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Genetic Engineering, Evolution, and Diversity Topic 23 I. Genetic Engineering A. artificial selection - individuals with desirable traits are mated to produce offspring with those traits B. inbreeding - offspring with desirable traits are mated with one another C. hybridization - two varieties of a species are mated D. Genetic research 1. Cloning - producing identical offspring from a single cell of an organism 2. Genetic engineering - transfer of genes from one organism to another producing recombinant DNA – see example on board 3. Human Genome – mapped out human DNA II. Evidence of Evolution A. evolution – idea that organisms have changed over time – provides understanding for the diversity of life on earth B. fossil record 1. fossils – preserved impressions or remains of organisms a. hard bony parts b. amber c. tar d. ice 2. dating of fossils a. comparative dating – compare the fossils with the layers that they are found in – does not give an exact date b. radioactive dating to find the actual date of the fossil – for example, use carbon 14 3. problems with fossils – although fossils have revealed a great deal about how organisms have changed, there are gaps in history – these gaps are probably due to the scarcity of fossils or a difficulty in finding them – some people believe that the gaps mean that evolution did not occur C. Comparative Anatomy – examine internal and external structures to find similarities and differences 1. homologous structures – same anatomical structures but perform different functions – for example, the bones in the wing of a bird and the bones in the flipper of a whale are similar in structure but they are used for different functions such as flying and swimming 2. analogous structures – different structures but similar functions – for example the structure of the wing of a butterfly and the wing of a bird are different in structure but similar in function (flying) a. convergent evolution – evolution of structures that are the same for a common function but not derived from a common ancestor – analogous structures are not used as a basis for classification 3. vestigial structures – structures that are no longer used such as the appendix and the tonsils – as things changed and evolved, these structures were no longer needed – the appendix for example is small and useless in humans but assist digestion of cellulose in herbivores indicating humanity’s vegetarian ancestry D. Comparative embryology – comparison of embryos and embryonic development E. Molecular Evolution (part of comparative biochemistry) – comparison of genes and proteins to determine if there is an evolutionary relationship – the closer the genetic sequences, the more closely related they are in evolution 1. molecular clock – the rate of change in a gene over time F. Comparative cytology – the study of similar organelles found in a cell such as the mitochondria or ribosomes III. History of Evolutionary Theories A. Lamark (1) use and disuse – organisms develop new organs or change their existing ones in order to meet their changing needs (2) acquired characteristics – parents pass on traits they acquire during their lifetime B. Weismann - disproved Lamarck’s theory of acquired characteristics by taking the tails off of mice and allowing them to mate - none of the offspring were missing tails C. Darwin - theory of natural selection - main theories: a. overproduction - more offspring are produced in each generation than can survive b. competition - individuals of each generation compete for the available food and to reproduce c. variation - some organisms are better adapted to survive d. survival of the fittest - individuals that are better adapted will survive e. adaptations will be passed on to future generations D. DeVries - discovered mutations which Darwin failed to account for IV. Rate of Evolution A. rate of change 1. Gradualism - evolution occurs gradually, slowly and continuously 2. Punctuated equilibrium - species tend to stay the same for a long period of time and then change quickly then stay the same for a long period of time and then change V. Heterotroph Hypothesis A. heterotroph hypothesis - helps describe how life may have begun on earth B. primitive conditions - no free oxygen, had hydrogen, ammonia, and methane - had water, temp was very high - lots of energy C. synthesis reactions - organic molecules were made from inorganic molecules D. aggregates of organic molecules organic molecules cluster together to form aggregates E. reproduction - aggregates got to be large and started to split apart (reproduce) F. anaerobic respiration - released carbon dioxide to the atmosphere G. development of autotrophs - used carbon dioxide to produce their own food H. aerobic respiration - autotrophic activity releases oxygen which allows for aerobic respiration VI. Mechanisms of Evolution A. Evolution does not occur in a single individual but in a population of a species 1. population – group of individuals of the same species that live in a certain area and interbreed 2. species – group of individuals that are able to breed with each other and produce offspring that are able to have more offspring 3. gene pool – all of the alleles in a population 4. gene frequency – how often an allele is found in the gene pool 5. sexual reproduction constantly mixes alleles in a population which provides new combinations – through meiosis and random mating 6. mutations can create new alleles 7. evolution is caused by changes in the gene pool of a population over time B. Hardy-Weinberg principle and population changes 1. allele frequencies in a gene pool of a population determine how many individuals in a population get each allele 2. in allele frequencies p (frequency of the dominant allele) + q (frequency of the recessive allele) = 1 3. Hardy-Weinberg principle Allele frequencies in a population will remain constant from generation to generation as long as certain criteria are met: (1) random mating must occur – no organisms can be isolated (2) no migration into (immigration) or out of (emigration) can take place (3) there must be no mutations (4) large populations are required (5) no natural selection 4. Mathematical formula for the HardyWeinberg equilibrium principle example #1: p stands for tallness and is .80 this means that q would have to be .20 because p+q=1 so 1-p=q so 1-.80=.20 so q=.20 Example #2: For a population, eggs x sperm = offspring (p+q)(p+q) = p2 + 2pq + q2 = 1 p = frequency of dominant allele q = frequency of recessive allele p2 = frequency of homozygous dominant individuals 2pq = frequency of heterozygous individuals q2 = frequency of homozygous recessive individuals Example #3 In a certain population, the frequency of homozygous curly hair (CC) is 64%. What percentage of the population has curly hair? VII. Disruption of Hardy-Weinberg Equilibrium in Evolution mutation – provide a source of variation in a population B. gene flow – if two populations are separated from each other and do not interbreed, then the allele frequencies in their gene pools may be different from each other – if individuals move between the populations, they create a gene flow which alters the allele frequency A. C. population size (1) small population – random events can alter the gene pool (2) genetic drift – changes in the gene pool caused by random events in a small population (3) population bottleneck – if a flood suddenly and dramatically reduces the size of a population, the allele frequencies of the survivors are not necessarily the same as the allele frequencies in the original population (4) founder effect – colonization of a new habitat Nonrandom mating – Sexual selection – mating must be random, however; individuals are usually discerning in mate selection which prevents the Hardy-Weinberg equilibrium D. E. natural selection (1) stabilizing selection - does not change the average, but makes the curve around the average sharper, so that values in the population lie closer to the average (2) disruptive selection – the peak value is selected against – the two extremes are selected for (3) directional selection – alters the average value for a trait VIII. Speciation speciation – creation of a new species – occurs when the gene pool for a group of organisms becomes reproductively isolated A. (1) allopatric speciation – two populations of a species are separated geographically or by a physical barrier (2) adaptive radiation – production of a number of different species from a singe ancestral species – called divergent evolution – shown by Darwin’s finches (3) sympatric speciation – speciation by populations that occupy the same region – must be reproductively isolated while still living in the same region – ex. polyploidy