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8.2 Structure of DNA KEY CONCEPT DNA structure is the same in all organisms. 8.2 Structure of DNA • We love D N A • Made of nucleotides • Sugar, Phosphate and a Base • Bonded down one Side • Adenine and Thymine • Make a Lovely Pair • Cytosine without Guanine • Would feel very bare •O-O-O deoxy-ribo-nucleic acid •R-N-A is ribo-nucleic acid 8.2 Structure of DNA • DNA is made up of a long chain of nucleotides. • Each nucleotide has three parts. – a sugar – deoxyribose – phosphate group – a nitrogen-containing base phosphate group deoxyribose (sugar) nitrogen-containing base 8.2 Structure of DNA • The nitrogen containing bases - Adenine (A) - Thymine (T) - Cytosine (C) - Guanine (G)) * Purines – have 2 rings = Adenine & Guanine * Pyrimidines – have 1 ring = Cytosine & Thymine 8.2 Structure of DNA Watson and Crick determined the three-dimensional structure of DNA • 1953 • Two nucleotide chains that wrap around each other to form a double spiral (double helix) - Temperature liable – a change in T can break apart the DNA strand 8.2 Structure of DNA • Rosalind Franklin and Erwin Chargaff. – Franklin’s x-ray images suggested that DNA was a double helix of even width. – Chargaff’s - Complementary Base Pairing - A=T and C=G. 8.2 Structure of DNA Nucleotides always pair in the same way. • Because a pyrimidine (single ring) pairs with a purine (double ring), the helix has a uniform width. • A-T • C-G G C A T 8.2 Structure of DNA • The backbone is connected by covalent bonds. • The bases are connected by hydrogen bonds. hydrogen bond covalent bond 8.3 DNA Replication 8.2 Structure of DNA KEY CONCEPT DNA replication copies the genetic information of a cell. 8.3 DNA Replication 8.2 Structure of DNA Replication copies the genetic information. • The rules of base pairing direct replication. • A-T • G-C • DNA is replicated during the S stage of interphase. 8.3 DNA Replication 8.2 Structure of DNA Proteins (Enzymes) carry out the process of replication. • DNA serves as a template. 1. Helicase – enzyme that breaks the Hydrogen bonds between the bases • Replication Fork – point at which the two chains separate (last bond broken) nucleotide The DNA molecule unzips in both directions. 8.3 DNA Replication 8.2 Structure of DNA 2. New complimentary nucleotide bases pair up on both sides of old DNA template 3. DNA polymerase (enzyme) forms new Hydrogen bonds between the nucleotides new strand nucleotide DNA polymerase 8.3 DNA Replication 8.2 Structure of DNA • Two new exact copies of DNA are formed, each with an original strand and a newly formed strand. original strand Two molecules of DNA new strand 8.3 DNA Replication 8.2 Structure of DNA Replication is fast and accurate. • DNA replication starts at many points in eukaryotic chromosomes. There are many origins of replication in eukaryotic chromosomes. • Mutation – change in the nucleotide sequence • DNA polymerases can find and correct errors. • Error Rate - one error per 1 billion nucleotides 8.2 of DNA 8.4 Structure Transcription • RNA differs from DNA in three major ways. 1. RNA has a ribose sugar. 2. RNA has uracil instead of thymine. U -A 3. RNA is a single-stranded structure. 8.2 of DNA 8.4 Structure Transcription Three types of RNA. Mesenger RNA (mRNA) – single uncoiled chain– • carries genetic information from the DNA in the nucleus to the cytoplasm Transfer RNA (tRNA) – single chain of about 80 • RNA nucleotides folded into a hairpin shape – • binds to specific amino acids Ribosomal RNA (rRNA) – makes up the ribosomes where proteins are made 8.2 of DNA 8.4 Structure Transcription • Process of copying DNA into mRNA • RNA polymerase – starts RNA transcription by binding to specific regions of DNA – Promoters • RNA polymerase breaks H-bonds and makes H-bonds between the DNA bases • One chain is used as a template to build RNA (mRNA=transcript) • Transcription continues one nucleotide at a time until the RNA polymerase reaches a DNA region – termination signal start site transcription complex nucleotides 8.2 of DNA 8.4 Structure Transcription The transcription process is similar to replication. • The two processes have different end results. – Replication copies all the DNA; transcription copies a gene. one gene growing RNA strands DNA 8.2 of DNA 8.5Structure Translation KEY CONCEPT Translation converts an mRNA message into a protein. 8.2 of DNA 8.5Structure Translation Amino acids are coded by mRNA base sequences. • Codon – 3 nucleotides of mRNA • AUG = start • UAA, UAG, UGA = stop codon for methionine (Met) codon for leucine (Leu) 8.2 of DNA 8.5Structure Translation • The genetic code matches each codon to its amino acid 8.2 of DNA 8.5Structure Translation • tRNA – transports amino acids to the ribosomes • Anticodon – tRNA sequence of 3 nucleotides – complementary to an mRNA codon. 8.2 of DNA 8.5Structure Translation Ribosomes that are attached to the endoplasmic reticulum build proteins for use outside cell Ribosomes that are free floating make proteins for use inside cell 8.2 of DNA 8.5Structure Translation • For translation to begin - Ribosomes attaches to a start codon on mRNA (AUG) • Start codon pairs with the anticodon on tRNA (UAC) • codes for the first amino acid – methionine – may be removed later if not needed 8.2 of DNA 8.5Structure Translation • Amino acids are bonded together with peptide bonds 8.2 of DNA 8.5Structure Translation – Once the stop codon is reached, the ribosome releases the protein 8.2 of DNAand Regulation 8.6 Structure Gene Expression KEY CONCEPT Gene expression is carefully regulated in both prokaryotic and eukaryotic cells. 8.2 of DNAand Regulation 8.6 Structure Gene Expression • A promotor is a DNA segment that allows a gene to be transcribed. • An operator is a part of DNA that turns a gene “on” or ”off.” – The lac operon was one of the first examples of gene regulation to be discovered. – The lac operon has three genes that code for enzymes that break down lactose. 8.2 of DNAand Regulation 8.6 Structure Gene Expression • RNA processing is also an important part of gene regulation in eukaryotes. – Introns are nucleotides that are removed and exons nucleotides that are spliced together. 8.2 of DNAand Regulation 8.6 Structure Gene Expression Coding DNA (genes) make proteins • Humans = 20,000 Non-coding DNA (genes) make RNA (transcribed but never translated) • Human = 500 Human Total = ~ 20,500 genes