant proinflammatory mediators such as TNF, IL-12, and IL-1, which is essential for controlling acute infectious diseases [23]. Activated M1 become efficient APC cells through expressing increased levels of MHC II molecules and costimulatory molecules such as CD80/86 to trigger Th1 and Th17 cell differentiation. Th1 cell-attracting chemokines such as CXCL9 and CXCL10 are also expressed by M1 [22]. M2 display anti-inflammatory functions and high phagocytic capacity, which are associated with tissue remodeling and anti-parasite defense [24]. Correlates of the M2 phenotype include the production of IL-10, arginase, CD206, CD163, YM1, FIZZ1 (in the mouse), CCL17, and CCL22 [24]. M2 are further classified into at least three polarization groups: M2a is triggered by Th2 cytokines such as IL-4 and IL-13; M2b is induced by LPS and immune complexes or IL-1R ligands; M2c is generated by stimulation with IL-10, TGF-β, and glucocorticoid hormones [22]. In addition to M1 and M2 subtypes, there are tumor-associated macrophages involved in either pro-tumor or anti-tumor immunity [25]. Since the surface marker expressions display large overlaps, detecting specific gene expression profiles is a useful approach to distinguish macrophage subsets. For instance, the transcriptional factor IRF5 directly activates IL-12 and inhibits IL-10 gene encoding, which is taken as a M1 marker [26]. In contrast, IRF4 competes with IRF5 for binding to MyD88 and is required for regulating M2 polarization [27]. However, although such dichotomous classifications might reflect the extreme states, they cannot represent the complex in vivo environment for wide variations in the transition or distinct states. The real host environment contains a range of cytokines and growth factors, whose cooperation or antagonism could result in many more functional macrophage phenotypes. For instance, several bacteria or bacterial components such as Haemophilus ducreyi [28], Helicobacter pylori [29], and meningococcal adhesin Neisseria hia/hsf homologue A (NhhA) (Paper II) have been found to manipulate macrophage polarization to a specific phenotype with a mixture of M1/M2 features. The transformation between M1 and M2 has also great impact on the pathogenesis of many infectious diseases [30]. Endotoxin tolerance is a representative example wherein the initial M1 phenotype in sepsis patients changes to an immunosuppression or anti-inflammatory phenotype [31]. 1.3 Resident and inflammatory macrophages Macrophages are present in every organ system as resident tissue macrophages to maintain tissue homeostasis by surveiling signals from the local 3 environment [4]. They are given specific names depending on the locations, for instance, the Kupffer cells in the liver, alveolar and interstitial macrophages in the lungs, sinus histiocytes in the spleen and lymph nodes and microglial cells in the central nervous system [32]. Transcriptional profiling analyses showed that resident tissue macrophages have high heterogeneity and minimal overlaps in transcriptional patterns, which are associated with distinct functions [33]. Monocytes formed in the bone marrow and blood circulation replenish a large pool of cells potentially differentiating to macrophages and DCs in response to environmental cues during infection or in the steady state [4]. The general paradigm was that all tissue macrophages are end cells derived from the monocytic progenitor in bone marrow. However, new studies proved that monocyte-differentiated resident macrophages are only one of the lineages during homeostatic adaptions [32]. The major tissue macrophage populations actually originate from the yolk sac. These embryo-derived resident macrophages can persist throughout life and undergo proliferation [32]. In addition to their tissue-specific homeostatic functions, resident macrophages can contribute to initial inflammation in response to tissue injury or infection [34]. For instance, during acute infection in the peritoneal cavity, the resident peritoneal macrophages recognize the pathogens and produce a series of cytokines and chemokines to help eliminate the invaders [34]. However, the numbers of those macrophages are rapidly lost thereafter, which is referred as “disappearance reaction” [35]. Inflammatory monocytes are then recruited from the circulation by CCL-2 and then differentiate into M1-like macrophages, which are also called inflammatory macrophages [36]. These processes were also observed in meningococci-infected murine peritoneal cavity (Paper II). To neutralize the excessive inflammatory response, macrophages can undergo apoptosis or switch into immune homeostatic M2 phenotypes, which produce anti-inflammatory mediators and promote the clearance of apoptotic cells [37]. Intriguingly, the lost resident macrophages group can be restored gradually by the supplement of monocytederived cells, in situ proliferative cells, or cells derived from dedicated precursors [38]. 1.4 Factors governing functional differentiation of macrophages Monocytes are highly plastic and express various receptors that sense environmental stimuli and mediate their differentiation into macrophages or DCs [39]. Generally, M1 and M2 can be preferentially derived from CCR2hi Ly6C+ inflammatory monocytes and CCRlow Ly6C- resident monocytes, respectively [37]. The hemopoietic growth factors macrophage colonystimulating factor (M-CSF) and granulocyte-macrophage colony-stimulating factor (GM-CSF) are the central factors driving monocyte/macrophage dif4 ferentiation and proliferation [40]. M-CSF is constitutively expressed and released in the serum and recognizes the CSF-1 receptor (CSF-1R) presented on monocytes or macrophages to induce their development and proliferation [40]. GM-CSF plays an important role in monocyte/macrophage development, especially in the lung and peritoneal cavity in vivo [37]. GM-CSF stimulation results in M1-like inflammatory polarization, whereas M-CSF stimulation promotes macrophage differentiation into the homeostatic or anti-inflammatory M2-like phenotype [41]. In the presence of IL-4, GMCSF can induce monocyte differentiate into DCs [42]. Recombinant M-CSF and GM-CSF are hence extensively utilized in generating murine and human monocyte-derived macrophages or DCs in vitro [41]. Many other cytokines have been shown to regulate macrophage differentiation. Endogenous IL-15 produced via TLR activation can promote monocyte differentiation into macrophages [43]. IL-32 can trigger monocyte differentiation into macrophages with both M1 and M2 phenotypes or CD1b+ DC-like cells [44,45]. IL-10 blocks the formation of DCs [46] and guides macrophage differentiation into an M2-like phenotype [47]. IL-6 can switch monocyte differentiation from DCs to macrophages via promoting the expression of M-CSF receptors [48]. Furthermore, IL-12 combined with IL-18 induce the formation of macrophages from monocytes [49]. 1.5 Macrophage cell death in bacterial infections In response to infectious stimuli, macrophages can be tightly regulated and undergo programmed cell death such as apoptosis, which may restrict bacterial growth and eliminate the replicative niches for some intracellular pathogens [50]. However, the crafty pathogens can modulate macrophage cell death pathways for their own benefit. Passive and uncontrolled cell death such as necrosis can be pathogenic and lead to tissue damage and increased bacterial dissemination [51]. Host cell death modes are hence important for tissue homeostasis and immune regulation. Apoptosis is a classical programmed cell death process, which occurs without triggering inflammatory responses [52]. The morphological features of apoptosis include preserved plasma membrane integrity, cell shrinkage, chromatin condensation, and nuclear fragmentation [52]. Apoptotic cells are subsequently taken up by neighboring uninfected macrophages through efferocytosis [53], which avoids damage to surrounding cells by the leaked apoptotic debris. Caspases, including the initiator caspases (capsase-2, -8, -9, -10) and the effector caspases (caspase-3, -6, -7), are the central apoptotic regulators [54]. Activation of a caspase cascade can be triggered by the TNF- or FasL-mediated extrinsic pathways or the mitochondria-associated intrinsic pathways [54]. 5 Necrosis is a different cell death mode associated with the loss of cell membrane integrity and uncontrolled excretion of inflammatory mediators [55]. It is morphologically characterized by nuclear and cellular swelling and disorganized DNA fragmentation without chromatin condensation [56]. The necrotic process was conventionally thought to be passive and accidental; however, recent evidence showed that necrosis could also occur in a programmed fashion. Necroptosis is caspase-independent programmed necrotic cell death, which is mediated by the phosphorylation of RIPK1/3 and pseudokinase MLKL [57]. Signaling activation leads to calpain activation, lysosome destabilization, cathepsin release, and ROS production, which subsequently result in necrotic cell death [57]. In contrast to apoptosis, necroptosis is highly inflammatory and leads to release of cellular content [55]. This cell death mode can harm the host due to the failure in controlling bacterial dissemination, which has been shown in Salmonella enterica [58] and mycobacterial infection [59]. 6 Chapter 2 CD46 CD46, also known as the membrane cofactor protein (MCP), is a pleiotropic multifunctional type I transmembrane protein ubiquitously expressed on all nucleated human cells. It was primarily identified as co-regulator of complement activation [60] and later as a pathogen magnet for binding to a range of microbes [61] and an immune regulator involved in modulating the adaptive immune response [62]. The broad spectrum of CD46 functions can be attributed to the high structural heterogeneity of the protein [60] (Figure 1). Various isoforms of CD46 resulting from alternative splicing have been identified. As a transmembrane protein, CD46 has an extracellular domain comprising four short consensus repeats (SCR1–4) and glycosylated region B and/or C rich in serine, threonine, and proline (STP). One of two cytoplasmic tails, CYT-1 or CYT-2, is connected to the extracellular portion through a transmembrane region [60]. CYT-1 and CYT-2 interact with effector proteins and appear to respond differentially to tyrosine phosphorylation to mediate distinct T cell activations [63]. A variety of diseases from chronic diseases such as multiple sclerosis [64], rheumatoid arthritis [65], and asthma [66] to acute infections such as bacterial sepsis [67,68] are associated with deficiency or activation of CD46 function, indicating the importance of CD46 in maintaining human health. Figure 1. Structure of CD46. (Adapted from [60]) 2.1 CD46 as a complement factor The complement system is an ancient innate defense mechanism associated with a biochemical cascade that assists in killing pathogens, tagging patho7 gens by opsonization, and recruiting inflammatory cells to eliminate the marked microbes [69]. However, complement activation can cause host damage if it fails to distinguish between self-cells and enemies. Hence, the complement system must be tightly regulated, normally by a number of serum and membrane-bound complement regulatory proteins [70]. During the screen for novel C3b-binding proteins, CD46 was discovered as a complement inhibitor in 1986 [71]. Indeed, individuals harboring mutations in CD46 are predisposed to atypical hemolytic uremic syndrome (aHUS), a disease associated with complement dysregulation [72]. The N-terminal extracellular SCR domains of CD46 harbor the binding sites for complement components. CD46 binds to C3b and C4b, leading to their proteolytic cleavage by serine protease factor I into the fragments C3bi and C4c/C4d, respectively [73]. The cleavage products are inactivated and incapable of continued complement activation. This process irreversibly prevents the convertasemediated formation of C3 and C5 and protects host cells from autologous complement attack [74]. This discovery has provided significant insights into the treatment of patients with complement dysregulations. 2.2 CD46 as a pathogen receptor Beyond complement regulation, CD46 also serves as an entry receptor for various human bacterial and viral pathogens, whose ligations promote pleiotropic downstream signaling activations and actions [75]. For instance, the viral hemagglutinin of measles virus (MV) binds the extracellular domain SCR1 and SCR2 of CD46 [76], and the fiber knob of adenovirus interacts with CD46 SCR2 [77]. SCR2 and SCR3 interact with human herpesvirus-6 (HHV-6) [78] and SCR3 is a binding site for Neisseria gonorrhoeae as well [79]. M protein is a streptococcal ligand for CD46 [80]. In addition, complement-opsonized uropathogenic Escherichia coli exploit the C3b binding site of CD46 to infect renal tubular epithelial cell [81]. Interactions between CD46 and certain pathogens can modulate different cellular responses, which will be discussed in the following section. CD46 expression is tightly regulated, and several pathogens can downregulate cellular levels of CD46 via different mechanisms such as shedding or internalization [68,82-84]. On epithelial cells [85] and T cells [86], the extracellular domain of CD46 can be cleaved by metalloproteinases and shed into the surrounding milieu, and its intracellular tails can be cleaved by the presenilin-gamma secretase enzymatic complex. Streptococcus pyogenes can trigger CD46 shedding from the epithelial cell surface, which is associated with apoptotic cell death [68]. Piliated Neisseria gonorrhoeae also binds to epithelial cells and induces shedding of the CD46 ectodomain in a metalloproteinase-dependent manner [83], whereas cross-linking CD46 by MV in8 duces a macropinocytosis-like process, leading to the internalization and degradation of CD46 in both lymphoid and non-lymphoid cells [87]. The downregulation of CD46 may associate with enhancing complement sensitivity of infected host cells and affect CD46-dependent antigen presentation and signal transduction [87]. 2.3 CD46 as an immune regulator CD46/CD3 costimulation regulates TCR signaling and induces T cell proliferation and activation, which was found as a breakthrough in 2001 [88]. Since then, extensive studies have focused on unraveling the role of CD46 in T cell immunity. Subsequent work showed that CD46 functions as a costimulatory molecule of TCR, inducing differentiation or activation of IL10-secreting Tr1 cells, a subset of regulatory T cells (Tregs) [89]. The immunoregulatory property of CD46 has also been supported by several infection studies. HHV-6 and MV interact with CD46 to suppress macrophage production of the Th1 cytokine IL-12 [90,91]. The MV-CD46 interaction also leads to an immunosuppressive response of DCs with deceased IL-12 production and diminished antigen-presentation capacity [71]. Streptococcal M protein activates CD46 and promotes granzyme B expression, leading to Tr1 like cell polarization [80]. The engagement of CD46 on CD4+ T cells also leads to Tr-1 like regulation in response to mycobacterial infection [92]. However, these findings that CD46 negatively controls adaptive immunity were unexpected because immunosuppression can harm the host during infection, which contradicts the protective role of CD46 as a complement regulator. Subsequently, it was demonstrated that CD46 engagement via C3b on CD4+ T cells during antigen presentation promotes an IFN-γ-secreting Th1 response in the presence of low IL-2 concentration [93]. IL-2 concentrations in the milieu appear to be critical to the outcome of CD46-driven T cell responses. CD46/CD3 activation can actually initially promote the generation of proinflammatory IFN-γ+ cells, and with high IL-2 concentration from an exogenous source, Th1 cells can switch into IL-10-producing Tregs [65]. Jagged1, a Notch family member, was shown to be critical for driving Th1 immunity through the ligation with CD46 [94]. CD46 hence regulates both proinflammatory and immunoregulatory T cell responses. Accordingly, patients deficient in CD46-dependent Th1 responses suffer from recurrent infections [94], whereas impaired CD46-mediated Tr1 differentiation has been found in patients with autoimmune diseases such as multiple sclerosis, asthma, and rheumatoid arthritis [65,66,95]. In addition, around 30% of CD46-deficient patients develop a syndrome called common variable immunodeficiency (CVID) [96]. These associations highlight the important role of CD46 in regulating human adaptive immunity. 9 Despite the sporadic studies in macrophages and DCs mentioned above, the role of CD46 in innate immunity remains ambiguous. IL-12 downregulation has been observed in MV-infected monocytes and macrophages and in HHV-6-infected macrophages [90,91]. However, enhanced IL-12 production has also been reported on macrophages by crosslinking their CD46 with several MV strains [97]. The distinct regulations might be dependent on the macrophage maturation stages and the multiple signaling pathways of CD46. Indeed, mouse macrophages transfected with human CYT-1 CD46 show higher production of nitric oxide, an infection-fighting agent produced in response to MV infection in the presence of IFN-γ, whereas macrophages expressing CYT-2 CD46 show reduced nitric oxide production [98]. In addition, CD46 can induce autophagy of epithelial cells upon recognition of pathogens including MV and group A Streptococcus via the CD46-Cyt-1GOPC pathway, which enables control of early pathogen infection [99]. The function of CD46 on neutrophils, monocytes, mast cells, and NK cells is hitherto unknown. Crosstalks between CD46 and TLR, NLR, or RIG-1 likely exist but remains unexplored. Future studies are needed to fill these important gaps and expand our understanding of the precise and finely tuned roles of CD46 as an immune regulator. 2.4 CD46+/+ transgenic mice as an animal disease model Several pathogenic ligands of CD46 including MV and Neisseria are humanspecific; thus, studying their pathogenesis in vivo is challenging [100]. Although the murine CD46 protein exists, it is selectively expressed in spermatids and shares only 45% identity with human CD46 [101]. Mice express a protein named crry/p65, which is a functional homologue to human CD46 in some complement regulatory features but not in T cell activation [101]. Hence, a transgenic mouse model universally expressing human CD46 was generated to study the pathogenesis of MV infection in 1996 [102], and similar models have been developed subsequently to investigate a range of other infections [65,68,103-105]. The CD46 transgenic mice are highly susceptible to MV, Neisseria meningitidis, Streptococcus pyogenes, and Streptococcus dysgalactiae [65,68,102,105]. In the case of meningococcal infection, CD46 transgenic mice show more severe bacterial sepsis with higher proinflammatory cytokine production and more efficient bacterial crossing of the bloodbrain barrier than wildtype (WT) mice [67,106]. We have discussed that the various isoforms of CD46 lead to different signaling pathways. The two CD46 cytoplasmic tails, CYT-1 and CYT-2, are expressed in most human cell types, with the exception of preferential CYT2 expression in the brain, kidneys, and testes [65]. To study the functional 10 differences between the two intracellular tails of CD46, transgenic mice specifically expressing either CYT-1 or CYT-2 were generated and used to investigate the T-cell dependent inflammatory reaction [63]. The two cytoplasmic tails exhibited divergent roles: CD46 CYT-1 activation inhibits inflammation, whereas CYT-2 activation enhances it [63]. These transgenic mouse models can also be useful tools in further studies, including examination of how the different isoforms of CD46 modulate innate immunity. 11 Chapter 3 Neisseria meningitidis 3.1 Carriage and invasive disease The Genus Neisseria include at least 25 species identified based on 16S rRNA technique [107]. Neisseria meningitidis (meningococcus) and Neisseria gonorrhoeae (gonococcus) are obligate human pathogens, whereas the other strains are either opportunistic human pathogens or commensal species colonize humans and other animals [107]. N. meningitidis is a gram-negative aerobic diplococcus that could be carried asymptomatically in the nasopharynx by approximately 10% of the population [108]. Since humans are the only known hosts, carriers are thought to be the major source of disease outbreak [108]. Once the bacteria penetrate the mucosal membrane and enter the bloodstream, they can cause various diseases. The most common manifestation is meningitis, but meningococcal septicemia has higher mortality rate [109]. N. meningitidis causes approximately 500,000 cases per year in the world and up to 50,000 deaths [110]. Without treatment, mortality can be as high as 70–90% among patients with meningococcal disease [111]. Because of the risks of severe morbidity and lethality, timely antibiotic therapy should be initiated in patients suspected of having meningococcal disease. A third-generation cephalosporin, Penicillin G, and chloramphenicol are the drugs of choice [107]. Despite the availability of antibiotics, case-fatality rates are still high at approximately 8–15% due to the rapid onset of disease [112]. About 10–20% of survivors suffer long-term sequelae including mental retardation, hearing loss, and loss of limb use [111]. N. meningitidis is divided into 13 serogroups based on the immunological reactivity of their capsular polysaccharides [113]. Serogroups A, B, C, W135, X, and Y cause virtually all associated invasive diseases [113]. Most cases in the western world are attributed to serogroups B and C, with serogroup B dominant, whereas serogroup A contributes to the majority of epidemic infection in the ‘African meningitis belt’ [114]. Effective polysaccharide vaccines are available against types A, C, W135, and Y but not type B meningococci since the capsular polysaccharide of these bacteria contains (2→8)-α-Neu5Ac, which is a self antigen [115]. Multicomponent meningococcal vaccine (Bexsero®) containing conserved protein components has been developed in recent years and showed good protection against meningococcal B strains in Europe [116] [117]. The major components in these novel meningococcal vaccines are Neisseria adhesion A (NadA), factor Hbinding protein (fHbp), Neisseria heparin-binding protein A (NhbA), and outer membrane vesicles (OMVs) derived from a meningococcal strain (NZ98/254) [117]. Despite great promise of new vaccines, cases of menin12 gococcal infection continue to be reported in both developed and developing countries due to the lack of universal vaccine coverage and increasing antibiotic resistance [116]. N. meningitidis colonizes the mucosal surface via a wide range of adhesins including pili, LOS, and Opa [107]. Around 50% of isolated carriage strains lack a capsule, which might enhance bacterial colonization in the human nasopharynx [118]. Biofilm formation is another strategy that protects bacteria from exposure to host bactericidal components such as IgA, IgG, and antimicrobial peptides [119]. In addition, N. meningitidis can trick the human IgA-mediated defense by producing numerous OMVs [120]. Acquisition of nutrients, especially lactate and iron, is essential for bacteria to sustain colonization in the nasopharynx. Since the host environment lacks free iron, N. meningitidis has developed a specific mechanism to obtain iron by binding to host iron-transport proteins, thus allowing the bacteria to survive in an optimized position [121]. Imbalance of immune homeostasis in the mucosal microenvironment leads to increased virulence and provokes invasive growth of bacteria. For instance, it has been shown that N. meningitidis can uptake proinflammatory cytokines IL-8 and TNF in a Type IV pili-dependent manner, which results in upregulation of bacterial virulence factors [122]. Increased ambient temperature can also act as a “danger signal,” enhancing expression of virulence genes and provoking invasive bacterial growth [123]. 3.2 Virulence factors N. meningitidis expresses a range of virulence factors that allow pathogenic strains to colonize the nasopharyngeal mucosa, invade into the blood stream, or cross the blood-brain barrier. These virulence factors include pili, capsular polysaccharide, lipooligosaccharides (LOS), and a number of surface membrane proteins such as porins, opacity proteins, NadA, App, MspA, and NhhA [124]. 3.2.1 LOS One of the most important virulence factors of Neisseria is endotoxin LOS. LOS is composed of a membrane-bound lipid A, a core oligosaccharide, and a polysaccharide O-antigen. It is referred as LOS since it lacks repeating polysaccharide O-antigens in contrast to the LPS of enteric bacteria [125]. LOS initiates the inflammatory response by binding to TLR4 with the lipid A moiety [126]. The outcome of meningococcal septic shock correlates with the level of LOS in circulation [127]. In addition, LOS is involved in other pathogenic processes such as cell adhesion, immune evasion, and serum resistance [128,129]. Antigenic variation is commonly exhibited in LOS, 13 aiding bacterial evasion of the host immune response [130]. Modifications of LOS with sialic acid in serogroups B, C, W-135, and Y allow the bacteria to resemble host cell surfaces that also express sialic acid, resulting in higher resistance to antibody, complement, or PMN-mediated killing [131,132]. 3.2.2 NhhA NhhA (57 kDa) is a multifunctional trimeric autotransporter adhesin expressed by N. meningitidis and N. lactamica but absent in N. gonorrhoeae [133]. It was first identified for its 47% similarity to the adhesin AIDA-I of E. coli and thereafter defined by its close homology to the Hia and Hsf adhesins of H. influenza [134]. It is also called meningococcal surface fibril (Msf) based on its sequence similarity to Haemophilus surface fibril (Hsf) [135]. As a typical autotransporter protein, NhhA contains three modular parts: a C-terminal translocator domain, an N-terminal signal domain, and a central passenger domain. The C-terminal 72 residues of NhhA are responsible for trimerization and translocation of the passenger domain on the bacterial surface [133]. NhhA plays a variety of roles during meningococcal infection including interacting with activated vitronectin, which leads to enhanced bacterial complement resistance [135,136]. Purified NhhA binds laminin and heparan sulfate, components of extracellular matrix, which may enhance bacteriahost cell interaction [133]. A previous study in our group showed that NhhA triggers macrophage apoptosis through caspase activation [137]. The role of NhhA in mediating bacterial colonization of the nasopharyngeal mucosa, evasion from phagocytosis, and complement-mediated killing has been demonstrated in vivo in a mouse disease model [136]. NhhA is a conserved protein expressed in the vast majority of disease-associated strains, although its expression levels vary. Because it can induce bactericidal antibodies, NhhA has been considered a potential vaccine candidate against meningococcal disease [138]. 3.3 Macrophage activation upon meningococcal infection Meningococci interact with a series of immune effector cells during colonization and invasion. Immune cells residing in the epithelium barrier of the human nasopharynx represent the first line of host protection from bacterial invasion [111]. Macrophages and DCs are the dominant cell types modulating the immune responses at this steady state [139,140]. Once bacteria enter circulation, neutrophils become the predominant cell type that they encounter with, especially during the acute phase of infection [141]. Monocytes/macrophages play important roles in eliminating pathogens, maintaining environmental homeostasis, and initiating adaptive immunity because of their functional heterogeneity [142]. 14 Interaction between meningococci and the myeloid cells is a crucial step in initiating immune activation. A recent study showed that whole N. meningitidis binds to galectin-3, increasing the interaction between bacteria and monocytes/macrophages [143]. Scavenger receptors are involved in recognizing meningococci and mediating phagocytosis [144]. The Class A scavenger receptor on macrophages can bind to meningococcal proteins NMB1220, NMB0278, and NMB0667 and enhance bacterial uptake [145]. Macrophage receptor with a collagenous structure (MARCO) is another type of scavenger receptor that can bind N. meningitidis and induce innate activation [146]. Sialic acid-interacting Ig-like proteins expressed on myeloid cells bind to meningococcal LOS, leading to enhanced macrophagocytosis of bacteria [147]. Type IV pili binding to serum C-reaction protein results in increased opsonin-dependent phagocytosis by macrophages and neutrophils [148]. A large panel of surface components on N. meningitidis can activate macrophages to generate inflammatory mediators. Lipid A on LOS interacts directly with MD-2 to activate TLR4, leading to cytokine production by human macrophages [149]. Although LOS is considered the major virulence factor, an LOS-deficient N. meningitidis mutant can still induce the proinflammatory response in immune cells, suggesting that other surface proteins also play important roles during infection [150]. NadA targets human monocyte/macrophages, induces formation of the Hsp90/Hsp70/TLR4 complex, and stimulates pro-inflammatory cytokine production [151]. PorB activates macrophages by directly binding to the TLR1/TLR2 complex in a MyD88-dependent manner and inhibits apoptosis [152]. Capsular polysaccharides can trigger the immune response through TLR2- and TLR4-MD2 pathways in macrophages [153]. NhhA can induce a series of proinflammatory cytokines in macrophages through TLR4-dependent and -independent mechanisms (Paper I). In addition to TLR2 and TLR4, TLR9 is an intracellular receptor that recognizes unmethylated CpG motifs on bacterial DNA and contributes to the activation of bactericidal activity [154]. Appropriate amounts of pro-inflammatory mediators are beneficial for the host through activation of neutrophils and attraction of Th1 and Th17 cells during bacterial infection. However, excessive production of those cytokines such as TNF and IL-1 can be pathogenic and lead to septic shock and organ failure [34]. Several studies have shown that high levels of cytokines including IL-6, IL-8, TNF, and IFN-γ are associated with the severity and mortality of meningococcal sepsis [155]. N. meningitidis adopts a nitric oxide detoxification mechanism to inhibit macrophage apoptosis, and the prolonged survival of macrophages might be associated with a high level of inflammatory response and harm to the host [156]. Some host factors expressed on macrophages, including mannose-binding lectin (MBL) [157]and the scavenger 15 receptor SR-A [158], are reported to be host-protective during meningococcal septicemia, whereas human CD46 contributes to the susceptibility to meningococcal infection (Paper III). Although meningococci have a well-known capacity to induce the Th1-type proinflammatory response [128,137,159], there is some evidence of negative immune cell regulation by this bacterium. For example, CD200, an immune inhibitory ligand expressed on macrophages, can be induced via the TLR and NLR pathways upon meningococcal infection, thereby restricting macrophage activation and protecting the host from septicemia [160]. Nevertheless, how meningococci asymptomatically colonize the nasopharynx and limit activation of the host inflammatory response remains largely unknown. Toward addressing this lack, in Paper II, we demonstrated that the meningococcal adhesion NhhA programs a type of immune homeostatic macrophage, which potentiates meningococcal nasopharyngeal carriage. 16 Chapter 4 Mycobacteria 4.1 Carriage and disease Tuberculosis (TB) is a bacterial infection caused by Mycobacterium tuberculosis that affects 9.6 million people and leads to 1.5 million casualties annually, with most cases found in developing countries [161]. According to a WHO estimation, 28% of the world’s TB cases occur in Africa, and the three largest TB epidemics are in India, Indonesia, and China [161]. HIV infection, diabetes, malnutrition, and smoking are the leading risk factors for increased individual susceptibility to TB [162]. About one-third of the global population has been infected due to the highly contagious feature of M. tuberculosis, but most people manage to mount a sufficient immune response to eradicate the bacteria or keep the infection in an asymptomatic state (also called latent TB infection, LTBI) [163]. Around 10% of exposed individuals will develop clinical disease during their lifetimes [162]. TB infection begins with the inhalation of the aerosol droplets containing virulent mycobacteria [164]. Once the bacteria enter the lungs, they primarily infect resident alveolar macrophages, confront the hostile environment within the macrophages, and attempt to use them as survival niches. After successful replication in the macrophages, M. tuberculosis can trigger the host cell death to escape and infect newly recruited cells [164]. In addition, infected DCs migrate to the peripheral lymph nodes to activate the T lymphocyte response but simultaneously abet bacterial dissemination [165]. M. tuberculosis most commonly infects the lungs and leads to clinical symptoms such as night sweats, bloody coughs, and weight loss [162]. The bacteria can also spread into extrapulmonary organs through hematogenous transmission and cause other diseases including pericarditis, meningitis, or spinal TB, especially in immunosuppressed patients and young children [166]. M. bovis Bacillus Calmette–Guérin (BCG) is a live attenuated mycobacterial organism that has been use as a TB vaccine worldwide since 1921 [167]. The effectiveness of the BCG vaccine varies from no protection to 70–80% protection, with higher efficacy in children and lower efficacy in adults [168]. Fortunately, TB is curable by using anti-TB drugs including isoniazid, rifampicin, ethambutol, and pyrazinamide with a success rate of 85% or more [161,169]. However, multidrug resistance has become an increasing obstacle to progress in global TB control [169]. Therefore, TB remains a threatening infectious disease with the highest mortality worldwide despite the use of live attenuated vaccine and antibiotics. A fundamental understanding of TB pathogenesis and host-mycobacteria interaction is essential for developing more efficient vaccines and anti-TB agents. 17 4.2 Mycobacteria M. tuberculosis, the main etiological agent of TB, is an ancient enemy of humans first discovered in 1882 by Robert Koch [170]. The bacterium is an aerobic, non-motile, slow-growing (divide every 15–20 h) bacillus [60]. Mycobacteria have a thick cell wall with a high lipid content, conferring the bacteria many unique clinical characteristics [171]. Mycolic acids are the major and specific lipid components of the mycobacterial outer membrane and key virulence factors crucial for survival and pathogenesis of M. tuberculosis [171]. The low impermeability of the mycobacterial cell wall, mainly attributed to mycolic acids, provides the bacteria resistance to most chemotherapeutic agents and hydrophobic antibiotics [172]. The presence of mycolic acids also distances the bacteria from the acid produced by the host’s immune system and enables survival within macrophages [172]. Due to the unique cell wall structure, M. tuberculosis is impervious to the crystal violet of Gram staining. Instead, the Ziehl-Neelsen stain for detecting acid-fast bacillus is used for histological examination of mycobacteria because the waxy, complex cell wall avoids the decolorization by acids during staining procedures [173]. Figure 2. GFP-M.bovis BCG internalized by murine macrophages. M. tuberculosis is genetically diverse, and variations in strain phenotypes are associated with clinical isolates from different geographic regions. TB outbreaks are often induced by hypervirulent strains such as Beijing strains [174]. In the laboratory, a virulent strain H37Rv and an avirulent strain H37Ra are commonly used as model strains to investigate the pathogenesis of TB [175]. Although M. tuberculosis is the primary culprit of TB infection in human, there exist other TB-causing mycobacteria such as M. bovis, M. africanum, M. canetti, and M. microti [176]. The latter three species are rare and mainly found in Africa [176]. M. bovis is a causative agent of bovine TB but can cross the species barrier to infect humans and other mammals [177]. The well-known M. bovis strain BCG is not only adopted globally as a TB vaccine but also widely used as a model system mimicking attenuated M. 18 tuberculosis strains since BCG and M. tuberculosis share 99.9% genetic identity [178,179] (Figure 2). Extensive laboratory TB studies have been performed by intranasal administration of M. bovis BCG in mice models. The attenuated virulence of M. bovis BCG strains is attributed to the lack of an RD-1 region, which is found in all virulent M. tuberculosis and M. bovis strains [180]. The Rv3875 gene encoding the 6-kDa early secretory antigenic target (ESAT-6) within the RD-1 locus is thought to associate with bacterial virulence [181]. In addition, RD-1-deficient mycobacteria fail to trigger rapid and continuous migration of macrophages, which results in less expansion of the bacterial infection [182]. In some rare conditions such as Mendelian susceptibility to mycobacterial disease (MSMD), the immunosuppressed patients can still be predisposed to the disease caused by BCG infection [183]. Besides those human-pathogenic strains, M. marinum, a natural pathogen of ectotherms, can promote a systemic TB-like disease in zebrafish, which have also been developed as a TB model system, especially for granuloma studies [184]. However, any extrapolation of data obtained from the non-human mycobacterial strains and animal models should include extra caution because of the lack of human-specific immune factors and the absence of M. tuberculosis-specific virulence factors such as the ESX-1 region and PhoP/PhoR system [185]. 4.3 Mycobacteria and macrophage interaction 4.3.1 Bacterial recognition and internalization Macrophages are the first line of human host defense against M. tuberculosis invasion in the lungs and the primary targets for M. tuberculosis replication niches [186]. As an intracellular pathogen, M. tuberculosis recognition by various receptors on macrophages leads to its internalization and initiation of the infection process. The mannose receptors (CD206) expressed on macrophages bind to mannosylated motifs of virulent mycobacteria, which promotes the phagocytosis of bacilli without activating the proinflammatory response [187,188]. M. tuberculosis can also activate the complement system and be opsonized by C3b and C3bi, which bind to the complement receptor CR1, CR3, or CR4 [188,189]. FcγR is presented on macrophages and binds to IgG-opsonized M. tuberculosis, resulting in uptake of mycobacteria and production of ROS and proinflammatory cytokines [190]. FcγRmediated phagocytosis is also associated with enhanced phagolysosomal fusion, which might benefit the host during M. tuberculosis infection [191]. Furthermore, many other receptors are involved in the interaction between M. tuberculosis and macrophages, such as CD14, scavenger receptors, DCSIGN, mannose-binding lectin, and dectin-1 [192]. 19 Apart from those endocytosis-related PRRs, TLRs play an important role in M. tuberculosis infection by triggering the intracellular signaling pathways and initiating cytokine production, which are essential for modulating the macrophage bactericidal capacity and linking innate immunity to adaptive immunity. TLR2-deficient mice fail to form granulomas, and both TLR2and TLR4-defective mice show higher susceptibility to mycobacterial infection than WT mice [193,194]. A range of extracellular mycobacterial TLR ligands have been identified, such as lipomannan and lipoarabinomannan (TLR2 ligands) [192,195]; diacylated lipoprotein (TLR1/2 complex ligand) [196]; triacylated lipoprotein (TLR2/6 heterodimers ligand) [197]; and tetraacylated lipomannan, Hsp65, and 50S ribosomal protein (TLR4 ligands) [192,198]. Furthermore, mycobacterial DNAs containing CpG motifs are recognized by intracellular receptor TLR9, leading to the production of proinflammatory cytokines such as IL-12p40 and IFN-γ [199]. The interaction between M. tuberculosis and cytosolic NOD2 receptor is also associated with the secretion of cytokines against M. tuberculosis infection [200,201]. 4.3.2 Intracellular survival of M. tuberculosis in macrophages Macrophage phagosome maturation through fusing with lysosomes, resulting in an environment containing lysosomal enzymes, reactive oxygen intermediates, toxic peptides and acid PH, which is detrimental for bacterial growth [202]. The vacuolar H+/ATPase in the phagosomal membrane is responsible for achieving acidification through hydrolysation of ATP and translocating H+ across the membrane [203]. IFN-γ can activated macrophages and enhance phagosomal maturation, along with increased reactive nitrogen intermediates (RNI) production, which improves bactericidal activity especially in murine macrophage models [204]. The ESAT-6 of M. tuberculosis triggers NADPH oxidase-mediated ROS generation, which is an agent assisting in the control of bacterial growth [205]. However, M. tuberculosis has developed specific strategies that inhibit the maturation of phagolysosomes to contend with the macrophage defense. This process can be achieved by preventing the fusion of late endosomes and lysosomes, repressing the recruitment of vacuolar H+/ATPase to raise the PH, or detaining the early endosome markers and coronin-1 [206]. For instance, the mannose-capped lipoarabinomannan (ManLAM) of M. tuberculosis, which is a mannose receptor ligand, is thought to be a major player in blocking the fusion of phagosomes and lysosomes [187]. Cholesterol, an essential factor for the uptake of M. tuberculosis through the complement receptor, is also involved in the inhibition of phagosomal maturation [207]. In addition to blocking phagosome maturation, M. tuberculosis employs other strategies for its survival. To counteract bactericidal agents, catalase-peroxidase KatG and the mel2 locus of mycobacteria confer their resistance to ROS [208], and M. bovis BCG can prevent iNOS recruitment to macrophage phagosomes [209]. Furthermore, M. bovis BCG or mycobacterial lipoprotein can block 20 the expression of MHC II induced by IFN-γ on macrophages, thus preventing antigen presentation to trigger type I T cell immunity [210]. Autophagy is a relatively newly identified host defense mechanism for controlling the intracellular survival of mycobacteria [211,212]. Type III PI3K hVPS34 and PI3P are essential factors for both phagolysosome formation [213] and the autophagy pathway [211]. Induction of autophagy by IFN-γ promotes maturation of mycobacterial phagosomes in a PI3K-dependent manner, thus inhibiting the bacterial survival within macrophages [211]. These initial findings in 2004 were confirmed by several subsequent studies in different contexts. Downregulation of the long noncoding RNA (lncRNA) MEG3 by IFN-γ can enhance autophagy and bacterial eradication by regulating the mTOR and PI3K-Akt signaling pathway [214]. Induction of autophagy also promotes the delivery of ubiquitin-derived bactericidal peptides to the lysosome and enhances the killing capacity [215]. Furthermore, the mycobacterial lipoprotein LpqH has been shown to activate vitamin D3 and cathelicidin-dependent anti-mycobacterial autophagy via TLR2/1/CD14 [216]. ATP-mediated elimination of intracellular mycobacteria is also associated with activation of autophagy [217]. In contrast, Th2 cytokines including IL-4 and IL-13 abrogate autophagy-mediated killing of intracellular mycobacteria in macrophages via Akt signaling [218]. Nevertheless, M. tuberculosis remains a highly successful pathogen that is hardly eradicated but merely controlled [219]. To improve the prevention and treatment of TB, further investigations are needed to fully decipher the mechanisms of mycobacterial survival especially in human macrophages, which are more susceptible than murine macrophage models. 4.3.3 Cell death of macrophages during M. tuberculosis infection Once M. tuberculosis succeeds in intracellular replication, the bacteria escape from the macrophages and induce disseminated infection by triggering host cell death [220]. Thus, the fate of macrophages during mycobacterial infection is critical for pathogenesis of TB. Upon M. tuberculosis infection, the major outcomes of macrophages are apoptotic cell death, necrotic cell death, and survival[220]. Necrosis is characterized by plasma membrane disruption, which fails to control mycobacterial replication and dissemination [221]. Apoptosis is associated with preserved plasma membrane integrity and efficient bactericidal capacity and is thus considered a host defense mechanism [221]. The different cell death modes are challenging to distinguish because of the many factors involved including the heterogeneity of bacterial virulence and macrophages, variation in the number of internalized bacteria, and asynchronous infection [220]. Generally, virulent M. tuberculosis strains such as H37Rv prefer to induce necrotic cell death in macrophages by inhibiting apoptosis to enhance their contagiousness [222]. Attenuated strains including M. bovis BCG and M. tuberculosis H37Ra predomi21 nantly trigger apoptosis [221]. However, when macrophages are infected with attenuated mycobacteria at high MOI, initial apoptotic cell fate can turn into necrosis accompanied by bacterial spread [223]. Apoptosis triggered by mycobacteria can be achieved through extrinsic and intrinsic pathways. The extrinsic pathway can be induced by TNF as a death receptor ligand in an autocrine or paracrine manner, followed by assembly of the death-inducing signaling complex (DISC) and caspase-8 activation [221]. The intrinsic apoptotic pathway is functionally associated with mitochondrial outer membrane permeabilization (MOMP) governed by a series of Bcl-2 family proteins [220]. Upon M. tuberculosis infection, the antiapoptotic Bcl-2 protein is inhibited, and the pro-apoptotic proteins Bax and Bak are activated by the effect of Bcl-2-homology 3 (BH3) proteins. Activated Bax and Bak oligomerize and form a channel through the mitochondrial membrane, which allows the release of apoptogenic proteins including cytochrome c, SMAC/Diablo, and HtrA2/Omi into the cytosolic compartment [224]. Cytochrome c and apoptosis protease activating factor-1 (Apaf1) form the apoptosome complex and trigger the activation of caspase-9. Downstream, activation of both caspase-8 and caspase-9 leads to activation of the executioner caspase-3, which directly triggers apoptotic cell death [220]. Notably, the intrinsic pathway can be amplified by activation of the extrinsic pathway, as the activated caspase-8 leads to BID cleavage and BAX activation and further results in the release of cytochrome c and caspase-9 activation [221]. Furthermore, caspase-independent apoptosis induced by mycobacteria has been observed; for example, macrophages infected with M. tuberculosis at high MOI may undergo apoptosis via a cathepsinmediated lysosomal pathway [223]. The pathways of M. tuberculosis-induced necrosis are heterogeneous and relatively less well understood. For instance, two forms of necrotic death, pyroptosis and necroptosis, occur via caspase-1 and RIP1-RIP3, respectively [220]. Excess TNF can induce mitochondrial ROS in mycobacteria-infected macrophages via the RIP1-RIP3 kinase pathway, leading to necroptosis without controlling the dissemination of mycobacteria [59]. Apart from apoptosis and necrosis, infected macrophages can also undergo autophagic cell death in cases when engulfment by the autophagosomes is excessive [55]. This type of cell death is thought to be beneficial for the host, since it can efficiently control bacterial replication through enhanced bactericidal capacity and remove the bacterial survival niche in a quiescent manner [55]. In addition, autophagy inhibits apoptosis by suppressing Bid activation by Bectin 1 and degrading activated caspase-8 [225]. In summary, the different cellular fates of macrophages during mycobacterial infection can strongly influence the outcome of TB disease. A deeper un22 derstanding of how mycobacteria regulate macrophage cell death could improve approaches to therapeutic interventions for TB and vaccine efficacy. 4.3.4 Granuloma formation Tuberculosis is characterized by the organized formation of immune cell aggregates called granulomas [226]. The structure is initiated by the focal accumulation of activated macrophages, which often undergo further changes including transformation to epithelioid form, fusion into multinucleated giant cells (MGCs), differentiation into lipid-rich foam macrophages, or formation of a caseum region due to necrosis [227]. The macrophage aggregates can further recruit other immune cells including DCs, neutrophils, NK cells, T cells, B cells, and fibroblasts to form an organized complex [61]. In particular, MGCs formed by fused monocytes or macrophages are the characteristic feature of granulomas [228]. The functional phenotypes of MGCs triggered by mycobacteria can vary depending on the bacterial virulence. Generally, low-virulence species such as M. avium and M. smegmatis tend to induce small MGCs with low numbers of nuclei per cell and retained phagocytic activity; in contrast, highly virulent M. tuberculosis promotes formation of large MGCs with impaired phagocytosis but strong antigen presentation capability [229]. Macrophage fusion can be triggered by several mediators including IL-4 [230], IFN-γ [231], GM-CSF [232], and CCL-2 [233]. The macrophage fusion receptor (MFR)-CD47 interactions [234] and CD44 [235] are proposed to play central roles in cell-cell recognition during MGC formation. Granulomas can persist in the host for years and have been historically recognized as a protective structure for the host. They are thought to be important for maintaining latent TB infection by “walling off” the persisting mycobacteria and protecting the neighboring tissue from infection [236]. The core of a matured granuloma is hypoxic, which restricts the replication of M. tuberculosis and keeps them in a dormant bacillary state [60]. Indeed, there are mouse studies showing that defective granuloma formation is associated with decreased survival during chronic M. tuberculosis infection [61]. Furthermore, many asymptomatic carriers of M. tuberculosis have evidence of healed granulomas. However, some immunocompetent TB patients have well-formed granulomas but fail to control infection, indicating whether granuloma is protective largely depends on the context, such as the type and activation states of cells in the structure [237]. Recently, dynamic imaging studies of M. marinum-infected zebrafish embryos indicated that early granuloma formation might promote mycobacterial dissemination and benefit the bacteria [182,236]. The granuloma-forming macrophages can move rapidly and continuously recruit new cells that become infected again by uptaking the dying infected cells [182]. These results provided a novel and more sophisticated view of the role of granulomas in TB pathogenesis, which could 23 have important therapeutic implications [236]. However, animal models are never perfect since they lack human-specific immune factors that might play important roles in the outcome the TB infection. For instance, human CD46 expression is protective for mice against M. bovis BCG infection, which is associated with enhanced granuloma formation (Paper IV). Modulating the pathways that benefit the host could lead to a new attractive approach to combat TB, but more comprehensive studies of granulomas are needed to provide essential information. 24 AIMS OF THE STUDY The overall aims of the present study were to investigate the functional modulation of macrophages upon infection with pathogenic bacteria including Neisseria meningitidis and Mycobacteria bovis BCG and to understand the role of macrophages in the pathogenesis of those infectious diseases. Specific aims 25 • To investigate the effects of the meningococcal surface protein NhhA on macrophage activation and the underlying signaling pathways. (Paper I) • To examine the role of NhhA in macrophage polarization and its impact on the asymptomatic nasopharyngeal carriage of N. meningitidis. (Paper II) • To understand how the human transmembrane protein CD46 regulates macrophage function and sepsis reaction during meningococcal or other gram-negative infection. (Paper III) • To characterize the effect of human CD46 on modulating macrophage polarization and cell death and host susceptibility to mycobacterial infection. (Paper IV) RESULTS AND DISCUSSION Paper I Besides the major proinflammatory factor LOS, various meningococcal surface molecules such as PorB [152] and NadA [159] can serve as virulence factors and induce proinflammatory innate immune responses, which are essential for the innate host defense. Here we demonstrated that the purified recombinant meningococcal outer membrane protein NhhA can provoke IL6 and TNF production in RAW 264.7 mouse macrophages in a time- and dose-dependent manner. Using PCR-array screening followed by qPCR validation, we found that NhhA strongly stimulated the transcriptional upregulation of a number of proinflammatory mediators in RAW 264.7 macrophages. Among these cytokines, IL-1α, IL-1β, IL-6, G-CSF, and GM-CSF were upregulated over 10,000-fold, whereas TNF was upregulated about 11-fold in response to NhhA stimulation. The NhhA-dependent induction of these six cytokines was corroborated in human THP-1 macrophages and human primary monocyte-derived macrophages, although the human cells appear to be less susceptible to NhhA stimulation than the murine macrophage cell line. The signaling mechanisms involved in NhhA-induced cytokine release were investigated using a set of pharmacological inhibitors and siRNA silencing. NhhA-provoked IL-6 and TNF release were both associated with NF-κB activation. However, IL-6 secretion was TLR4-MyD88-dependent, whereas TNF production was TLR4- and MyD88-independent in murine RAW 264.7 macrophages. None of TLR1, TLR2, or CD14 was involved in NhhAtriggered production of IL-6 and TNF. Furthermore, in human monocytederived macrophages, NhhA promoted upregulation of G-CSF and IL-6 mRNA in a TLR4-dependent manner, whereas GM-CSF and TNF mRNA were elevated via TLR4-independent pathways. The capacity of NhhA to activate TLR4 signaling was further confirmed in the transfected HEK293 cells expressing TLR4. We found that NhhA significantly induced TNF mRNA but not IL-6 mRNA. Together, these results suggest that NhhA simulates inflammatory responses in macrophages through both TLR4-dependent and -independent pathways and that the involved signaling pathways can vary by cell line or species. These data provided evidence that the meningococcal outer membrane protein NhhA has immunostimulatory capacity by triggering production of cytokines in macrophages, which could contribute to a regulatory inflammatory milieu at the infection site. This knowledge can be integrated into developing potential complementary approaches to alleviate inflammatory reactions in meningococcal sepsis. Furthermore, NhhA has been suggested as a 26 vaccine or adjuvant candidate based on its ability to trigger anti-bactericidal antibodies [238,239], so better understanding of the immunomodulation function of NhhA is important for successful development of potential protein-based vaccines. Paper II In Paper I, we demonstrated that NhhA provokes inflammatory cytokine production in macrophages. In the subsequent study, we observed that NhhA could also trigger substantial production of inflammatory mediators in human peripheral monocytes. Prolonged NhhA treatment induced monocyte differentiation into CD14+CD1a- macrophages (NhhA-MØ) instead of DCs in a time- and dose-dependent manner, with the optimal effect observed when monocytes were challenged with 50 nM NhhA for 3 days. NhhA containing the full passenger domain rather than the truncated NhhA protein is required to efficiently trigger monocyte differentiation. We investigated the signaling pathways underlying NhhA-provoked cell differentiation. By using a series of specific inhibitory antibodies against TLRs, we found that NhhA initiated monocyte activation through the TLR1/TLR2 signaling pathways. Western blotting analysis revealed that NhhA-triggered TLR1/2 activation on monocytes selectively led to MAP kinase activation by the phosphorylation of ERK and JNK. In addition, NFκB was involved in the downstream signaling activation rather than AP-1. A broad range of inflammatory mediators induced by the TLR1/2-NF-κB pathways could be involved in promoting macrophage differentiation. Using qPCR analysis and block assay, we found that NhhA induced the mRNA production of IL-6, IL-12b, IL-10, and TNF in a TLR1/2-NF-κB-dependent manner. To identify which cytokines were genuinely involved in the formation of NhhA-MØ, we took advantage of neutralizing antibodies or inhibitors against the selected cytokines. Endogenously produced IL-10 and TNF were shown to participate in the action. In summary, NhhA programmed monocyte differentiation through TLR1/TLR2-activated ERK/JNK MAP kinases and NF-κB signaling pathways in an IL-10/TNF-dependent manner. Subsequently, we attempted to characterize the phenotype of NhhA-MØ by checking the surface marker expression, analyzing the cytokine profile, and examining their bactericidal capacity. Surprisingly, NhhA-MØ displayed a CD200Rhi CD206+ phenotype with low surface expression of M1-associated HLA-DR, CD86, CD80, and TLR4. Consistent with the anti-inflammatory features, NhhA-MØ was hyporesponsive to meningococcal infection, with reduced induction of proinflammatory cytokines (IL-6, TNF, IL-12, IL-23, and IL-1β) but enhanced levels of Treg or Th2 chemokines (CCL17, CCL18, 27 and CCL-22). In addition, NhhA-MØ could uptake and kill bacteria as efficiently as M1-like macrophages. Hence, NhhA promoted macrophage polarization into a specific immunotolerant and bactericidal phenotype rather than the classical M1 or M2. Figure 3. Schematic diagram illustrating the potential effects of NhhA-MØ on asymptomatic nasopharyngeal carriage of N. meningitidis. NhhA-MØ is predicted to (1) prevent of bacterial dissemination by uptaking and eliminating invaded bacteria and (2) exhibit hyporesponsiveness to meningococcal stimulation via generation of reduced amounts of inflammatory mediators but increased amounts of antiinflammatory factors. This homeostatic microenvironment might also alleviate tissue damage and potentiate meningococcal persistence at the nasopharyngeal mucosa. By using CD46+/+ transgenic mice, a conventional model of meningococcal infection, the role of NhhA in reprogramming macrophages and its effect on host-bacteria interaction during N. meningitidis infection was investigated in vivo. We pretreated the mice intraperitoneally (i.p.) with NhhA for 3 days followed by i.p. challenge with FAM20 (a serogroup C meningococcal strain). A rapid influx of immune cells predominantly contributed by the F4/80hiCD11bhi infiltrating macrophages was observed in the peritoneal cavity of NhhA-treated mice but not in the heat-inactivated NhhA-treated control mice. Accordingly, peritoneal macrophages isolated from the NhhA-treated mice displayed anti-inflammatory phenotypes with enhanced CD206 and Arg1 production, attenuated proinflammatory reaction in response to meningococcal stimulation, and increased killing capacity. The intrinsic effect of NhhA on macrophage programming in vivo was further shown using NhhAdeficient meningococci (ΔNhhA). As expected, CD46+/+ mice i.p. infected with ΔNhhA produced fewer inflammatory macrophages in their peritoneal cavity than those infected with WT meningococci, and the ΔNhhA-polarized 28 macrophages produced elevated IL-12 but diminished IL-10 and iNOS. Attributed to the specific functional phenotypes of NhhA-MØ, mice pretreated with NhhA efficiently controlled bacterial dissemination and survived meningococcal infection, providing strong support for the role of NhhA in macrophage programming in vivo. The mechanism by which meningococci asymptomatically colonize nasopharyngeal mucosa in healthy individuals remains a long-standing mystery. We hypothesized that the anti-inflammatory and bactericidal NhhA-MØ might modulate the nasal microenvironment and favor commensal bacterial colonization. The notion was supported in an intranasal infection model. We observed that intranasal NhhA pretreatment in mice downregulated mucosal immune activation, which was associated with enhanced bacterial colonization in the nasopharynx. A schematic diagram summarizing the role of NhhA in nasopharyngeal carriage of meningococci is shown in Figure 3. Thus, fine-tuning monocyte activation might be a strategy exploited by N. meningitidis to trigger immune ignorance and maintain commensal colonization. Paper III Transgenic mice expressing human CD46 (CD46+/+ mice) have been used as a model system to investigate the pathogenesis of several human-specific pathogens including N. meningitidis [67,68,102] . CD46+/+ mice were found to be more susceptible to meningococcal systemic infection and exhibited enhanced proinflammatory response and higher mortality than the WT mice [67,106]. The increased susceptibility of CD46+/+ mice to all other pathogens such as group A streptococcus and MV was apparently correlated to the function of CD46 as a receptor, whereas the role of CD46 in meningococcal adhesion is debated [75,240]. Thus, the underlying mechanism by which CD46 contributes to the severity of meningococcal sepsis remains largely unknown. Our results broadened the understanding of the disposition of CD46+/+ mice to bacterial sepsis, suggesting that it is not restricted to the infection of meningococci or other pathogens as CD46 ligands but might be generally applicable to gram-negative sepsis. A non-lethal dose of LPS for WT mice (20 mg/kg, i.p. injection) caused an intensive inflammatory response and increased mortality in the CD46+/+ mice. We found that the susceptibility of CD46+/+ mice was largely attributed to the greater amounts of M1-like macrophages in their peritoneal cavity than that for WT mice. CD46 signaling improved monocyte-derived macrophage differentiation triggered by M-CSF or GM-CSF. Moreover, in the presence of CD46, macrophages expressed elevated levels of CCL2, a chemokine associated with the recruitment of 29 monocytes, which might also contribute to the increased number of peritoneal macrophages in the CD46+/+ mice. Functionally, CD46+/+ macrophages displayed enhanced production of pro-inflammatory cytokines including IL6, TNF, IL-12, and IL-1b compared with the WT macrophages in response to LPS challenge or meningococcal infection both in vitro and in vivo. These cytokines are all clinically correlated to the severity of bacterial sepsis. CD46+/+ macrophages also showed enhanced bactericidal capacity relative to WT macrophages but underwent rapid apoptosis during LPS or meningococcal infection, which might lead to the uncontrolled bacterial dissemination in vivo. Consistently, adoptive transfer of CD46+/+ macrophages into the peritoneal cavity of WT mice augmented the production of pro-inflammatory mediators and increased mortality in WT mice during the infection of N. meningitidis. Conversely, depletion of macrophages partially attenuated the septic responses in the CD46+/+ mice upon meningococcal infection. These results further indicated the role of CD46 in affecting the outcome of bacterial sepsis in a macrophage-dependent manner. In conclusion, our study first proposed that human CD46 signaling is involved in modulating the development, polarization, and cell death of macrophages, which could greatly influence the resolution of septic shock. In addition, these findings increased knowledge about the CD46+/+ transgenic mouse as an animal disease model. Understanding the role of host factors such as CD46 has great implications in the search for new therapeutic targets to combat the life-threatening bacterial sepsis. Paper IV Our results presented in Paper III showed that CD46 participated in the modulation of macrophage polarization and apoptosis upon acute gramnegative infection. Therefore, we aimed to determine how CD46 performs immunoregulation during chronic infectious diseases such as TB. CD46+/+ transgenic mice intranasally challenged with M. bovis BCG displayed reduced bacterial dissemination, less influx of immune cells, and better granuloma formation than the WT mice, indicating a potential protective role of CD46 in mycobacterial infection. Macrophages are the first line of immune defense against M. tuberculosis in the lung but can also be exploited by the bacteria as a survival niche; hence, macrophages play critical roles in the pathogenesis of TB [241]. We isolated macrophages from both CD46+/+ and WT mice and compared their functional phenotypes in response to BCG infection ex vivo. The expression of human CD46 on macrophages significantly strengthened their capacity to control the intracellular growth of BCG, which was attributed to the higher production of RNI and enhanced autophagy. The engagement of CD46 also 30 inhibited the mycobacteria-triggered cell death of macrophages. We found that inhibition of apoptotic cell death occurred via both the extrinsic and intrinsic pathways. TNF, as a stimulus of the extrinsic pathway, was produced at a lower level in CD46+/+ macrophages relative to WT macrophages upon BCG infection. In the intrinsic pathway, CD46+/+ macrophages expressed decreased levels of pro-apoptotic factors such as Bad and Bid but higher levels of anti-apoptotic factors including Bcl-2 and Bcl-xL. Dampened caspase-3/7 activities in response to BCG challenge were detected in CD46+/+ macrophages compared to the WT macrophages, which could be involved in both extrinsic and intrinsic pathways. Additional anti-apoptotic factors such as IL-6 and CCL-2, which inhibit apoptosis through upregulation of Bcl-2 and Bcl-xL [242], were expressed at higher levels in BCGinfected CD46+/+ macrophages, supporting our observations above. The prolonged lifespan and enhanced bactericidal capacity of CD46+/+ macrophages might be associated with reduced bacterial dissemination detected in the lungs. Granuloma formation is a hallmark of TB, and the formation of MGCs is the characteristic feature of granulomas [236]. Consistent with the enhanced granuloma formation in the lungs of CD46+/+ mice, we observed that CD46+/+ macrophages had a higher fusion capacity to form MGCs in response to BCG challenge in vitro. Consistently, the fusion factors including CCL2, IFN-γ, and IL-4 were produced at higher levels in CD46+/+ macrophages upon BCG infection. Whether the granulomas play a host-protective role in TB diseases remains controversial [237]. Most studies have used preclinical animal models such as mice and zebrafish, which do not express human-specific immune factors. Our study demonstrated that in the presence of human CD46, the formation of granulomas upon BCG infection was associated with controlled mycobacterial burden. In addition, we first showed that BCG downregulates the surface expression of CD46, which could be exploited by the mycobacteria as a survival strategy. Thus, we revealed that human CD46 expression in mice played a host protective role against BCG infection, which provides important implications for the development of more effective vaccines and drugs against TB. 31 FUTURE PERSPECTIVE The common situation in scientific research is “old problem, new findings, yet more questions.” Herein, we addressed some of the questions raised during this thesis work, which could be interesting to explore in future studies. In Paper I and Paper II, we revealed a dual role of NhhA as a virulence factor triggering intensive pro-inflammatory responses and as an immune regulator maintaining the homeostatic environment during the bacterial carriage state. The distinct functions of NhhA might depend on the different activation stages of monocyte/macrophage linages. NhhA activates monocytes through TLR1/2 and macrophages via TLR4-dependent/-independent signaling pathways, respectively, indicating the complexity of the surface receptors involved in NhhA-induced signaling. In Paper II, NhhA-activated Akt/PI3K in monocytes was found to be TLR1/2-independent, suggesting that identification of additional receptors for NhhA is required for a complete understanding of related mechanisms. NhhA is considered as a vaccine candidate against N. meningitidis infection [238,239]. However, certain sequence variations of NhhA exist among species [243]. Further studies for both Paper I and Paper II are essential to investigate whether the role of NhhA is strain-specific. In addition, how the innate immunomodulation by NhhA is functionally linked to adaptive immunity remains unexplored but important for providing a foundation for new vaccine development. The mechanisms by which meningococci asymptomatically colonize the nasal mucosa are largely unknown. We revealed that NhhA-modulated macrophages potentiate the immune homeostatic environment for commensal carriage (Paper II). Cytokine patterns are critical to maintain the balanced environment. In particular, IL-10 is beneficial for the colonization of several bacteria including group B Streptococcus [244], Staphylococcus aureus [245], and Bordetella bronchiseptica [246]. Elucidation of the role of IL-10 or other cytokines in meningococcal colonization would be worthwhile in subsequent studies. By using the CD46+/+ transgenic mice model, we unraveled the distinct roles of CD46 in acute meningococcal and chronic mycobacterial infection in Paper III and Paper IV. CD46 engagement leads to increased apoptosis of macrophages upon LPS or meningococci-infection but increased macrophage viability in response to BCG infection. In addition, meningococci trigger elevated TNF secretion, whereas BCG induces lower levels of TNF production in CD46+/+ macrophages than in WT macrophages. This func32 tional discrepancy might arise from the high heterogeneity of CD46 structure, which leads to distinct signaling pathways [247]. The two cytoplasmic tails, CYT-1 and CYT-2, are associated with promoting and decreasing inflammatory reactions in T cells, respectively [63]. The availability of transgenic mice specifically expressing CYT-1 and CYT-2 could enable a deeper understanding of CD46 signaling in innate immune regulation. The function of CD46 also appears to be tightly regulating by its crosslinking with other host receptors such as TLRs, which is worth investigations in future studies. Furthermore, how the CD46-modulated macrophages interact with T cell immunity during sepsis or TB will be interesting to explore. A series of pathogens have been shown to downregulate CD46 expression on host cells [68,82,83]. We reported for the first time that CD46 surface expression could be downregulated by the mycobacterial BCG in Paper IV, although whether the process is mediated by internalization or shedding remains unknown. Further investigations are necessary to determine the underlying mechanism of BCG-triggered CD46 downregulation and its role in the pathogenesis of TB. Whether granuloma formation in TB benefits the host or bacteria is debated [248]. Conclusions from work in animal models are complicated by the absence of human-specific factors. By introducing the human host factor CD46, we provided new evidence that granulomas might be protective against BCG infection in Paper IV. However, the avirulent mycobacterial strain used in our study lacks RD-1, a critical factor for the motility of macrophages that contributes to infectivity [182]. Further studies employing CD46+/+ virulent mycobacterial strains are required. Meanwhile, it is important to test these results in human systems and examine potentially supporting clinical evidence. 33 ACKNOWLEDGEMENTS This work was carried out during the years 2012-2016 at the former Department of Genetics, Microbiology and Toxicology and the present Department of Molecular Biosciences, the Wenner-Gren Institiute, Stockholm University. I owe my deepest gratitude to my supervisor Hong for all the patience and effort she has paid, for her guidance and support during every step of my study and for her continued kind help with my future career. I would like to acknowledge my previous supervisors Prof. Göran Akusjävi (Master’s project) and Prof. Hongjun Li (Bachelor’s project) for bringing me into the science world. Many thanks to my co-supervisor Prof. Ann-Beth Jonsson for always being considerate and supportive to me. I am also grateful to Sushil for all the valued suggestions and always being nice. Thank Helena and Klas for being kind and helpful. Thank Prof. Ulrich Theopold, Maria Lerm and Andor Pivarcsi for joining my Licentiate committee and providing profound comments on my projects. My sincere thanks also go to our co-authors and collaborators. Mikael, for all the insightful opinions and helping me with the Swedish summary. Yumin, for helping me perform the NhhA experiments and being a good companion during the first year. Ding, it is so nice to have your assistance in the animal room. Marco, for being positive and helpful and brightening up my days, although you always put the cell culture stuff on the top shelf. Thank Prof. Carmen Fernández, for kindly providing me the powerful BCG strain and useful suggestions, which was a great help to my last project. Dagbjört, for generously sharing the recipes, protocols and experiences in mycobacterial and animal work. I feel fortunate to work in such a friendly and supportive atmosphere of MBW department, especially of our F5 corridor. Great thanks to my current and former colleagues in ABJ-group, Helena-group, Sushil-group and later-joined Klas-group. I really enjoyed the Monday meetings with you. Nele, you were the one who kindly opened the door for me when I first entered the department and then witnessed and accompanied in my whole PhD life. Raquel, thanks so much for being such a caring and perceptive friend. Sunil, your positive attitude and laugh are super contagious. Sara.E, thanks for being a nice companion on many late-working days in the office. Miriam, your rigorous attitudes to science inspired me a lot. Lisa, thanks for encouraging me to investigate more on CD46 mice, which now became my Paper III. Cecilia, also a nice companion in the old office, thanks for guiding me the right way to use knife and fork. Sara.S, it was a pleasure teaching together with you and also thanks for helping me with the microscope. Han34 na, for being nice and introducing the Ethiopian culture to us. Gabriela, for being kind and for the interesting stories about Holland and middle-east. Jakob, for the pleasant talk during Fika time and some dinners. Pilar, I am grateful for the thoughtful discussions on macrophages. Linda, thanks for encouraging me to be stronger. Niklas, it is so nice to have someone exchanging birthday greetings every winter and thanks for all the novel stories and ideas you have brought to me. Katarina, thanks for being positive, funny and wise. Mattias, it was great to teach together with you and with your tasty cakes. Fredrik, you are also a good teaching companion and nice colleague. Mano, thanks for being funny during the dinners and friendly all the time. To my office colleagues during my third and last year, Gabor, Spycros, Eva, Ymke, Espranza and Shad, thank you so much for your companionship. Also, thanks Lucille for generously sharing your experience in BCG and mice work. Yeneneh, for always being friendly since we met in the introductory course. I am so grateful to have many amazing friends during my seven years in Sweden. To our lovely members of ‘Dr.Her Club’, Yueshi, Simei and Xiaojing, thank you for your warmest companionship with Girl power. Hongwei, for being helpful with my car and on the course. Kun, Xiongzhuo and Chen Hou, for sharing numerous enjoyable moments and always being by my side. Yunpo, for being funny during lunch break and helping me with the IHC phototaking. Thank Liqun and Xin Li for your warm friendship and all the joy brought by Muchen. Bojing, you are such a reliable friend, I will miss the days driving in the dark to the stables with you. Li Yu and Wei Yuan, you knew you are the ‘stockhom yellow page’ and super helpful friends. Many thanks also go to the ‘Laowuzei’s (the old friends in Uppsala) named Jinzhi Hu, Shuang Gao, Weilin, Xue Li, Chengxi Shi, Li Li, Liang Tian, Caihong and Chengjun Wu for all the help and all the memorable time. Biao Wang, thanks for introducing me to the exciting world of techno startups. Special thanks to Yang Sun for all the meaningful discussions about science and life. Maria, I really appreciate your friendship which transcends country, age and field. Johnny, my best sharer ever, I am truly grateful for your listening and support all through these years. Du Yeye, my respectable life mentor, thank you for motivating me with your great wisdom. To my beloved Kearon, thank you for coming, for sharing life with me now and in the future. To my dearest family and friends in China, in particular my parents and grandparents, thanks for giving me respect, freedom, support and unconditional love in my growth. 35 REFERENCES 1. Miller LD, Russell MH, Alexandre G. Diversity in bacterial chemotactic responses and niche adaptation. Adv Appl Microbiol 2009;66:53–75. 2. Lebeer S, Vanderleyden J, De Keersmaecker SCJ. 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