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Chapter 13: Characterizing and Classifying Viruses, Viroids, and Prions Characteristics of Viruses A virus is a minuscule, acellular, infectious agent having one or several pieces of nucleic acid (DNA or RNA, never both). They have no plasma membrane (some have a membrane like envelope), cytosol, or organelles. They are not capable of metabolic activity on their own, outside of the cell, called a virion. Virions consist of a protein coat, a capsid, that surrounds the nucleic acid core. The capsid or envelope (if present) provides protection and recognition, allows for binding to host cells. Viruses can be classified by their genetic material, cells they attack, size, nature of capsid coat, their shape, and the presence or absence of an envelope. Genetic Material 1. dsDNA2. ssDNA3. ssRNA4. dsRNAHosts of Viruses -Most viruses infect only particular host’s cells (liver, lung, heart, etc) -Some viruses are generalists, can infect many kinds of cells in many different hosts (rabies). -Viruses attack every type of living cell, first viruses found in tobacco plants Size of Viruses -Smallest viruses are about 24 nm while the largest are 500 nm (smallest bacteria) 1 Nature of Capsid -CapsomeresViral Shapes -There are three basic shapes of viruses Viral Envelope -Enveloped viruses acquire their envelope from the host cell during viral replication or release. Classification of Viruses All viruses can be placed in a family, but only 3 viral orders have been established. Family names are usually derived from special characteristics or important members of the family. -Picornaviridae = very small RNA virus -Hepadnaviridae = DNA virus that causes hepatitis B Species names are not Latinized, but use common English designations Viral ReplicationLytic replication usually consists of five stages 2 -Burst time-Burst size*Follow the steps in figure 13.8 to see the lytic cycle of the T4 bacteriophage* Lysogenic replication- similar to lytic, but includes an additional portion. *Follow the steps in figure 13.11 to see the lysogenic cycle of the Lambda phage* Replication of animal viruses- very similar to bacteriophages, but differ in the presence of envelopes around some viruses. -There are three mechanisms of entry for animal viruses: 1. direct penetration2. membrane fusion3. endocytosis- Synthesis of animal viruses- remember these two questions: How is mRNA synthesized? What molecule serves as a template for nucleic acid replication? **See Biosynthesis of DNA and RNA Viruses Handout** Assembly and Release of Animal Viruses -Most DNA viruses assemble in the nucleus, whereas most RNA viruses assemble in the cytosol. 3 -Bacteriophages replicate much quicker than animal viruses; 25 min to 24 hrs. -Enveloped animal viruses released via budding, where the mature virions are enveloped by some membrane (nuclear, endoplasmic, or plasma) as they are released from the cell. -Infected host cells that gradually release enveloped viruses are called persistent infections, host cell can live for a while as viruses are slowly being released. -Naked animal viruses can be released by exocytosis or cause lysis and death of the cell. Latency of Animal Viruses -Latent animal viruses are similar to lysogenic bacteriophages, but differ in that not all latent animal viruses are incorporated into host genome, whereas lysogenic bacterial viruses always do. -Proviruses become a permanent part of the host chromosome, induction (excision of viral genome) does not happen. Role of Viruses in Cancer Multicellular animal cell division is under strict genetic control -neoplasia-tumorSome tumors are benign; remain in one place and are not generally harmful. Some are malignant; invade other tissues and travel throughout the body, producing new tumors (metastisis) Malignant tumors are also called cancers; which rob normal cells of space and nutrients, and can cause pain. Proto-oncogenes play a role in cellular division. When proto-oncogenes are repressed, no cancer results. Various factors can contribute to inactivation of oncogene repressors or activation of oncogenes: 4 Viruses can cause cancer in several ways Culturing Viruses in the Laboratory Viruses must be cultured in order to conduct research and develop vaccines and treatments. Three main ways: whole organisms, embryonated eggs, and cell cultures. 1. Culturing Viruses in Whole Organisms- can be in bacteria or plants and animals. 2. Culturing Viruses in Embryonated Chicken Eggs 3. Culturing Viruses in Cell (Tissue) Culture Other Parasitic Particles: Viroids and Prions Viroids- extremely small, circular pieces of RNA that are infectious and pathogenic in plants. Prions- proteinaceous infective agents, contain no nucleic acid. Cellular PrPPrion PrP- 5