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Chapter 2 Notes Anatomy & Physiology Matter—anything that has weight and takes up space Mass—the amount of matter in an object Periodic Table of Elements—shows a listing of all known elements Group—vertical columns on the periodic table Period—horizontal rows on the periodic table Atom—smallest unit of all matter 2 Regions of the atom: 1.) Nucleus—dense center of the atom 2.) Electron Cloud—the region outside the nucleus *arranged in levels around the nucleus 1st level—can hold up to 2 electrons 2nd level—can hold up to 8 electrons 3rd level—can hold up to 18 electrons 4th level and beyond—can hold up to 32 electrons Protons—positive subatomic particle found inside the nucleus Neutrons—neutral subatomic particle found inside the nucleus Electron—negative subatomic particle found in the electron cloud outside the nucleus Elements—substances that cannot be broken down chemically into simpler matter Atomic Number—number of protons inside the nucleus Isotopes—Atoms of the same element that have a different number of neutrons Mass Number—the sum of Protons and Neutrons in the nucleus (P + N) Radioisotopes—radioactive isotopes that have unstable nuclei —the nuclei release particles or energy (or both) changing the mass # Compounds—combination of two or more elements chemically combined Shows the kind, and proportions of atoms Ex.) H2O CO2 NaCl HCl Physical Property—a characteristic in appearance only Ex.) Size, Shape, Color or State of Matter Chemical Property—a characteristic in the chemical makeup of the object Ex.) Flammability, Rust, Digestible Ion—Charged particle created when one atom loses or gains electrons Ionic Bonds—bond between 2 atoms when one loses and one gains electrons **formed when a metal and a non-metal combine Covalent Bond—bond between 2 atoms when they share electrons Molecule—a compound held together by a covalent bond Solution—mixture where the substances are evenly spread out Solute—the substance being dissolved into the solvent Solvent—the substance that dissolves the solute Aqueous Solutions—when a solute is dissolved into water pH Scale—shows whether a substance is an acid or a base In solution—water molecules break up into H+ and OH- ions (Hydroxide) —if the H+ attaches to another water, it becomes H3O+ (Hydronium) if there are more Hydronium ions than Hydroxide, it is an Acid if there are more Hydroxide ions than Hydronium, it is a Base *Delicate Balance of Acids and Bases in Nature* 7 is neutral (Pure Water) 0-7 Acidic Solution 7 – 14 Basic Solution (also called Alkaline) Acid—Contains more Hydronium than Hydroxide ions burn skin highly corrosive sour taste Base—Contains more Hydroxide than Hydronium ions slippery feel bitter taste Energy—ability to do work or cause change Can take on many forms: Light, Heat, Electrical, Chemical, and Mechanical energy is transferred from one form to another Work—movement of a mass over a certain distance Potential Energy—energy of position or condition —think of what the object “could” do 3 forms of Potential Energy: 1.) Gravitational Potential Energy 2.) Chemical Potential Energy 3.) Elastic Potential Energy Kinetic Energy—energy of motion Chemical Reaction—the process of breaking chemical bonds —forms new bonds and new substances Chemical Equation—shows a chemical reaction in written form Reactants—everything on the left hand side of the equation Products—everything on the right hand side of the equation (produced) Activation Energy—amount of energy required for the reaction to begin Exothermic Reaction—amount of energy given off is greater than the Activation Energy Endothermic Reaction—Activation Energy is greater than energy given off In nature—reactions occur in a series so as not to disrupt cells and metabolism Organic Compound—structure contains Carbon Derived from living things Inorganic Compound—Derived from non-living things Water—molecule with a covalent bond Polar compound—has a positive and a negative end Carbon Compounds—can form 4 covalent bonds to become stable Can be: 1.) straight chains 2.) branched chains 3.) rings 3 most common Carbon Compounds: a.) Sugar b.) Fats c.) Proteins Monomer—simple molecule; a building block for larger molecules 4 Essential Organic Compounds: 1.) Carbohydrates 2.) Lipids 3.) Proteins 4.) Nucleic Acids Carbohydrates—composed of Carbon, Hydrogen and Oxygen in a ratio of 2 H : 1 O *With the ratio, the number of Carbon can vary* Can exist as a: a.) Monosaccharide (1) b.) Disaccharide (2) c.) Polysaccharide (3) Monosaccharide—simple sugar with a ratio of 1 C : 2 H : 1 O Three common monosaccharides: Glucose, Fructose and Galactose Glucose—main source of energy for plants and animals/ made by plants during photosynthesis Fructose—found in fruits Galactose—found in milk Disaccharide—Double Sugar combination of two monosaccharides (by way dihydration synthesis) Two common disaccharides: Sucrose—found in sugar cane Lactose—found in milk Polysaccharide—combination of three or more monosaccharides formed by linked monosaccharides (by way of dihydration synthesis) Three common polysaccharides: Glycogen Starch Cellulose Lipids—fatty compound made up of Carbon, Hydrogen and Oxygen Large amounts of Carbon and Hydrogen, Small amount of Oxygen Three common examples of lipids: Fats Oils Wax **Lipids are non polar and do not dissolve in water** Cell membranes—composed of lipids to create a barrier for the cell Carbon—Hydrogen Bondsstore more energy than a Carbon—Oxygen Bond Fatty Acid—monomers that make up most lipids (with a polar and a non-polar end) Structure—long, straight Hydrocarbon chain with a Carboxyl group at one end (COOH) Triglycerides—Macromolecule where three fatty acids are attached to a glycerol molecule Two main Triglycerides: 1.) Oil—liquid triglyceride at room temperature (usually found in plants) 2.) Fat—solid triglyceride at room temperature (usually found in animals) Wax—consists of a long fatty acid chain joined to a long alcohol chain —are highly waterproof Steroid—composed of four carbon rings —considered a lipid because they don’t dissolve in water Proteins—composed of Carbon, Hydrogen, Oxygen and Nitrogen Formed from the linkage of monomers called Amino Acids Amino Acids—form proteins (20 different kinds of Amino Acids) Structure—a central Carbon atom with four covalently bonded atoms: Hydrogen atom, Carboxyl group, Amine group (NH2) and an R group Dipeptide—two Amino Acids bonded together Peptide Bond—joins these two Amino Acids Dihydration Synthesis—an Amino Acid joins another Amino Acid Amine group gives up a Hydrogen ion Carboxyl group gives up a Hydroxide ion Water is formed, and Amino Acids are joined Polypeptide—long chain of Amino Acids Protein—composed of 2 or more polypeptides Catalyst—substances that speed up chemical reactions Enzymes—proteins that act as catalysts, essential to cell functioning lowers a cell’s activation energy to maintain it’s metabolism binds to a certain molecule called a substrate the reaction occurs, products are produced, enzyme moves on Nucleic Acids—complex organic molecules that store important info from the cell 2 most important: a.) DNA—Deoxyribonucleic Acid stores information that is essential for almost all cell activities b.) RNA—Ribonucleic Acid stores and transfers info essential for the building of proteins Nucleotides—monomers that make up DNA and RNA DNA nucleotides have three parts: 1.) Deoxyribose Sugar—five Carbon sugar 2.) a Phosphate Group—contains Phosphorus and Oxygen 3.) a Nitrogen “base” Nitrogen Bases—there are four different kinds: Adenine Thymine Cytosine Guanine Replication The process of the duplication of a DNA molecule Ribonucleic Acid composed of Nucleotides Different from DNA in 3 ways: 1.) only a single strand (DNA is double stranded) 2.) has Ribose sugar (instead of Deoxyribose) 3.) Three bases are: Cytosine & Guanine / Adenine & Uracil (no Thymine) There are three forms of RNA: 1.) Messenger RNA (mRNA)—a single uncoiled strand 2.) Transfer RNA (tRNA)—single folded strand of RNA that allows complementary bases to pair up 3.) Ribosomal RNA (rRNA)—RNA in a globular form TranscriptionRNA is produced from a DNA double helix Translation assembling protein molecules from information encoded in mRNA