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NAME ________________________________________ DATE_________________ PERIOD_______ Amino Acid Sequencing Proteins are made of amino acids. DNA determines what sequence these amino acids must be in to build the protein. Scientists can examine the amino acid sequence of particular protein molecules found in vertebrates to determine the degree of similarity between species. Even organisms that appear to have few physical similarities may have similar sequences of amino acids in their proteins and be closely related through evolution. Scientists believe that the greater the similarity in the amino acid sequences (DNA sequences) of two organisms, the more closely related they are in an evolutionary sense. Part A: Cytochrome-c is a protein found in the mitochondria that is used in cellular respiration. This protein consists of a chain of 104 amino acids. The chart below shows the amino acid sequence of nine vertebrates. The letters identify the name of the amino acid. Animal Horse Chicken Tuna Frog Human Shark Turtle Monkey Rabbit A B C D E F G Amino Acid Sequences in Cytochrome-c H I J K L M N O gln pro phe thr thr ala lys asn lys gln glu phe ser thr asp lys asn lys thr gln glu phe ser thr asp lys ser lys val gln ala phe ser thr asp lys asn lys thr gln pro tyr ser thr ala lys asn lys gln gln phe ser thr asp lys ser lys gln glu phe ser thr glu lys asn lys gln pro tyr ser thr ala lys asn lys gln val phe ser thr asp lys asn lys DATA Compare the amino acid sequence of human cytochrome-c with that of the other eight vertebrates. For each vertebrate, count the number of amino acids that differ from those in the human and write the number in the chart to the right. P Q R S T U V glu glu thr leu met glu lys ala thr asn glu gly glu asp thr leu met glu lys ala thr ser lys asn asn asp thr leu met glu ser ala thr ser -- gly glu asp thr leu met glu ser ala cys ser lys ile gly glu asp thr leu met glu lys ala thr asn glu thr gln gln glu thr leu arg ile lys thr ala ala ser thr gly glu asp thr leu met glu asp ala thr ser lys thr gly glu asp thr leu met glu lys ala thr asn glu thr gly glu asp thr leu met glu lys ala thr asn glu thr TABLE 1 lys Number of Amino Acid Differences from Human Cytochrome-c Number Species Differences Human Horse Chicken Tuna Frog Shark Turtle Monkey Rabbit 0 NAME ________________________________________ DATE_________________ PERIOD_______ DATA ANALYSIS 1. Based on the data, list the order in which these vertebrates are related to humans. Place the vertebrates more similar to humans in sequence at from the top. TABLE 2 Similarity Ranking Animal AA Difference Human 0 2. Using the amino acid differences, which organism is most closely related to humans? _____________________________ 3. Using the amino acid differences, which organism is least closely related to humans? _____________________________ 4. A cladogram is a tree-like diagram showing evolutionary relationships. Use the data from Table 2 and fill in the cladogram to show the relationship of these animals compared to the human. Label the location on the cladogram where you would place the common ancestor to all of these animals. 0 5 10 15 5. Number of Amino Acid Differences In the table you completed above, the number listed for the chicken and horse as compared to the human differs by only one. Compare the differences in amino acid sequences between the horse and the chicken. The difference is ____ . Considering both sets of data, can you conclude from this that the horse and the chicken are closely related? _______ Why or why not? _________________________________________________________________________________________________ CONCLUSION: Summarize the concept of amino acid comparisons as they would indicate the possibility/closeness of a common ancestor.