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11/19/14 BIOSC 041 Descent with Modification: A Darwinian View of Life Reference: Chapter 22 Outline v Paradigm shifts in science world v Fundamental tenets of evolution v Examples and evidence v Natural selection v Darwin’s Paradigm shifts in science v A new era of biology began in 1859 when Charles Darwin published The Origin of Species v The Origin of Species focused biologists’ attention on the great diversity of organisms v The Origin of Species arose from, and gave rise to, one of the greatest paradigm shifts in science, one that is still going on today Paradigm Shift v Accepted § v Accepted § view on a particular topic is challenged Evidence accumulates from various sources view shifts to new understanding Seemingly overnight- but not really… v Examples § Geocentrism vs. Heliocentrism § Round vs. Flat Earth § Microbiology § Evolution In Darwin’s Day… In Darwin’s Day… v Age v Animals § § of the Earth 5,000-6,000 years old Earth was static § Oceans, mountains, etc. were fixed & did not change except through divine action (e.g. Flood) v Earth § strata § § & Plants Created at the same time Humans at the top of a “great chain of being” v Fossils § § Believed to be the bones of demons/dragons OR Strange mineral deposits that “grew” in the earth Formed in place, within the earth 1 11/19/14 Paradigm Challenge v Evidence was mounting that challenged traditional views of a young Earth inhabited by unchanging species § § § New views on geology New views on religion and human societies New views on biology § Earlier paradigm shift – microorganisms § Anatomical and developmental similarities between very different groups of organisms Ideas About Change over Time - Catastrophism The study of fossils helped to lay the groundwork for Darwin’s ideas v Paleontology, the study of fossils, was largely developed by French scientist Georges Cuvier v Cuvier advocated catastrophism, speculating that each boundary between strata represents a global, geologic catastrophe (e.g. volcano, flood, etc.) v Darwin’s Research – H.M.S. Beagle Scala Naturae and Classification of Species Greek philosopher Aristotle viewed species as fixed and arranged them on a scala naturae (ladder of nature) v The Old Testament holds that all species were individually designed by God and therefore perfect v Carolus Linnaeus interpreted organismal adaptations as evidence that the Creator had designed each species for a specific purpose v Ideas About Change over Time - Uniformitarianism v v v Darwin’s Research – H.M.S. Beagle v Darwin served as naturalist during a 5-year around the world voyage on the Beagle, where he collected specimens of South American plants and animals v Observed that fossils resembled living species from the same region, and living species resembled other species from nearby regions v Experienced an earthquake in Chile and observed the uplift of rocks Geologists James Hutton and Charles Lyell perceived that changes in Earth’s surface can result from slow continuous actions still operating today Lyell’s principle of uniformitarianism states that the mechanisms of change are gradual and constant over time This view strongly influenced Darwin’s thinking v v v Darwin was influenced by Lyell’s Principles of Geology and thought that the earth was more than 6000 years old His interest in geographic distribution of species was kindled by a stop at the Galápagos Islands west of South America He hypothesized that species from South America had colonized the Galápagos and speciated on the islands 2 11/19/14 Figure 22.5 Figure 22.2 1809 Lamarck publishes hypothesis of evolution. 1798 Darwin in 1840, after his return from the voyage Malthus publishes “Essay on the Principle of Population.” HMS Beagle in port Great Britain EUROPE Genovesa Isabela 0 20 40 Santa Santa Cruz Fe Florenza Kilometers Equator SOUTH AMERICA Equator Daphne Islands Chile PACIFIC OCEAN San Cristobal Española Andes Mtns. Marchena Santiago Pinzón Fernandina 1830 Lyell publishes Principles of Geology. AFRICA PACIFIC OCEAN Pinta Brazil Malay Archipelago PACIFIC OCEAN 1790 Charles Darwin is born. Cape of Argentina Good Hope Cape Horn 1831-36 1809 AUSTRALIA Tasmania New Zealand 1858 Cuvier publishes extensive studies of vertebrate fossils. Hutton proposes principle of gradualism. ATLANTIC OCEAN The Galápagos Islands 1812 1795 NORTH AMERICA Darwin travels around the world on HMS Beagle. While studying species in the Malay Archipelago, Wallace (shown in 1848) sends Darwin his hypothesis of natural selection. 1859 1870 On the Origin of Species is published. 1844 Darwin writes essay on descent with modification. The Galápagos Islands Darwin’s Focus on Adaptation In reassessing his observations, Darwin perceived adaptation to the environment and the origin of new species as closely related processes § Coined the term “descent with modification” to describe his hypothesis for perceived similarities and differences between species v Modern evolutionary biologists have confirmed Darwin’s hypothesis regarding Galapagos finches and iguanas (and other species as well) v Natural Selection v Darwin based his theory of natural selection on two key observations: 1. 2. Overproduction Heritable variation among individuals On The Origin of Species v In 1844, Darwin wrote an essay on natural selection as the mechanism of descent with modification, but did not introduce his theory to a wide public audience v Natural selection is a process in which individuals with favorable inherited traits are more likely to survive and reproduce v In 1858, Darwin received a manuscript from Alfred Russell Wallace, who had developed a theory of natural selection similar to Darwin’s v Darwin quickly finished The Origin of Species and published it the next year Observation 1: Overproduction v All species tend to produce excessive numbers § § Leads to a struggle for existence Now known as intraspecific competition v Individuals compete with one another for food and other resources 3 11/19/14 Observation 2: Individual variation v Variation § § Darwin’s Big Leap exists among individuals in a population v Now known as phenotypic variation Phenotype = physical trait expressed v Much of this variation is heritable v The result of natural selection is evolutionary adaptation Observation à Inference § Favorable traits that are heritable become more common § Unfavorable traits become more rare Why? § Those individuals with traits best suited for the local environment are more successful § Leave behind more offspring § Pass along more of their genes Sources of Genetic Variation Mutations and sexual recombination § Mutations are changes in the DNA of an organism § Sexual recombination shuffles alleles during meiosis v Sources of genetic variation occur at the level of the individual v Natural selection may act at the level of the individual v (b) A Trinidad tree mantid that mimics dead leaves BUT v (a) A flower mantid in Malaysia (c) A leaf mantid in Costa Rica Natural Selection does not act on the individual v Evolution acts at the level of the population Lamarck: believed that characteristics acquired by the individual can be passed on to offspring Natural Selection acts on populations (next lecture) v Relies on heritable, phenotypic variation within a population 4 11/19/14 Descent from a common ancestor Evolution is supported by an overwhelming amount of scientific evidence v Darwin’s 1. § § § ideas explained three broad observations: The unity of life The diversity of life The match between organisms and their environment v Darwin never used the word evolution in the first edition of The Origin of Species v The phrase descent with modification summarized Darwin’s perception of the unity of life v The phrase refers to the view that all organisms are related through descent from an ancestor that lived in the remote past 1. Evidence of Evolution – Fossil Record Fossil Record Comparative Anatomy Comparative Embryology Comparative Genomics Biogeography Artificial Selection Evolution in Real Time 2. 3. 4. 5. 6. 7. Figure 22.20 Other even-toed ungulates The fossil record provides evidence of the extinction of species, the origin of new groups, and changes within groups over time v Fossils can document important transitions § For example, the transition from land to sea in the ancestors of cetaceans v Hippopotamuses †Pakicetus †Rodhocetus Common ancestor of cetaceans †Dorudon Living cetaceans 70 2. Evidence of Evolution – Homology & Comparative Anatomy v Comparative anatomy § Comparison of body structure between species § Homology § Similarity in structures due to common ancestry 60 50 40 30 20 Millions of years ago 10 0 Key Pelvis Femur Tibia Foot 3. Evidence of Evolution – Comparative Embryology v Comparative § Embryology the comparison of common structures that appear during the development of different organisms 5 11/19/14 4. Evidence of Evolution – Genomic Similarities v Evolutionary relationships among species § § § Leave markers in DNA and proteins Can be determined by comparing genes and proteins of different organisms Another type of homology Island Biogeography v Endemic species are species that are not found anywhere else in the world v Islands often have endemic species closely related to species on the nearest mainland or island v Darwin explained that species on islands gave rise to new species as they adapted to new environments 7. Evidence of Evolution - Direct Observations v Two examples provide evidence of natural selection § Natural selection of introduced plant species § Evolution of drug-resistant bacteria 5. Evidence of Evolution - Biogeography v v v Biogeography is the geographic distribution of species Earth’s continents were formerly united in a single large continent called Pangaea, but have since separated by continental drift An understanding of continent movement and modern distribution of species allows us to infer when and where different groups evolved 6. Evidence of Evolution - Artificial Selection v Humans have modified other species by selecting and breeding individuals with desired traits from a common ancestor Natural Selection in Response to Introduced Plant Species Soapberry bugs use a “beak” to feed on seeds in fruits In southern Florida soapberry bugs feed on native balloon vine with larger fruit; they have longer beaks v In central Florida they feed on non-native goldenrain tree with smaller fruit; they have shorter beaks v Correlation between fruit size and beak size has also been observed in Louisiana, Oklahoma, and Australia v v 6 11/19/14 Soapberry Bug Evolution Figure 22.13b RESULTS Beak 10 v In all cases, beak size has evolved in populations that feed on introduced plants with fruits that are smaller or larger than the native fruits v These cases are examples of evolution by natural selection v In Florida this evolution in beak size occurred in less than 35 years The Evolution of Drug-Resistant Bacteria v v v v The bacterium Staphylococcus aureus is commonly found on people One strain, methicillin-resistant S. aureus (MRSA) is a dangerous pathogen S. aureus became resistant to penicillin in 1945, two years after it was first widely used S. aureus became resistant to methicillin in 1961, two years after it was first widely used A Different Cause of Resemblance: Convergent Evolution v v v Convergent evolution is the evolution of similar, or analogous, features in distantly related groups Analogous traits arise when groups independently adapt to similar environments in similar ways Convergent evolution does not provide information about ancestry On native species, southern Florida 8 Number of individuals 6 4 2 0 Museum-specimen average 10 On introduced species, central Florida 8 6 4 2 0 6 7 8 9 Beak length (mm) 10 11 The Evolution of Drug-Resistant Bacteria v v v v When exposed to methicillin, MRSA strains are more likely to survive and reproduce than nonresistant S. aureus strains MRSA strains are now resistant to many antibiotics Antibiotic resistance is not a “learned” adaptation; bacteria have short generation times and large population sizes, which increase the rate at which they evolve Drug-resistant bacteria are the result of spontaneous mutation and natural selection Natural Selection: A Summary v v v v v v Individuals with heritable traits that are adaptive to the current environment survive and reproduce at a higher rate than other individuals Over time natural selection increases the adaptation of a population of organisms to their environment If an environment changes over time, natural selection may result in adaptation to these new conditions and may give rise to new species Natural selection does not create new traits, but edits or selects for traits already present in the population The local environment determines which traits will be selected for or selected against in any specific population Evolution can be viewed as both a pattern and a process 7 11/19/14 What Is Theoretical About Darwin’s View of Life? v v v In science, a theory accounts for many observations and data and attempts to explain and integrate a great variety of phenomena Darwin’s theory of evolution by natural selection integrates diverse areas of biological study and stimulates many new research questions Ongoing research adds to our understanding of evolution § Evolutionary biology is an active field- we don’t know everything yet! 8