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Molecular Structure & Function of Genetic Material Professor Janaki Natalie Parikh [email protected] D.N.A. Structure • D.N.A.: deoxyribonucleic acid: is a double stranded (dbl helix) polymer of a nucleotides • Resides in the nucleus (eukaryotes) • Made of 3 molecules: • Phosphate, Sugar & nitrogenous base DNA • • • • • • 4 bases in D.N.A.: Adenine, Guanine, Thymine & Cytosine Rules for pairing bases together: Adenine Thymine Guanine Cytosine Our DNA is composed of literally billions of bases! Genes are long sections (segments) of D.N.A. D.N.A. Function • 1. D.N.A. can make a copy of itself, handy during? • Mitosis & meiosis • 2. D.N.A. contains the code for protein synthesis, the manufacture of proteins • Problem, where does protein synthesis take place? • Ribosomes, located? Outside the nucleus. D.N.A. can’t leave the nucleus. So how does this get done? R.N.A. • R.N.A.: ribonucleic acid, single stranded, free floating throughout the cell • Similar bases, w/ 1 important diffc. • Adenine, Guanine, Uracil & Cytosine • Adenine Uracil Guanine Cytosine • R.N.A assists in completing protein synthesis Protein Synthesis • Proteins: polymers as well, but difft. components? • Amino acids. How many are there? • 20 total. Of these 11 are naturally occuring, the other 9 must be consumed through food, those are known as “essential amino acids” (in kids 10 are essential, 1 loses this status once we produce it) • How do we get these essential amino acids? • http://www.glisonline.com/aminoacids.php • http://www.all-creatures.org/health/plantfoods.html Protein Synthesis • Recall our logistical dilemma? • Making proteins: multi-step task • Cheesy analogy: outside of the nucleus is the “hood”, the nucleus: gated commty • D.N.A.: Doesn’t kNow About the hood • However, D.N.A.’s cousin, R.N.A. is another story • R.N.A.: Really kNows About the hood Steps of Protein Synthesis • 1.transcription: m.R.N.A. enters nucleus, produces a transcript of D.N.A. code (in R.N.A. language) • Let’s try part of a sequence: • D.N.A. reads: A T A G A G mRNA? • m.R.N.A.: U AU C U C • 2. translation: t.R.N.A. reads the mRNA transcript & translates the info one codon at a time Codons & Genetic Code • Codons: base triplet that codes for an amino acid • Notice: genetic redundancy: more than 1 codon codes for the same amino acid (we’ll discuss signifcance of this redundancy subsequently) Protein Synthesis • Back to our 2nd step: mRNA: U A U C U C tRNA: A U A G A G • Amino acid: Isoleucine, Glutamic Acid Genetic Redundancy • Sometimes mistakes occur in this process (mutation) • Problem: even 1 incorrect base can render a protein useless junk (loss of function) • Remember genetic redundancy? It’s purpose: • Serves as an built-in security mechanism, reducing the chance that a base substitution resuls in loss in protein function Mutations Overview • Mutagens: accelerate the rate of mutations • Mutations are completely random accidents • Most mutations result in loss in protein function (junk protein), some are neutral, Rarely: new protein function producted • (Ecstasy q: http://www.maps.org/media/mtvclarify.html • http://www.shroomery.org/forums/showflat.php/Cat/0/Number/6307333 Mutations • Point mutations: involve 1 single base – Base substitution: swapping of nucleotide base • Can possibly be neutral due to genetic redundancy – Addition or deletion: extra base insert or a base is omitted from correct sequence • Results in a frameshift mutation (affects multiple amino acids) & can never be neutral • http://evolution.berkeley.edu/evosite/evo101/IIIC3aT ypes.shtml Chromosomal Mutations • Chromosomal mutations (macrolesions): occur during meiosis, larger scale of significance since whole chromosome involved • Nondisjunction: chromosome pair failed to split • http://www.biostudio.com/d_%20Meiosis.htm • http://www.biostudio.com/d_%20Meiotic%20Nondisjunction%20Meiosi s%20II.htm • Results in a gamete w/ too many, or too few chromosomes Trisomy & Monosomy • Trisomy: presence of 3 chromosomes instead of the normal 2 in a homologous pair • Monosomy: presence of 1 chromosome instead of the normal 2 in a homologous pair • Examples? • Down’s syndrome: trisomy of #21 • http://www.ndss.org/PageFiles/2588/Maternal%20Age%20Chart2.png Syndromes • Klinefelter’s Syndrome: XXY or XXXY • Turner’s Syndrome: X0 • http://www.nichd.nih.gov/health/topics/klinefelter_syndrome.cfm • http://www.merck.com/mmhe/sec23/ch266/ch266b.html Mutations & Evolutionary Significance • In order for a mutation to have an evolutionary impact, it must be inheritable (happens in the gametes) • Next, we’ll examine a specific point mutation that had a major impact on human populations