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POST Report March 2013 Stem Cell Research Page 1 Contents 1 1.1 1.2 1.3 Introduction 1.4 1.5 1.6 2 2.1 2.2 2.3 2.4 2.5 2.6 3 Scientific background Regulatory and ethical framework 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 Background Scientific background ‐ Chapter 2 Regulatory and ethical framework ‐ Chapter 3 Scientific advances ‐ Chapter 4 Clinical developments ‐ Chapter 5 General remarks ‐ Chapter 6 Cells and stem cells Sources of stem cells Human embryonic stem cells Adult stem cells Reprogrammed cells Other sources of stem cells 5 5 5 5 Different types of cells Components of cells Stem cells Differentiation and cell fate Early development of the embryo Deriving hES cell lines Testing for pluripotency Different types of adult stem cells Stem cell niches Cell nuclear transfer Interspecies cell nuclear transfer Induced pluripotent stem cells Directly switching cells of one type to another Human embryonic germ cells Parthenogenetic stem cells 5 6 6 7 7 7 7 7 8 8 8 8 8 10 10 10 10 10 10 11 12 12 13 13 13 15 Possible uses of stem cells Regulatory bodies and pathway Ethical review of research Research on human tissue Research involving human embryos Other research regulation Stem cells and clinical trials The Stem Cell Toolkit NHS requirements for REC review Legal requirements for REC review Other requirements for REC review The National Research Ethics Service NHS RECs and clinical trials The Integrated Research Application System (IRAS) UK human tissue legislation The Human Tissue Authority Licensing and inspection Approving donations Embryo research legislation The HFEA and embryo research Care Quality Commission (CQC) NHS research permissions Animal research Genetic modification Stem cells and medicinal products Different types of ATMP ATMPs in clinical trials The centralised procedure 15 15 17 17 17 18 18 19 19 19 19 20 20 21 21 21 22 24 24 24 24 25 25 25 26 26 27 28 POST Report March 2013 Stem Cell Research Page 2 4 4.1 4.2 4.3 4.4 5 5.1 5.2 5.3 6 6.1 6.2 Scientific advances Clinical developments General remarks What makes stem cells different? Factors that control differentiation Directing cell fate in cell culture Reversing differentiation: iPS cells Stem cell therapies Autologous cell therapy trials Allogeneic cell therapy trials Background Regulatory issues Preventing differentiation Emergence of the trophectoderm Differentiation of the inner cell mass Adult stem (AS) cells Cell culture Deriving ES cell lines Culture conditions Reliably maintaining hES cell lines Clinical grade cell lines Stem cell banking Deriving different lineages from stem cells Endoderm Liver cells Beta cells Lung cells Mesoderm Mesenchymal stem (MS) cells Sources of cardiomyocytes Haematopoeitic stem (HS) cells Ectoderm Non‐neural ectoderm Neural crest stem (NCS) cells Directing hES cells to neural lineages The reprogramming process Comparing iPS and ES cells iPS cells in disease modelling Autologous and allogeneic approaches Types of cells used Cell therapy and blood cancers Cell therapy and cardiac function Cell therapy and stroke Cell therapy and immune disorders Other autologous cell therapy approaches Types of cells used Fetal neural stem cells Disorders of the Central Nervous System Stroke hES‐derived cell therapies Spinal cord injury Diseases of the eye Neurodegenerative disease Background DH review of arms length bodies Proposals for a health research agency Establishment of HRA The future of HFEA and HTA Consultation responses Government response Future regulation of stem cell research Review of the Clinical Trials Directive 29 29 29 30 31 31 32 32 32 32 34 34 34 35 36 36 36 36 37 37 37 38 39 40 41 42 42 44 45 46 48 51 51 51 52 52 53 53 54 54 54 55 55 56 56 56 56 56 57 58 59 59 60 60 60 60 60 61 61 63 64 64 POST Report March 2013 Stem Cell Research 6.3 6.4 6.5 A1 A2 Acronyms Glossary Commercialisation Potential benefits and risks of cell therapy Where next? Page 3 Conducting clinical trials in the NHS Patentability of hES cells The European patent system hES cells and the morality provisions Greenpeace versus Bustle The CJEU ruling Implications for patentability Non‐destructive methods Wider implications Current state of UK stem cell research Businesses and business models Businesses Business models Barriers to commercialisation UK life sciences strategy Research, clusters and collaborations Investment and incentives Streamlining regulation People Infrastructure 65 65 65 66 66 66 67 67 67 68 68 68 68 ff 70 70 70 71 72 72 72 73 Acellular products Endogenous repair Cells for screening and testing Cell therapy Autologous cell therapy Allogeneic cell therapy Cell therapy and clinical trials 73 74 74 74 75 76 76 77 78 79 Acknowledgements POST would like to thank all contributors and reviewers, Dr Mara Almeida for her role in researching and writing this report and the Fundação para a Ciência e a Tecnologia (FCT) which funded her fellowship. POST Report March 2013 Stem Cell Research Page 4 Boxes Box 2.1 Box 2.2 Box 3.1 Box 3.2 Box 3.3 Box 3.4 Box 3.5 Box 3.6 Box 3.7 Box 3.8 Box 3.9 Box 3.10 Box 4.1 Box 4.2 Box 4.3 Box 4.4 Box 4.5 Box 4.6 Box 4.7 Box 4.8 Box 5.1 Box 5.2 Box 5.3 Box 5.4 Box 5.5 Box 5.6 Box 5.7 Box 6.1 Box 6.2 Box 6.3 Box 6.4 Differentiation in the early embryo DNA transfer and mitochondrial disease NHS requirements for REC review Composition and operation of RECs The different phases of clinical trials The Human Tissue Act 2004 The Human Tissue (Quality and Safety for Human Application ) Regulations 2007 Principle purposes for embryo research The Animals (Scientific Procedures) Act 1986 The EU Clinical Trials Directive Regulation of medical devices Exemptions to ATMP marketing authorisations Gene expression and epigenetics Transcription factors Directing cell fate Cell culture Autologous and allogeneic therapy Graft versus Host Disease (GVHD) and Graft versus Tumour (GVT) responses Stem cell models for motor neurone disease Reprogramming using small molecules Tissue engineered windpipe Gene therapy for X‐linked SCID Immune rejection Immune privilege Allogeneic cell therapy for venous leg ulcers The London Project to Cure Blindness The NeuroStemcell programme Capacity of CQC to take on new functions Efficiency savings already made by HFEA and HTA Non‐destructive derivation of hES cell lines Tumour stem cell 9 11 17 18 18 20 21 22 25 26 26 27 29 30 30 33 34 35 44 47 51 52 52 55 55 57 58 63 63 67 68 Figures Figure 2.1 Figure 2.2 Figure 2.3 Figure 2.4 Figure 3.1 Figure 4.1 Figure 4.2 Figure 4.3 Figure 4.4 Figure 4.5 Figure 4.6 Figure 6.1 Fertilisation Early stages in the development of the human embryo Deriving NTS cells Deriving PS cells UK regulatory pathway for health research Cell culture Deriving cardiomyocytes The hierarchy of intermediate cell types in blood formation Neural tube formation Steps in reprogramming iPS cells as disease models UK medical biotech pipeline 7 9 11 13 16 33 38 41 40 45 48 70 Tables Table 3.1 Table 3.2 Table 3.3 Table 4.1 Table 4.2 Table 5.1 Table 5.2 Table 6.1 Table 6.2 Human tissue legislation in Scotland and the rest of the UK Activities and organisations licensed by the HTA Research projects licensed by the HFEA between April 2010 and March 2011 Comparison of iPS and ES cells iPS cell disease models Trials of fetal stem cells Trials of hES‐derived cells Summary of proposals to transfer HFEA and HTA functions Companies by location 19 20 23 46 49 56 56 62 69 POST Report March 2013 Stem Cell Research Page 5 1 1 Introduction Introduction 1.1 1.1 Background Background In 2001, In 2001, the the UK UK Parliament Parliament voted voted to permit to permit research research on embryos on embryos for afor number a number of specified of specified therapeutic therapeutic purposes. purposes. In the In the wake wake of this of this debate, debate, the the House House of of Lords Lords established established an ad anhoc ad hoc Select Select Committee Committee to to explore explore the the wider wider issues issues raised raised by stem by stem cell cell research. research. ThisThis Stem Stem CellCell Research Research Committee Committee reported reported in February in February 2002, 2002, making making 27 27 recommendations recommendations to Government. to Government. TheThe necessity necessity of research of research on embryonic on embryonic stem stem (ES)(ES) cellscells waswas a key a key strand strand of the of the Committee’s Committee’s enquiry. enquiry. On the On the oneone hand hand it received it received submissions submissions about about the the scientific scientific andand medical medical benefits benefits thatthat suchsuch research research might might bring. bring. On the On the other, other, it heard it heard evidence evidence suggesting suggesting thatthat research research on ES on cells ES cells waswas bothboth unethical unethical andand unnecessary: unnecessary: unethical unethical because because the the act of actderiving of deriving ES cell ES cell lineslines involves involves the the destruction destruction of embryos; of embryos; andand unnecessary unnecessary because because of advances of advances in research in research using using adult adult stem stem (AS)(AS) cellscells andand the the development development of stem of stem cell cell banks. banks. Overall, Overall, the the Committee Committee considered considered thatthat there there waswas a a strong strong scientific scientific andand medical medical casecase for continued for continued research research on ES on cells. ES cells. It suggested It suggested thatthat keeping keeping bothboth avenues avenues of research of research (on (on ES and ES and AS cells) AS cells) open open would would maximise maximise the the medical medical benefits. benefits. However, However, it recommended it recommended thatthat there there should should be abe a review review “towards “towards the the endend of the of the decade” decade” to evaluate to evaluate whether whether research research on cells on cells derived derived fromfrom embryos embryos 1 1 waswas still still necessary. necessary. Much Much has has changed changed since since the the Stem Stem CellCell Research Research Committee Committee published published its report. its report. For For instance, instance, a a whole whole newnew fieldfield of regenerative of regenerative medicine medicine has has emerged. emerged. It aims It aims to use to use stem stem cellscells and/or and/or other other approaches approaches to regenerate to regenerate diseased diseased or damaged or damaged tissue tissue to restore to restore normal normal function function andand is currently is currently the the subject subject of an ofinquiry an inquiry by the by the House House of Lords of Lords Science Science andand Technology Technology Committee. Committee. ThisThis Report Report presents presents a a summary summary of progress of progress in the in the underlying underlying science science of of stem stem cell cell research research overover the the last last decade. decade. 1 1 Report Report from from the Select the Select Committee Committee on Stem on Stem cell Research, cell Research, House House of of Lords,Lords, HL 83(i), HL 83(i), February February 2002 2002 1.2 1.2 Scientific Scientific Background Background – Chapter – Chapter 2 2 Chapter Chapter 2 provides 2 provides the the science science background background for the for the report. report. It describes It describes whatwhat stem stem cellscells are,are, where where theythey come come fromfrom andand howhow theythey maymay be isolated. be isolated. It It introduces introduces the the processes processes of differentiation of differentiation andand cell cell proliferation proliferation by which by which stem stem cellscells can can multiply multiply andand givegive rise rise to more to more specialised specialised cell cell types. types. It also It also looks looks at the at the various various different different possible possible sources sources of stem of stem cellscells including including human human embryos, embryos, fetalfetal tissue, tissue, adult adult stem stem cellscells andand the the relatively relatively newnew process process by which by which somatic somatic (adult) (adult) cellscells can can be re-programmed be re-programmed to form to form induced induced pluripotent pluripotent stem stem (iPS) (iPS) cells. cells. It describes It describes the the properties properties of cells of cells fromfrom these these sources, sources, focusing focusing in in particular particular on their on their potential potential to give to give rise rise to more to more specialised specialised cell cell types. types. 1.3 1.3 Regulatory Regulatory andand Ethical Ethical Framework Framework – – Chapter Chapter 3 3 Chapter Chapter 3 sets 3 sets out out the the current current regulatory regulatory framework framework for research for research on stem on stem cells. cells. It describes It describes the the regulations regulations under under the the Human Human Fertilisation Fertilisation andand Embryology Embryology Act Act thatthat cover cover research research on embryos on embryos andand those those under under the the Human Human Tissues Tissues Act Act concerning concerning the the derivation, derivation, storage storage andand use use of human of human tissue. tissue. It It looks looks at UK at UK arrangements arrangements for the for the central central banking banking of of cell cell lineslines andand outlines outlines regulations regulations covering covering the the use use of cells of cells in clinical in clinical trials. trials. Chapter Chapter 3 also 3 also looks looks at at various various recent recent proposals proposals for reforming for reforming the the regulation regulation of biomedical of biomedical research. research. 1.4 1.4 Scientific Scientific Advances Advances – Chapter – Chapter 4 4 Chapter Chapter 4 examines 4 examines the the main main scientific scientific advances advances in in basic basic stem stem cell cell research research in recent in recent years. years. It looks It looks at at the the rapidly rapidly moving moving fieldfield of epigenetics: of epigenetics: howhow factors factors in the in the cell cell interact interact withwith DNADNA to control to control which which genes genes are are turned turned on and on and which which are are blocked. blocked. It describes It describes howhow variations variations in these in these signalling signalling pathways pathways determine determine the the fatefate of aof stem a stem cell cell in a in living a living organism; organism; whether whether it turns it turns into into (say) (say) a nerve a nerve cell cell or or a blood a blood cell.cell. AndAnd it examines it examines howhow knowledge knowledge of of suchsuch factors factors can can be used be used to direct to direct the the fatefate of cells of cells in in the the laboratory. laboratory. For For instance, instance, howhow stem stem cellscells can can be be made made to differentiate to differentiate into into specific specific types types of cells, of cells, or or howhow the the process process can can be run be run in reverse in reverse to reprogram to reprogram specialised specialised cellscells into into iPS iPS cells. cells. It describes It describes recent recent evidence evidence on the on the extent extent to which to which iPS iPS cellscells resemble resemble andand behave behave like like ES cells. ES cells. Finally, Finally, it looks it looks at other at other potential potential usesuses of stem of stem cells. cells. These These include include using using stem stem cellscells to model to model andand improve improve understanding understanding of of the the mechanisms mechanisms of diseases, of diseases, andand to aid to in aidthe in the development development andand screening screening of new of new drugs. drugs. Page 6 1.5 Clinical Developments – Chapter 5 Chapter 5 looks at the potential clinical uses for stem cells. It presents details of clinical trials of cellbased therapy that have been conducted since the Stem Cell Research Committee reported. Two main types of clinical approaches are discussed in this Section. The first is use of the patient’s own cells for therapeutic purposes (autologous therapy). The Report gives examples of some of the many, often small scale, trials that have investigated such an approach for treating a range of conditions from heart attacks to stroke. The second is the therapeutic use of cells from another person (allogeneic therapy). Here the Report gives details of the first few clinical trials involving cells derived from hES cells as well as trials using fetal tissuederived cells. POST Report March 2013 Stem Cell Research 1.6 General Remarks – Chapter 6 Chapter 6 wraps up the report, by offering some general remarks about the potential of stem cell research and cell-based therapies. It examines some of the challenges that research in this area may pose for regulators, policy makers and parliamentarians. This includes proposed changes to the regulation of research on human tissue and embryos, the patentability of inventions involving human embryonic stem (hES) cells and reform of the EU legislation regulating clinical research. It also looks at the commercial opportunities presented by stem cell research and at the challenges involved in translating world class science in the laboratory into safe and effective treatments in the clinic. Finally it examines the potential risks and benefits of cell therapy approaches and looks at where the science may be heading in the next ten years or so. POST Report March 2013 Stem Cell Research Page 7 2 2 Scientific Scientific Background Background Overview Overview Cells Cells of the ofearly the early embryo embryo (embryonic (embryonic stemstem cells)cells) havehave the potential the potential to give to give rise to rise alltoofall of the different of found cell found the body are pluripotent). the different typestypes of cell in theinbody (they(they are pluripotent). The process by which thesethese embryonic stemstem cellscells give give rise to more specialised cell types The process by which embryonic rise to more specialised cell types is known as differentiation. is known as differentiation. While ofcells the cells the adult human are highly specialised, While mostmost of the in theinadult human bodybody are highly specialised, somesome adultadult stemstem retain a more limited capacity to give rise to multiple cell types. cellscells retain a more limited capacity to give rise to multiple cell types. Differentiation a one-way process; researchers devised Differentiation is notisanot one-way process; researchers havehave devised waysways of of reprogramming specialised into pluripotent reprogramming specialised adultadult cellscells backback into pluripotent cells.cells. 2.1 Cells 2.1 Cells and stem and stem cellscells Different Different typestypes of cells of cells FIGURE FIGURE 2.1 FERTILISATION 2.1 FERTILISATION More More complex complex organisms organisms such as such humans as humans are made are made up up of many of many cells grouped cells grouped together together in different in different organs organs and and tissues. tissues. Estimates Estimates of theoftotal the number total number of cells of in cells thein the 2 2 human human body body vary from vary around from around 10 trillion 10 trillion to 50 to trillion 50 trillion , , comprising comprising of more of more than 200 thandifferent 200 different typestypes (blood(blood cells, cells, skin cells, skin cells, nervenerve cells, cells, etc.). etc.). StemStem cellscells Figure 2.1 Fertilisation All living All living thingsthings are made are made of oneoforone more or more cells. cells. The The simplest simplest living living organisms organisms are bacteria, are bacteria, whichwhich consist consist of of singlesingle cells. cells. WhenWhen such such organisms organisms encounter encounter favourable favourable conditions conditions − for instance − for instance free availability free availability of water, of water, oxygen oxygen and nutrients and nutrients and an and appropriate an appropriate temperature temperature − they− are they are able to able grow to grow and reproduce and reproduce themselves themselves by a process by a process calledcalled cell division. cell division. All of All theofcells the that cellsmake that make up theuphuman the human body body are are specialised specialised to a greater to a greater or lesser or lesser extent. extent. For instance, For instance, mature mature red blood red blood cells are cellstiny, aredisk-shaped tiny, disk-shaped cells that cellscan that can squeeze squeeze through through the narrowest the narrowest of capillaries of capillaries and and transport transport oxygen oxygen around around the body. the body. In contrast, In contrast, human human nervenerve cells (neurons) cells (neurons) can have can have branches branches (axons) (axons) that are that are more more than athan metre a metre long, long, and specialise and specialise in transmitting in transmitting nervenerve impulses impulses around around the body. the body. Yet both Yet types both types of cells of −cells − alongalong with all with theallother the other cell types cell types in theinbody the body − arose − arose from from just ajust single a single cell: the cell:fertilised the fertilised egg. egg. Components Components of cells of cells Virtually Virtually all of the all ofcells the of cells theofhuman the human body body contain contain a a nucleus. nucleus. The nucleus The nucleus houses houses the cell’s the cell’s genetic genetic information information (DNA)(DNA) in structures in structures knownknown as chromosomes. as chromosomes. The human The human genome genome is splitisacross split across 23 chromosomes. 23 chromosomes. Most Most human human cells carry cells carry two copies two copies (46) of(46) theof the chromosomes. chromosomes. One of One these of these can be can traced be traced back to back theto the mother, mother, one toone thetofather. the father. GermGerm cells, cells, the sperm the sperm and the and the eggs,eggs, carry carry only aonly single a single set (23) setof(23) chromosomes. of chromosomes. WhenWhen a sperm a sperm fertilises fertilises an egg, an the egg,nucleus the nucleus of theoffertilised the fertilised egg egg contains contains the full the 46full chromosomes; 46 chromosomes; 23 from 23 the frommother the mother (egg) (egg) and 23 and from 23 the fromfather the father (sperm); (sperm); see Figure see Figure 1.1. 1.1. 2 2 A trillion Aistrillion a million is a million million or million 1012 or 1012 Any cell Anythat cellhas thatthe haspotential the potential to give torise givetorise other to other typestypes of cellofiscell called is called a stem a stem cell. Stem cell. Stem cells have cells have two defining two defining features: features: continual continual self renewal self renewal to form to more form more stem stem cells cells Fig 2.4 Deriving PS cells the potential the potential to produce to produce one orone more or more typestypes of of specialised specialised (differentiated) (differentiated) cell. cell. In nature, In nature, this process this process of differentiation of differentiation is normally is normally one one way: cells way: tend cells to tend gettoincreasingly get increasingly specialised specialised as as organisms organisms develop. develop. As theAscells the differentiate cells differentiate and become and become more more specialised, specialised, the range the range of celloftypes cell types that they that can they can give rise givetorise − their to − potency their potency − will −diminish. will diminish. Various Various termsterms have have been been coined coined to describe to describe cell potency: cell potency: Totipotent Totipotent stem stem cells are cellsfound are found in theinvery the early very early embryo. embryo. They They have have the potential the potential to develop to develop into ainto a human human beingbeing and can andgive canrise givetorise all the to alldifferent the different cell cell typestypes foundfound in theinhuman the human body body plus those plus those that make that make Figure 3.1 UK regulatory pathway for health research up theupplacenta, the placenta, chorion chorion and the andumbilical the umbilical cord. cord. Pluripotent Pluripotent stem stem cells are cellsfound are found in theinearly the early embryo embryo 5 to 75days to 7 after days fertilisation. after fertilisation. They They have have the potential the potential to develop to develop into allinto thealldifferent the different cell types cell types foundfound in thein the human human body.body. But they But have they have lost the lostpotential the potential to to contribute contribute to tissues to tissues such as such theasplacenta. the placenta. Multipotent Multipotent stem stem cells are cellsfound are found in theindeveloping the developing embryo embryo and on and into onadulthood. into adulthood. They They have have already already partially partially differentiated differentiated into more into more specialised specialised cell cell types.types. They They can give canrise givetorise some to some or all or of all theofcell the cell typestypes associated associated with the withtissues the tissues or organs or organs that they that they are found are found in. Butin.they But have they have lost the lostpotential the potential to form to form cell types cell types from other from other tissues tissues and organs. and organs. Figure 2.3 D POST Report March 2013 Stem Cell Research Page 8 Unipotent stem cells are those that have differentiated to the extent that they give rise to a single type of cell. Differentiation and cell fate So what is the difference between a totipotent cell in the very early embryo and a pluripotent cell found in the same embryo one week later? Or between a pluripotent embryonic cell and a multipotent stem cell found in the developing foetus or taken from an adult? And what is the process by which these cells develop from the early embryonic stem cells? The answer to these questions lies in gene expression. All of the cells in the early embryo carry a complete set of human genes. But not all of the genes are equally active in all tissues at all times. Cells contain mechanisms for turning genes on (expressing them) and off (repressing them) and for modulating the extent of their activity. This means that different genes will be active to different extents in one cell type compared with another. It is the processes that control which genes are promoted and repressed that determine the eventual developmental fate of a stem cell. In recent years, researchers have made great progress in understanding some of these processes (see Chapter 4). This allows cells to be directed down different development pathways (lineages) in the laboratory. For instance: directing differentiation within a particular lineage (for instance using regulatory factors to direct blood stem cells to differentiate into specialised blood cells such as lymphocytes) converting cells of one lineage (e.g. skin stem cells) into cells of another lineage (e.g. neurons) reversing the differentiation process by transforming partially differentiated multipotent cells back into cells that act in a similar manner to pluripotent stem cells. 2.2 Sources of stem cells Human stem cells can be derived in several different ways. They can be: Isolated from the early stages of the human embryo. Such cells are called human embryonic stem (hES) cells. Isolated from various tissues and organs of the human body. These cells are called human adult stem (hAS) cells. Derived by reprogramming other cells. One example is reprogramming the DNA in an adult cell nucleus by transferring it into an egg cell. Another is the reprogramming of somatic3 cells to create induced pluripotent stem (iPS) cells. Other possible approaches involve deriving cells from fetal tissue or using techniques such as parthenogenesis that stimulate eggs to mimic the fertilisation process. 2.3 Human embryonic stem cells Early development of the embryo All of the (human)4 cells found in an adult originate from a single cell: the fertilised egg. Key stages in the development of a human embryo are outlined in Box 2.1. Within a week of fertilisation, multiple cell divisions have resulted in a structure referred to as a blastocyst (see Figure 2.2). It consists of around 200 cells, organised into an inner layer called the inner cell mass and an outer layer called the trophoblast. Cells from the trophoblast will go on to form the placenta and umbilical cord. Those found in the inner cell mass are called human embryonic stem (hES) cells. Within two weeks or so of fertilisation, hES cells in the developing embryo have given rise to three distinct layers of tissue. Each layer contains cells that have taken a committed step down a different differentiation pathway, or lineage. The three lineages (see Box 2.1) are the: endoderm, that will give rise to the specialised cells that line the tissue such as the lungs, alimentary canal and airways (trachea) mesoderm, which will go on to develop into tissues such as bone, cartilage and muscle ectoderm, that will give rise to the nervous system, the sensory organs and structural features such as skin, hair and nails. Deriving hES cell lines The hES cells found in the blastocyst (Box 2.1) are of particular interest because they are a) pluripotent and b) self-replicating. The ability to self-replicate effectively means that the hES cells are immortal; they can be harvested5 and cultured in the laboratory indefinitely as stable hES cell lines under the correct conditions.6 Cell culture is discussed in more detail in Chapter 4. These two properties of hES cells arise because they have the capacity to divide both symmetrically and asymmetrically. Symmetric cell division produces two identical daughter cells with similar properties to the original hES cell. Asymmetric cell division produces two daughter cells, only one of which is similar to the original cell. The other daughter cell is a progenitor cell which will go on to divide and differentiate into a more specialised cell type. Complex signalling pathways control which of these two routes − symmetric or asymmetric cell division − the hES cells take in the developing embryo. 4 5 3 A somatic cell is an adult cell that is not a germ (egg or sperm) cell. 6 The human body contains an estimated ten times as many bacterial cells as human cells. This is possible because bacterial cells are very much smaller than human cells. However this raises ethical issues as it entails destroying the blastocyst. Thomson J et al, Science, 282, 1145–1147, 1998 POST Report March 2013 Stem Cell Research Page 9 Box 2.1. Differentiation in the early embryo Each of the 200 plus specialised cell types in an adult human develop from the early embryonic stem cells by a process known as differentiation, the early stages of which are depicted in Figure 2.2 (below). In the first few days the fertilised egg undergoes a series of cell divisions to form a solid block of cells known as the morula. At this stage no differentiation has occurred; all of the cells are the same and are totipotent because they retain the ability to give rise to all embryonic and extra-embryonic tissues (placenta, chorion and the umbilical cord). By around day 5-7, the first differentiation has occurred, resulting in a structure called the blastocyst (Figure 2.2). It contains two distinct cell types: Cells that initially form an outer layer (the trophoblast) and eventually contribute to the placenta and other extra-embryonic tissue. Cells in the inner cell mass that eventually go on to become the different specialised cell types found in human tissues and organs. It is these cells that can be collected and cultured to form human embryonic stem cell lines. By around day 16, cells from the inner cell mass have undergone further differentiation (see Figure 2.2) and have organised themselves into three distinct layers: An inner layer, the endoderm. These cells differentiate into the cells that line the inner layer of many of the structures in the adult human including the alimentary canal, the lungs, trachea and larynx. A middle layer, the mesoderm. These cells develop into tissues such as bone, cartilage and muscle, as well as providing the lining for blood vessels and urinary tracts. An outer layer, the ectoderm. Cells from this layer differentiate into the outer layer of skin, hair, nails, the tissues of the central nervous system and the sensory organs. FIGURE 2.2 EARLY STAGES IN THE DEVELOPMENT OF THE HUMAN EMBRYO POST Report March 2013 Stem Cell Research Page 10 Testing for pluripotency There are tests that researchers can use to assess whether a given cell line is pluripotent. Pluripotent hES cells have been derived that pass each of the following tests: Injecting the cells into the skin or testes or under the kidney capsule of immune deficient mice. If the mice develop characteristic growths (teratomas) containing differentiating cells from each of the three main lineages − endoderm, mesoderm and ectoderm − then this is taken as indicative that the cell line is pluripotent. Changing the culture conditions to allow the cells to differentiate. If the cells differentiate spontaneously into many cell types derived from all three main lineages, then the cells are likely to be pluripotent. Examining the pattern of genes being expressed in the cells to see if they match those expected from pluripotent cells. The most recent tests check thousands of gene activities against a database of genes known to be active in pluripotent cells.7 Another test for pluripotency that is used in animal studies, but not in humans, is to inject ES cells that have been labelled in some way into a blastocyst of the same species. The ES cell line is pluripotent if it contributes to all tissues in the developing (or adult) recipient. 2.4 Adult stem cells Different types of adult stem cells Many organs in the adult body contain a population of stem cells that serve as sources of cell replacement throughout life. These adult stem (AS) cells are partially differentiated; they have already embarked down a developmental lineage. Under normal circumstances, they only give rise to cell types within their particular lineage. They may be capable of generating several different cell types or just one type of cell. For example: Hematopoietic stem cells can give rise to all the different types of blood cells including red blood cells, B and T lymphocytes, natural killer cells, neutrophils, basophils, eosinophils, monocytes, and macrophages. Epithelial stem cells have been identified in the lining of the digestive tract. They can give rise to the several cell types found in the tract including absorptive cells, goblet cells and enteroendocrine cells. Mesenchymal stem cells can give rise to a variety of cell types including bone, cartilage, fat and connective tissue cells. Neural stem cells in the brain can go on to form each of the three main types of cell found in brain tissue. Skin stem cells have been found in the bottom layer of the epidermis and can give rise to the cells that form the protective skin surface (keratinocytes). Skin stem cells are also found in the base of hair follicles, and can give rise to both the hair follicle and to the epidermis. Stem cell niches The sites in the body where AS cells are located are referred to as stem cell niches. However, a stem cell niche is not just a physical location where stem cells are found; it provides a complete micro-environment for maintaining stem cells in the desired state. This may mean providing an environment where the cells remain in a non-dividing (quiescent) state. But the niche must also respond to signals generated by external events such as natural cell death or tissue injury, to allow the stem cells to regenerate damaged or ageing tissue. The stem cell niche must maintain this delicate balance between inactivity, stem cell renewal and proliferation/ differentiation throughout an organism’s life. Understanding the mechanisms that control this balance is a key focus of research. It may prove to be vital in understanding processes such as cancer/tumour formation and how to use cell therapies to combat human disease. Recent research in this area is summarised in Chapter 4. 2.5 Reprogrammed cells Cell nuclear transfer In 1997, researchers at the Roslin Institute published a paper detailing the reproductive cloning of a sheep using an adult cell.8 The method they used was called somatic cell nuclear transfer and the work followed on from Nobel prize winning research by the British scientist Sir John Gurdon in the late 1950s, who used a similar method to clone frogs.9 It involves removing the nucleus from an egg, and replacing it with a nucleus taken from an adult cell. Factors present in the cytoplasm of the egg reprogram the transferred nucleus and make it behave as if it were part of a newly fertilised egg (see Figure 2.3). In this case, the researchers implanted the resulting ‘embryo’ into the womb of another sheep to produce Dolly. But in principle, the same sort of nuclear transfer can be used to make ‘embryos’ from which ES cell lines can be established. Cells derived in this way are called nuclear transfer stem (NTS) cells. 8 9 7 Müller F et al, Nature Methods, 8, 315–317, 2011 Wilmut I et al, Cloning and Stem Cells, 9(1): 3-7, 2007 Sir John Gurdon and Shinya Yamanaka were jointly awarded the Nobel Prize for their work on reprogramming mature cells into pluripotent cells in 2012 POST Report March 2013 Stem Cell Research FIGURE 2.3 DERIVING NTS CELLS Figure 2.3 Deriving NTS cells Figure 4.1 Cell Culture To date, NTS cells have been derived from a number of animals including mice10, rhesus macaques11 and humans.12 ,13 One factor limiting research in this area is the inefficiency of the reprogramming process. For instance, more than 300 rhesus macaque eggs were used to produce just two NTS cell lines. Cell nuclear transfer also raises ethical considerations. While most of the DNA present in a cell is found in the nucleus, the cytoplasm that surrounds the nucleus also contains small amounts of mitochondrial DNA (mtDNA, UK Medical biotech pipeline see Box 2.2). Figure This6.1means that NTS cells derived from a donated human egg cell would potentially contain DNA from two people: mtDNA from the egg donor nuclear DNA (plus any mtDNA transferred along with the nucleus) from the nucleus donor. Donated human eggs have been used to reprogram adult human fibroblasts to form viable blastocysts (see Box 2.1).14 Furthermore, scientists at Newcastle University have investigated the potential of related transfer techniques to allow women with rare metabolic disorders caused by mutations in their mtDNA to have children unaffected by the disease. This research is outlined in Box 2.2. Interspecies cell nuclear transfer One factor limiting the prospects for developing human NTS cell is the scarcity of donated human eggs. This has led researchers to investigate using eggs from other species to reprogram human nuclei. However, this approach is fraught with ethical difficulties as the resulting cells contain a mixture of human DNA (nuclear DNA and any mtDNA transferred along with the nucleus) and animal DNA (mtDNA from the egg cytoplasm). 15 10 11 12 13 14 15 Munsie M et al, Current Biology 10(16), 989-992, 2000 Byrne J et al, Nature, 450, 497-502, 2007 A South Korean group reported the isolation of human NTS cells in 2004, but the claim was subsequently found to be fraudulent. See Cho M et al, Science, 311, 614-615, 2006 Paull D et al, Nature, published online 19 December 2012 French A et al, Stem Cells, 26 (2), 485-493, 2008 Skene L et al, Cell Stem Cell, 5 (1), 27-30, 2009 Page 11 Box 2.2. DNA transfer and mitochondrial disease Mitochondria are organelles found in the cytoplasm of cells. They perform a number of vital functions. For instance, they are involved in cell signalling, control the cell cycle and differentiation and provide the cell with energy. To perform such functions, mitochondria interact closely with the genes contained in the cell nucleus. While the nucleus contains the overwhelming majority of DNA in a cell (nuclear DNA), the mitochondria also contain short stretches of mitochondrial DNA (mtDNA). Mutations in this mtDNA can cause a range of different mitochondrial disorders, including metabolic and neuromuscular disorders. Nuclear DNA and mtDNA are inherited in different ways. For nuclear DNA, a child inherits two complete copies, one from each parent. For most genetic disorders caused by mutations in nuclear DNA, a child will inherit the disorder only if both parents have (or carry) it. In contrast, mtDNA is inherited solely from the mother. This means that any child born to a mother affected by a mitochondrial disorder will inherit that disorder. Researchers at the University of Newcastle have been investigating DNA transfer methods as a possible way of preventing metabolic diseases being inherited. They have looked at two similar transfer techniques to that outlined in Figure 2.3: Maternal spindle transfer (MST). The chromosomes and associated structures from the mother’s egg are removed and transferred to a (disease-free) donor egg from which the nucleus has already been removed. The reconstituted donor egg is then fertilised with the father’s sperm, and implanted in the mother’s uterus. Pronuclear transfer (PNT). The mother’s egg and a (diseasefree) donor egg are both fertilised with the father’s sperm. Each cell contains two pronuclei, one containing the father’s DNA and the mother’s or donor’s DNA). The pronuclei from the mother’s egg are removed and transferred to the donor egg, from which the pronuclei have already been removed. The resulting embryo is then implanted in the mother’s uterus. Although both techniques are similar to nuclear transfer (Figure 3), they differ from it in one important respect; neither MST nor PNT involve reprogramming of the nuclear DNA. In both cases, any resulting embryo is the product of fertilisation, will be genetically unique, and contain three people’s DNA: the nuclear DNA of the mother the nuclear DNA of the father the mtDNA of the (disease-free) egg donor. Studies in animal models and humans16 have shown that MST and PNT can be used to produce viable blastocysts. One study in rhesus macaques used MST to produce embryos that were implanted and gave rise to the birth of four healthy offspring that were normal after two years. The Human Fertilisation and Embryology Authority (HFEA) convened an expert panel to review evidence on the safety and effectiveness of such methods in February 2011. The panel reported in April 2011 and March 2013 and made recommendations for further research to be conducted before such methods could be considered safe for clinical use.17 The Nuffield Council on Bioethics has considered the ethical issues raised by MST and PNT. It concluded that “provided that the techniques are proved to be safe and effective, and an appropriate level of information and support is offered, it would be ethical for families to use these techniques as treatment”.18 HFEA conducted a public consultation on the use of such techniques in 2012 and reported the results in March 2013.19 16 17 18 19 Craven L et al, Nature, 465 (7294), 82-85, 2010 Scientific review of the safety and efficacy of methods to avoid mitochondrial disease through assisted conception, HFEA 2011.Available at www.hfea.gov.uk/docs/2011-04-18_Mitochondria_review__final_report.PDF Novel techniques for the prevention of mitochondrial DNA disorders: an ethical review, Nuffield Council on Bioethics, 2012 www.hfea.gov.uk/docs/March2013Authority-Paper-Mitochondria.pdf POST Report March 2013 Stem Cell Research Page 12 There is currently only one report of such an interspecies approach being used to generate human stem cell lines. Researchers in Shanghai used rabbit egg cells to reprogram the nuclei of human somatic cells from four donors of different ages (5, 42, 52 and 60 years).20 In each case, the researchers were able to derive NTS cell lines that appeared to be human and have similar properties to hES cells. For instance, they were capable of sustained growth in an undifferentiated state, but could also be induced to give rise to cell types such as neuron and muscle, as well as mixed cell populations from all of the three main lineages. Induced pluripotent stem cells As outlined previously, it is different patterns of gene expression that determine the developmental fate of a cell. Patterns of gene expression are regulated by a range of factors that can interact with DNA. Among the most important of these are the transcription factors that are encoded on the genes in the nucleus of a cell. By comparing patterns of gene expression in (undifferentiated) ES cells with those in differentiated cells in mice, researchers were able to identify 24 genes that were particularly active in the mouse ES cells. They conducted experiments using viruses to transfer and express different combinations of these genes into mouse fibroblasts. They identified a cocktail of four genes that, when transferred to fibroblasts, reverted the cells back into undifferentiated, pluripotent, ES-like cells.21 Such cells are known as induced pluripotent stem (iPS) cells. The four factors in question were all genes coding for transcription factors. This cocktail of four reprogramming factors has subsequently been shown to produce iPS cells from a wide range of different types of cells and from cells of different species, including humans.22 More recent research suggests that at least two of the factors can be left out or substituted by other transcription factors or in some cases by small molecules. As discussed in more detail in Chapter 4, research is underway to examine the extent to which human iPS cells behave like human ES cells and to find ways of deriving iPS cells that do not involve gene transfer. Directly switching cells of one type to another Directly switching cells of one lineage to cells of another lineage is called trans-differentiation. Each of the reprogramming approaches described thus far aims to produce fully pluripotent reprogrammed cells. In contrast, trans-differentiation aims to convert differentiated cells of one type into differentiated cells of another without going through a pluripotent intermediate stage. Trans-differentiation has long been known to occur naturally in invertebrates. For instance, jellyfish striated muscle can give rise to a wide range of (jellyfish) tissue types in the laboratory, including functional organs such as tentacles.23 Examples of trans-differentiation are also known to occur in vertebrates, but are less common and more restricted in their scope. For example, experiments in animals have shown that pancreas cells can give rise to liver cells and vice versa (the liver and pancreas both arise from the same region of the endoderm). 24 More recently, a similar approach to that used to derive iPS cells has been employed to convert mouse fibroblasts directly into neurons (nerve cells). Researchers identified a series of transcription factors that are active in neurons. They found that transferring the genes coding for three of these factors into fibroblasts converted them into neurons.25 After a few days, the cells began to behave like neurons, eventually producing electrical signals and forming connections with each other in culture. More recently, researchers have managed to use similar methods to directly convert human donor fibroblasts into neuron-like cells that produce the neurotransmitter dopamine. 26 Two groups of researchers have recently shown that noncardiomyocyte mouse cells can be reprogrammed directly into cardiomyocytes using transcription factors. One group achieved this in the laboratory27, while the other did so in the intact mouse in a clinically relevant model of injury.28 23 24 25 20 21 22 Chen Y et al, Cell Research, 13: 251-263, 2003 Takahashi K and Yamanaka S, Cell 126 (4), 663–76, 2006 Takahashi K et al, Cell 131(5), 861-72, 2007 26 27 28 Shen C-N et al, Organogenesis, 1 (2), 36 – 44, 2004 Shen C-N et al, Mechanisms of Development, 120 (1),107-16, 2003 Vierbuchen T et al, Nature 463, 1035-1041, 2010 Liu X et al, Cell Res, 22 (2), 321–332, 2012 Song K et al, Nature, 485, 599–604, 2012 Qian L et al, Nature, 485 (7400), 593-8, 2012 POST Report March 2013 Stem Cell Research 2.6 Other sources of stem cells Human embryonic germ cells In 1998, the same year that the first hES cell lines were reported, a group of researchers established human cell lines derived from fetal tissue.29 They isolated primordial germ cells − the cells that will form the eggs or sperm of the adult − from 5-9 week old fetuses, and grew them in cell culture with various growth/regulatory factors. The researchers called the cell lines they had derived human embryonic germ (hEG) cells. Whether or not these hEG cells are pluripotent has been the subject of some debate. On the one hand, after one to three weeks in culture, some of the cells spontaneously formed embryoid bodies in the cultured colonies. These are disorganised clumps of cells that have started to differentiate into various cell types. When the researchers analysed the different cell types found in these bodies, they discovered cells from each of the three main lineages. On the other hand, when the hEG cells were injected into immune deficient mice, it was not possible to demonstrate pluripotency by generating teratomas containing differentiating cells from each of the three main lineages. The pattern of gene expression found in hEG cells is also different from that found in pluripotent cells.30 Overall, the hEG cells ‘fail’ two of the three main tests for pluripotency outlined previously. It appears that hEG cells are capable of giving rise to multiple cell lineages, but are unlikely to be truly pluripotent. The primordial germ cells from which hEG cells are derived are specialised cells that are destined to develop into sperm or egg cells. The fact that they have become multipotent suggests that the culture conditions may have triggered a reprogramming process of some sort. Parthenogenetic stem cells Germ cells − eggs and sperm − each contain just a single set of chromosomes. While this is true for sperm, it is not strictly accurate for eggs. The nucleus of the egg contains a single set of (23) chromosomes, but the egg cell also harbours a second set of chromosomes in a residual body called the polar body. This is a relic from the cell division that led to the formation of the egg; it is usually expelled from the egg when fertilisation occurs. Page 13 FIGURE 2.4 DERIVING PS CELLS Fig 2.4 Deriving PS cells In parthenogenesis, mammalian eggs are stimulated to mimic the fertilisation process. At the same time the egg cell is treated with chemicals to prevent expulsion of the polar body. If the polar body fuses with the egg nucleus, the result is an egg cell with a single nucleus containing two sets (46) of maternal chromosomes. Adjusting the conditions to allow normal cell division can result in cells called parthenogenetic stem (PS) cells. Figure 2.4 shows how the process works. Figure 3.1 UK regulatory pathway for health research PS cells have been derived in a range of mammalian species including mice, pigs, rabbits, primates31 and humans.32 In none of the mammals studied so far have the PS cells gone on to develop normally. In each case, researchers have seen arrested development, usually within two weeks. This is thought to be due to the imprinting − patterns of chemical modification − of the DNA and its associated proteins. It is known that the imprinting patterns of the paternal genome present in sperm and the maternal genome in the egg are different. It appears that both paternal and maternal imprints are required for normal development. Despite the fact that “embryos” produced by parthenogenesis do not develop normally, stem cell lines derived from them resemble ES cell lines. For instance, in monkeys, the extracted stem cells look and behave like monkey ES cells, and express ES cell markers. They have been cultured in the laboratory in an undifferentiated state and differentiated into a range of different cell types. 31 Shamblott M et al, Proc Natl Acad Sci USA, A 95, 13726–13731, 1998 30 Shamblott M et al, Proc Natl Acad Sci USA, 98, 113–118, 2001 29 32 Hipp J and Atala A, Journal of Experimental & Clinical Assisted Reproduction, 1, 3, 2004 Revazova E et al, Cloning and Stem Cells, 9 (3), 432–49, 2007 POST Report March 2013 Stem Cell Research Page 14 Several different human PS cell lines have been reported. They have been partially characterised, and share many features in common with hES cell lines. For example they express typical hES markers, and have the ability to form teratomas containing various cell lines from each of the three main lineages. However, because of their different parentage − containing two copies of the maternally imprinted genome − there are inevitable differences between human PS and ES cells. For instance, expression of paternally associated genes has been shown to be absent while that of maternally associated genes is doubled.33 33 Cheng L, Cell Research, 18, 215–217, 2008 A final property of human PS cells that may be of value is their immunology. An individual’s immunological profile is dictated by a complex set of proteins known as the MHC34, encoded on chromosome 6 of the human genome. In the course of normal fertilisation, the fertilised egg receives two copies of the MHC: one from the mother and one from the father. These recombine shortly after fertilisation to give the resulting cells their own immunological profile, which will be different from that of either parent. In human PS cells, both copies of the MHC come from the mother. Hence, the resulting PS cells will have an immunological profile that is much more similar to that of the mother. PS cells may thus represent a way of generating cell lines with predictable immunological properties for the purposes of stem cell banking and tissue matching. 34 MHC stands for Major Histocompatibility Complex POST Report March 2013 Stem Cell Research Page 15 3 3 Regulatory Regulatory and and Ethical Ethical Framework Framework Overview Overview The The regulation regulation of stem of stem cell research cell research fromfrom the laboratory the laboratory to the to clinic the clinic is complex is complex and and involves researchers dealing many different agencies. involves researchers dealing withwith many different agencies. Recent years havehave seenseen some moves towards streamlining regulation in this areaarea but but Recent years some moves towards streamlining regulation in this is scope for further progress. therethere is scope for further progress. The Government established the Health Research Authority (HRA) to co-ordinate The Government has has established the Health Research Authority (HRA) to co-ordinate streamline the regulation of health research. and and streamline the regulation of health research. HRA taken on responsibility for National the National Research Ethics Service HRA has has taken on responsibility for the Research Ethics Service and and the the Integrated Research Application System. Integrated Research Application System. 3.1 Possible usesuses of stem cellscells 3.1 Possible of stem StemStem cell research cell research aims aims to develop to develop betterbetter treatments treatments for for a range a range of diseases of diseases (see (see Chapter Chapter 5). This 5). may This occur may occur in in several several ways.ways. For instance, For instance, new cell-based new cell-based therapies therapies are are beingbeing developed developed for treating for treating chronic chronic degenerative degenerative diseases diseases such such as Alzheimer’s, as Alzheimer’s, diabetes diabetes and liver and liver cirrhosis. cirrhosis. OtherOther typestypes of stem of stem cells cells − most − most notably notably mesenchymal mesenchymal stemstem cells cells − are−ofare interest of interest because because of their of their suppressive suppressive effects effects on the onimmune the immune system. system. TheyThey are are beingbeing investigated investigated as the asbasis the basis of therapies of therapies for for minimising minimising the damage the damage caused caused by acute by acute events events such such as as heartheart attacks attacks and stroke. and stroke. StemStem cells cells can also can be also used be used as components as components in other in other constructs constructs to create to create devices devices or other or other functional functional or or structural structural tissues. tissues. Examples Examples here here mightmight include include artificial artificial skin made skin made from from fibroblasts fibroblasts in a supporting in a supporting matrix, matrix, the use the use of stems of stems cells cells to reconstruct to reconstruct tissues tissues such such as the astrachea, the trachea, or theordevelopment the development of biomaterials of biomaterials containing containing growth growth factors factors to stimulate to stimulate bonebone stemstem cells cells in theintreatment the treatment of of fractures. fractures. In addition In addition to being to being usedused directly directly in cell-based in cell-based therapies, therapies, stemstem cells cells can also can deliver also deliver betterbetter treatments treatments for disease for disease through through indirect indirect means means (see (see Chapter Chapter 4). For 4).instance, For instance, researchers researchers can now can derive now derive iPS cell iPSlines cell lines from from individuals individuals suffering suffering from from a specific a specific disease. disease. These These disease-specific disease-specific iPS cells iPS cells can be can used be used as models as models to study to study detailed detailed characteristics characteristics of diseases of diseases such such as Duchenne as Duchenne Muscular Muscular 35 35 Dystrophy. Dystrophy. They They can also can be also used be used to screen to screen the the effectiveness effectiveness and toxicity and toxicity of potential of potential new drugs. new drugs. hES hES cells cells are also are useful also useful as disease as disease models models and are andbeing are being usedused to test topotential test potential new drugs new drugs for toxic for toxic side effects side effects across across a wide a wide rangerange of celloftypes. cell types. hES cells hES cells also offer also offer a a unique unique model model in which in which to study to study earlyearly human human development development and stem and stem cell research cell research is delivering is delivering improved improved understanding understanding of basic of basic cell processes cell processes such such as as differentiation, differentiation, division, division, cell death, cell death, etc. This etc. knowledge This knowledge couldcould lead to lead new to targets new targets for drug for drug design. design. 35 Wu35SMWu andSM Hochedlinger and Hochedlinger K, Nature K, Nature Cell Biology, Cell Biology, 13, 497–505, 13, 497–505, 2011 2011 3.2 3.2 Regulatory Regulatory bodies bodies and and pathway pathway SuchSuch activities activities cut across cut across a wide a wide rangerange of regulatory of regulatory areas. areas. For instance, For instance, Figure Figure 3.1 shows 3.1 shows the main the main approvals approvals that may that be may needed be needed to conduct to conduct clinical clinical trials trials involving involving stemstem cells cells in theinUK. theThey UK. They include include regulations regulations covering: covering: The ethical The ethical review review of research of research involving involving human human subjects subjects through through the NHS the NHS National National Research Research Ethics Ethics Service Service (NRES). (NRES). NRES NRES is now is part now of part theofnew the Health new Health Research Research Authority Authority (HRA). (HRA). Research Research on human on human tissuetissue currently currently overseen overseen by the by the Human Human Tissue Tissue Authority Authority (HTA). (HTA). Research Research involving involving human human embryos, embryos, regulated regulated by by the Human the Human Fertilisation Fertilisation and Embryology and Embryology Authority Authority (HFEA). (HFEA). Other Other research research areasareas such such as work as work involving involving genetic genetic modification modification (overseen (overseen by the byHealth the Health and Safety and Safety Executive; Executive; HSE)HSE) or animal or animal research research (Home (Home Office; Office; HO). HO). The marketing The marketing of new of therapies new therapies and the andconduct the conduct of of clinical clinical trials trials in humans in humans (regulated (regulated by the byMHRA the MHRA and and 36 the EMA the 36 EMA depending depending on the onnature the nature of theof the therapeutic therapeutic product). product). This includes This includes the need the need to obtain to obtain research research permissions permissions from from all of all theofNHS the NHS truststrusts involved involved in clinical in clinical trials.trials. In December In December 2011,2011, the Government the Government established established the HRA the HRA as a Special as a Special Health Health Authority Authority (SHA). (SHA). Its purpose Its purpose is to is to protect protect and promote and promote the interests the interests of patients of patients and the and the publicpublic in health in health research. research. It willItalso will work also work to combine to combine and and streamline streamline the current the current approval approval system system and promote and promote a a consistent consistent and proportionate and proportionate approach approach to regulation. to regulation. An An explicit explicit goal is goal to reduce is to reduce the regulatory the regulatory burden burden on on 37 37 businesses, businesses, universities universities and the andNHS. the NHS. 36 37 36 MHRA MHRA is the Medicines is the Medicines and Healthcare and Healthcare products products Regulatory Regulatory AgencyAgency and and EMA isEMA the European is the European Medicines Medicines AgencyAgency 37 www.dh.gov.uk/health/2011/12/creation-hra/ www.dh.gov.uk/health/2011/12/creation-hra/ Page 16 POST Report March 2013 Stem Cell Research FIGURE 3.1 UK REGULATORY PATHWAY OF CLINICAL TRIALS INVOLVING STEM CELLS Figure 3.1 UK regulatory pathway for health research Key IRAS is the Integrated Research Application System NRES is the NHS National Ethics Service HFEA is the Human Fertilisation and Embryology Authority HTA is the Human Tissue Authority HO is the Home Office HSE is the Health and Safety Executive MHRA is the Medicines and Healthcare products Regulatory Agency NIHR is the National Institute for Health Research Figure POST Report March 2013 Stem Cell Research 3.3 Ethical review of research Research may involve an element of risk to those participating in it. For instance, a new therapy may have unforeseen side-effects that only become apparent once it has been given to large number of people. Research may also involve additional burdens or intrusions such as the taking of blood tests or other measurements or the collection of detailed personal information. The purpose of ethical review is to protect people taking part in research. Before starting a proposed research project, researchers must satisfy a research ethics committee (REC) that their research will be ethical and worthwhile. The committee will weigh any expected benefits (to the participants or more widely to society) against any anticipated risks or intrusions. It will only approve the proposed research if it is satisfied that the researchers have minimised the risks and intrusions to participants and that these are outweighed by the potential benefits of the research. There are a number of different requirements for ethical review of research proposals. These include governance of research in the NHS, legal requirements and various other institutional or funding requirements for REC review of research proposals. NHS requirements for REC review Requirements for ethical review of research in the NHS are laid down by the Department of Health (DH). Details of these requirements are outlined in Box 3.1. Broadly speaking, GAfREC requires REC review of all research proposals involving: NHS patients, facilities or staff (see Box 3.1) tissue or information from NHS patients xenotransplantation (putting into people living cells, tissue or organs taken from an animal) health-related research involving prisoners or social care research funded by the DH. Legal requirements for REC review In addition to the requirements summarised in GAfREC, there are other pieces of legislation that may require research proposals to be reviewed by a REC. There is a large amount of overlap between many of the legal approvals required for stem cell research and the research ethics review process. Page 17 Box 3.1 NHS requirements for REC review For research in the NHS, the Department of Health (DH) has published a new (harmonised) edition of its governance arrangements for research ethics committees (GAfREC)38 that came into force in September 2011. The document covers the following services provided by the four UK Health Departments: NHS and adult social care provided by the DH in England NHS and social care provided by the Department of Health and Social Services in Wales NHS care provided by the Scottish Government Health Directorates in Scotland Health and social care provided by the Department of Health, Social Services and Public Safety in Northern Ireland. GAfREC requires all research proposals to be the subject of a REC review if they involve: participants who have been recruited because of their use of any of the services outlined above; this includes all NHS patients and also applies to the recruitment into clinical trials of NHS patients as healthy (untreated) controls participants who have been recruited because they are related to, or are a carer of, an existing or past user of one of the services outlined above the collection of tissue (any material consisting of or including human cells) or information from users of these services use of previously collected tissue or information from which individual past or present users of these services could be identified. xenotransplantation (putting into people living cells, tissue or organs taken from an animal). health-related research involving prisoners or social care research funded by the DH. Requirements potentially relevant to stem cell research include research involving: exposing people to ionising radiation processing of confidential patient information without consent where this would breach confidentiality material consisting of human cells taken from the living or dead. certain medical devices (those not conforming to EU directives or devices that have been modified) potential new drugs (these are known as investigational medicinal products) people who lack (or lose) the capacity to consent to taking part in research protected information from the HFEA register. 38 www.dh.gov.uk/prod_consum_dh/groups/dh_digitalassets/ documents/digitalasset/dh_126614.pdf Page 18 Other requirements for REC review Outside of the NHS and legal requirements, there may be other requirements for REC review of research. For instance, clinical trials involving gene therapy or stem cells used to require approval from the Gene Therapy Advisory Committee (GTAC). However, GTAC ceased to operate in November 2012 and its responsibilities have been subsumed into the NRES system (see below). Guidance published by research funders such as the Medical Research Council (MRC)39 and the Wellcome Trust40 may also require research proposals to obtain a positive research ethics review as a condition of funding. In addition, many research institutions and universities have published guidance on good research practice that requires research proposals involving human subjects to be reviewed by a REC. Many universities and other research institutes also have institutional RECs that consider research proposals for research involving human subjects. The activities of and processes used by such bodies are co-ordinated through the Association of Research Ethics Committees. The National Research Ethics Service The National Research Ethics Service (NRES) provides ethical guidance, training and management support to NHS RECs, and runs a quality assurance programme. Between April 2010 and March 2011 all UK committees considered 7,072 applications for ethical review of research proposals. NRES was transferred to the newly formed Health Research Authority in December 2011. The move paves the way to NRES completing service improvements, such as UK-wide electronic submission through the Integrated Research Application System (see next page). RECs must be independent and impartial, and adopt standard operating procedures to ensure that they operate in an efficient and timely manner. GAfREC stipulates requirements for the composition of NHS RECs and how they operate (see Box 3.2). 39 40 www.mrc.ac.uk/Ourresearch/Ethicsresearchguidance/index.htm www.wellcome.ac.uk/About-us/Policy/Policy-and-positionstatements/WTD002753.htm POST Report March 2013 Stem Cell Research Box 3.2 Composition and operation of RECs GAfREC specifies that NHS RECs should have between 7 and 18 members. It notes that committees should contain a mix of expert and lay members, with the lay members comprising at least one third of the total membership. Expert members are needed to ensure that the committee has the methodological and ethical expertise needed to make decisions about research proposals. Lay members are defined as people who are independent of care services. At least half of the lay membership must be people who have never been care professionals or worked in care services. All REC members are unpaid volunteers, although members will usually receive expenses for attending meetings or conducting other committee business. RECs do not charge researchers for their services; the costs of ethical review are met by the organisation that constituted the REC in question. Costs for NHS RECs are met out of the NRES budget (£10.1 million in 2010). Box 3.3 The different phases of clinical trials New clinical interventions must be tested in clinical trials before they can be marketed or introduced into practice. The phrase clinical intervention covers a wide range of territory: drugs, vaccines, cell therapies, medical devices, surgical procedures, psychological therapies and diagnostic/screening procedures are just some examples. Clinical trials are split into different phases: Phase I. The treatment is tried out in small numbers of people. For drugs these are usually healthy volunteers. The aim is to see how the body metabolises the drug and how it tolerates different doses. For most types of cell therapy and all gene therapy, the treatments are received by small numbers of individuals affected by the disease in question. Phase II. The treatment is given to small numbers of people who are affected by the disease in question. The aim of this phase is to see whether the treatment is effective and if so, what the optimal dose for treatment might be. Phase III. The treatment is given to large numbers of patients with the condition in question, to determine whether it is safe and effective. Because this may involve recruiting thousands of patients suffering from a particular condition, phase III trials are typically multi-centre, time consuming and expensive to conduct. Evidence from the different phases will be passed on to the appropriate regulatory body which assesses safety, efficacy and whether the treatment can be manufactured to appropriate quality standards. If the regulatory body gives the go-ahead for marketing a fourth phase follows: Phase IV. Information is collected about the longer-term risks and benefits of the treatment. This is necessary to pick up rare adverse reactions or side effects, and to finetune guidance on which patients will benefit most. POST Report March 2013 Stem Cell Research NHS RECs and clinical trials One of the functions of NHS RECs is to consider applications for clinical research (see Box 3.3 for an overview of the clinical trials process). Up to November 2012, all applications involving gene or cell therapy were considered by GTAC. From December 2012, GTAC has been subsumed into the NRES system. Its responsibilities have been shared between three existing RECs in West London, Oxford and York. The MHRA Clinical Trials Advisory Group provides advice on first-time-in-man studies and clinical trials involving other novel approaches, including cell therapy. In practice, applications to conduct clinical trials involving cell therapy thus need to be submitted to one of the GTAC RECs and to the MHRA Clinical Trials Advisory Group. Before the introduction of the Clinical Trials Directive in UK law − as the Medicines for Human Use (Clinical Trials) Regulations − in 2004, there was no specified timeframe for completing an ethical review. The clinical trials regulations introduced a 60 day41 time limit for RECs to deliver an opinion on proposed research and this has been adopted as a permissible maximum by all the different types of RECs. Indeed, NRES guidance on standard operating procedures for RECs states that the operational target should be to deliver an opinion within 40 days of a valid claim being received.42 Overall, the ethical review process has been streamlined and speeded up in recent years. The introduction of the integrated research application system has also made it easier for researchers to use. A review of the regulation and governance of health research highlighted the need for proportionate ethical review and consistency of decision making between RECs as being two key areas where there may still be room for improvement. The Integrated Research Application System (IRAS) IRAS is a web-based system that provides a single point of entry for applying for the permissions and approvals for health research in the UK. It allows researchers to enter details of their project on a single form, rather than duplicating the information in separate application forms. 41 42 90 days for gene therapy, cell therapy or for trials involving genetically modified organisms (180 days if a specialist body is consulted). Also, for trials involving cell therapy using non-human cells, there is no specified time limit. www.nres.npsa.nhs.uk/news-andpublications/publications/standard-operating-procedures/ Page 19 IRAS was originally developed by NRES, the UK Clinical Research Collaboration partners and the UK Health Departments. Since its launch in January 2008, functions have been added to IRAS to increase the number of regulatory bodies that the system can interface with. By using filters, a single set of information entered by a researcher can be presented in multiple formats to be compatible with the requirements of a wide range of assessments, including: NRES Administration of Radioactive Substances Advisory Committee Ministry of Justice MHRA Ethics and Confidentiality Committee of the National Information Governance Board NHS R&D permissions. 3.4 Research on human tissue UK human tissue legislation Regulation of research involving human tissue varies between Scotland and the rest of the UK. There are two main laws: the Human Tissue (Scotland) Act 2006 that applies in Scotland, and the Human Tissue Act 2004 that applies in England, Wales and Northern Ireland. Table 3.2 summarises key features of each. Perhaps the biggest difference between the two laws is than in Scotland, the law seeks solely to regulate the removal, storage and use of human material from the deceased. It does not regulate the use of human tissue from living donors for research purposes (Table 3.1). Table 3.1 Features of human tissue legislation in Scotland (right) and the rest of the UK (left) Human Tissue Act Human Tissue 2004 (Scotland) Act 2006 43 Applies in England, Wales & Scotland Underlying principle Legal framework covers 43 Northern Ireland Consent Removal, storage & use of human organs, tissue & cells from the dead Storage & use of human organs & tissue from the living HTA regulates the storage of tissue samples for research purposes Authorisation Removal, storage & use of human organs, tissue & cells from the dead Note that one part of the Human Tissue Act 2004, that relating to non-consensual analysis of DNA (section 45 and schedule 4), applies throughout the UK. POST Report March 2013 Stem Cell Research Page 20 Box 3.4 The Human Tissue Act 2004 Relevant material The Act regulates retention and use of ‘relevant material’ and defines it as material that has come from the human body and that consists of, or may contain, human cells. Several human tissues are specifically excluded from the Human Tissue Act. These include gametes and embryos (which were already regulated by the HFEA), cell lines which are regulated by the Human Tissue (Quality and Safety for Human Application) Regulations 2007 and hair and nails taken from living people. Despite these exclusions, relevant material covers a very wide range of human tissue. Scheduled purposes The Act lists ‘scheduled purposes’ for which consent is required. From the point of view of stem cell research the most relevant of these are research on human tissue and using human tissue to treat patients. Other scheduled purposes listed in the Act include teaching about or studying the human body, carrying out post-mortem examinations and displaying human bodies or tissue in public. Appropriate consent The Act identifies those people who can give appropriate consent for the lawful retention or use of human tissue for scheduled purposes. These include: a living competent adult, or competent child for the retention/use of their tissue a person with parental responsibility for a child for the use/retention of the child’s tissue consent prior to death for the use/retention of tissue from a dead adult, or failing that the consent of a nominated representative or of a qualifying relative consent procedures for those lacking the capacity to give consent are covered by separate regulations. Exceptions The Act provides for a number of exceptions to the general rule that consent is required. Broadly speaking these are: the use of existing holdings (material already in storage before the Act came into force) surplus or residual tissue from diagnostic or surgical procedures for clinical audit, education, performance assessment, public health monitoring or quality assurance purposes residual tissue for research provided the research has been approved by a REC. Under the terms of the Human Tissue (Scotland) Act 2006 authorisation for a hospital post-mortem examination is required from an adult or mature child prior to their death. Failing that, authorisation should be obtained from a nominee of the dead person, or their nearest relative. Tissue samples no longer required for official purposes can be retained and used without authorisation for diagnostic and audit purposes. However, authorisation is required for use of such tissue for education, training or research. In the rest of the UK, the Human Tissue Act 2004 requires consent for the lawful retention and use of body parts from the living or the dead for scheduled purposes (see Box 3.4). Consent is also required for the removal of human material from the dead.44 The Act details what constitutes appropriate consent and who can give it, and outlines certain exceptions where the general requirement for consent may be waived (see Box 3.4). Finally, the Act contains a definition of ‘relevant material’ for which consent is required. The Human Tissue Authority The HTA has two main areas of responsibility: licensing and inspecting organisations that store and use human tissue approving donations of organs and bone marrow from living people. The Future of HTA was the subject of a DH consultation between June and September 2012. Two of the three proposals in the consultation proposed to abolish HTA and transfer its functions elsewhere. This is discussed in more detail in chapter 6. Licensing and inspection As summarised in Table 3.2, the HTA licenses organisations that store and use human tissue under two main pieces of legislation: The Human Tissue Act 2004 (Box 3.4). The Human Tissue (Quality and Safety for Human Application) Regulations 2007 (Box 3.5), referred to as the Q&S Regulations. Table 3.2 Activities and organisations licensed by the HTA Activity Licensed under Organisations licensed45 Tissue & cells for patient treatment Post‐mortem examination Research Anatomy Public display 44 45 Quality & Safety Regulations 2007 (Box 5) Human Tissue Act 2004 Human Tissue Act 2004 Human Tissue Act 2004 Human Tissue Act 2004 181 205 136 35 13 Consent for removing human material from living donors is required by common law. As of 4th July 2011. Source www.hta.gov.uk/ licensingandinspections/licensedestablishments.cfm POST Report March 2013 Stem Cell Research The Human Tissue Act requires all organisations in England, Wales and Northern Island that store and use human tissue for scheduled purposes to be licensed (see Box 3.4). This includes pathology services, anatomy schools, establishments that carry out anatomical examination and post-mortem examination, research organisations and museums that display human tissue. The Q&S Regulations (Box 3.5) are designed to ensure that human tissue used to treat patients is safe and of high quality. It covers the procurement, testing, processing, storage, distribution, import and export of human tissues and/or cells intended for human application. All organisations throughout the UK (including Scotland) involved in such activities must be licensed by HTA. An organisation wishing to conduct one or more of the activities outlined in Table 3.2 must apply to HTA for a licence. It must provide information about the intended activity and appoint a Designated Individual who is responsible for ensuring that: other people to whom the licence applies are suitable to participate in the licensed activity suitable practices are used in the course of carrying out the activity and users comply with the conditions of the licence. Once HTA receives an application it will consider the information provided. It may seek further information from the applicant via email or phone. HTA considers the information provided and may decide to grant a licence, grant a licence with additional conditions attached, or refuse the licence. Over the course of a licence, HTA may seek further information from the licence holder to check that the licensing standards continue to be met. It also conducts on-site inspections of those establishments considered to be at highest risk of not meeting the licensing requirements. Approving donations Under the terms of the Human Tissue Act 2004, the HTA assesses all proposed transplants involving: organs donated by living donors bone marrow or peripheral blood stem cells from adults who lack the capacity to consent or children who lack the competence to consent. Page 21 Box 3.5 The Human Tissue (Quality and Safety for Human Application) Regulations 2007 The Quality and Safety (Q&S) Regulations implement the EU Tissue and Cells Directive into UK law. The aim of the Directive is to set a common standard across the EU for activities using human tissues and cells to make sure that tissue is safe and of high quality. It also allows tissue and cells to be traced from donors to recipients and moved easily between European countries. The Q&S Regulations implement the Directive throughout the UK, including Scotland. Under the terms of the Regulations the HTA is responsible for licensing organisations that remove, store, test, process, use or distribute human tissue or cells that will be used to treat patients. Examples include: collecting umbilical cord blood in maternity units isolation and culture of human cell lines for therapeutic purposes storing corneas in eye banks processing cartilage for repairing knee injuries. Potential organ donors are interviewed by independent assessors (IAs). IAs are accredited by HTA and are usually based in hospital transplant units. They act as a representative of the donor and HTA in order to help the HTA ensure the requirements of the Human Tissue Act 2004 have been met. Following the interview, the IA submits a report to HTA which then decides whether to approve the proposed donation. All potential donations of bone marrow or peripheral blood stem cells from those unable to give consent are assessed by accredited assessors (AAs). Once the AA has assessed a potential donation, they report to the HTA which decides whether to approve it. 3.5 Research involving human embryos Embryo research legislation Research involving human embryos is regulated under the Human Fertilisation and Embryology (HFE) Act. The Act was passed in 1990 to regulate all uses of human embryos outside of the body and to provide the statutory basis for the Human Fertilisation and Embryology Authority (HFEA). It allows research on human embryos, but only under licence, and only for certain purposes specified in the Act. The Act prohibits the granting of a licence that allows the keeping or use of an embryo for more than 14 days. POST Report March 2013 Stem Cell Research Page 22 The purposes listed in the 1990 Act were mainly concerned with licensing research on infertility, miscarriage and contraception. The Act was amended in 2001 to extend the allowable reasons for embryo research to include therapeutic purposes. In practice this allowed the HFEA to licence research it deemed necessary or desirable on ES cells and on techniques such as cell nuclear replacement. The passing of the HFE Act 2008, represented a major review of the legislation, updating and amending the 1990 Act. This further clarified the scope of legitimate embryo research activities, including regulation of ‘human admixed embryos’ (embryos combining both human and animal material). Box 3.6 outlines the principle purposes for which the HFEA can licence research involving embryos. Examples of recent research projects licensed by the HFEA are shown in Table 3.3. It is important to note that an HFEA licence is only required by researchers whose research actually involves human embryos. An HFEA licence is not required to conduct research on existing human cell lines − for instance from a stem cell bank − that were originally derived from embryos. In addition to the statutory controls in Box 3.6, the use of stem cells in research is monitored by the UK Stem Cell Bank Steering Committee. The committee reviews all applications to deposit and access hES cells and monitors the use of fetal and adult stem cells. This review and monitoring process is seen as an additional (non-statutory) safeguard to prevent inappropriate use of stem cells in research. The Future of HFEA was the subject of a DH consultation between June and September 2012. Two of the three proposals in the consultation proposed to abolish HFEA and transfer its functions elsewhere. This is discussed in more detail in chapter 6. Box 3.6 Principle purposes for embryo research The HFEA Licensing Committee can only licence embryo research if it is satisfied that the use of embryos is necessary and that the proposed research is necessary or desirable for one of the following purposes: increasing knowledge about serious disease or other serious medical conditions developing treatments for serious disease or other serious medical conditions increasing knowledge about the causes of any congenital disease or congenital medical condition that does not fall within the first bullet point promoting advances in the treatment of infertility increasing knowledge about the causes of miscarriage developing more effective techniques of contraception developing methods for detecting the presence of gene, chromosome or mitochondrion abnormalities in embryos before implantation increasing knowledge about the development of embryos. The HFEA and embryo research Any researcher wishing to conduct research on human embryos must first apply for approval from an NHS REC. Once this has been received, HFEA recommends researchers to contact the relevant HFEA staff members to discuss the proposed research prior to making a formal application. Once HFEA has received a formal application along with the appropriate administration fee46, it commissions peer reviewers to assess the application and arranges for an initial inspection of the research establishment(s) in question. The peer review process assesses whether the application: needs to use human embryos to fulfil its stated objectives needs to use the number and type of embryos proposed falls within the statutory requirements of the Act meets the requirements of the HFEA’s Code of Practice. After an initial inspection of the research establishment(s) making the application an inspection report is prepared for the Research Licensing Committee. The committee will consider the inspection and peer reviewers’ opinions along with any other relevant material. It can decide to: grant a licence grant a licence subject to certain conditions refuse a licence. 46 Research licence fees reflect the complexity of the proposed research. For small projects the charge is £500 whereas more complex projects (such as the derivation of hES cells or cell nuclear replacement) the fee is £750. POST Report March 2013 Stem Cell Research Page 23 Table 3.3 Research projects licensed by the HFEA between April 2010 and March 2011 Research group Assisted Conception Service, Glasgow Royal Infirmary Birmingham Women's Hospital/Institute of Biomedical Research Birmingham Women's Hospital Centre for Human Development, Stem Cells and Regeneration, University of Southampton Centre for Reproductive Medicine, Coventry Centre for Stem Cell Biology and Developmental Genetics, University of Newcastle Guy's Hospital, London Hull IVF Unit Human Genetics and Embryology Laboratories, University College, London Institute of Biomedical Research Institute of Reproductive and Developmental Biology, Imperial College, London IVF Hammersmith London Fertility Centre Manchester Fertility Services Ltd/St Mary's Hospital, Manchester/University of Manchester Newcastle Fertility Centre at Life Oxford Fertility Unit/University of Oxford, Dept of Obstetrics and Gynaecology Roslin Cells Limited Section of Reproductive and Developmental Medicine, University of Sheffield/Centre for Stem Cell Biology, Sheffield University of Cambridge Wales Heart Research Institute, Cardiff Welcome Trust Centre for Stem Cell Research, University College Cambridge 47 HFEA Annual Report 2010/11 (www.hfea.gov.uk/146.html) 47 Research area The effect of biomass reduction on embryo development after biopsy of either one or two blastomeres Human gamete interaction and signalling Genetic screening of the pre‐implantation embryo Environmental sensitivity of the human pre‐implantation embryo Indicators of oocyte and embryo development Derivation of ES cell lines from interspecies embryos produced by somatic cell nuclear transfer Improving methods for pre‐implantation genetic diagnosis (PGD) of inherited genetic disease and predicting embryo quality Developing criteria for estimating quality of stem cells derived from human embryos Biochemistry of early human embryos Genetic profiling for infertility and development of novel pre‐implantation diagnosis Derivation of GMP (Good Manufacturing Practice) hES cells Comparative studies on hES cells and stem cells derived from male germ cells The vitrification of blastocysts following biopsy at the early‐cleavage stage or blastocyst stage of embryo development Analysis of chromosomes in human preimplantation embryos using FISH and CGH In vitro development and implantation of normal human preimplantation embryos compared with uni‐ or poly‐ pronucleate pre‐embryos Derivation of hES cell lines from embryos created from clinically unused oocytes or abnormally fertilised embryos Pluripotency, reprogramming and mitochondrial biology during early human development Mitochondrial DNA Disorders: is there a way to prevent transmission? Development of a model to study implantation in the human To derive hES cells and trophoblast cell lines To develop PGD for mitochondrial DNA disease Platform technologies underpinning hES cell derivation Development of hES cell lines to GMP for treatment of degenerative diseases and conditions Derivation of hES cells from human surplus embryos: the development of hES cultures, characterisation of factors necessary for maintaining pluripotency and specific differentiation towards transplantable tissues Investigation into the role of sperm PLC zeta in human oocyte activation Derivation of pluripotent human embryo cell lines POST Report March 2013 Stem Cell Research Page 24 Licences are granted for up to three years. It is a condition of any licence of more than one year’s duration that the licence holder submits an annual progress report to HFEA and a condition of all licences that an end of project report is submitted once the licence has expired. If a licence is refused, the applicants have 28 days in which to appeal against the decision. HFEA aims to process 90% of all research licence applications within three months of receiving the formal application. 3.6 Other research regulation Care Quality Commission (CQC) CQC is the independent regulator of health and social care services in England. Established in April 2009, CQC replaced three previous commissions: the Healthcare Commission, the Commission for Social Care Inspection and the Mental Health Commission. One of CQC’s responsibilities is to inspect facilities such as hospitals and clinics. This means that there is some overlap between inspections conducted by CQC and those carried out by HFEA and HTA. For instance 40 establishments are subject to regulation/registration by HFEA, HTA and CQC, 90 of the 100 or so HFEA licensed centres are also regulated by CQC or are located in premises that are CQC registered and 264 of the 440 HTA licensed establishments are also regulated by CQC.48 Reducing this overlap is one of the factors that prompted proposals to reform regulation in this area. DH has consulted on proposals to abolish HTA and HFEA and transfer their regulatory functions to other regulators. Two of the three proposals involved CQC taking on additional responsibilities. As discussed in more detail in Chapter 6 these options have now been rejected. NHS research permissions In addition to obtaining authorisation from the MHRA for conducting clinical trials, research permissions must be obtained from each of the NHS trusts involved in a trial. Different bodies are responsible for co-ordinating these R&D permissions within the UK: 48 www.ialibrary.bis.gov.uk/uploaded/DH%206044%20%20Consultation%20IA-Transfer-Functions-from-the-HFEA-andHTA.pdf The National Institute of Health Research (NIHR) runs a co-ordinated system for gaining NHS research permissions (CSP) in England. In Scotland, NHS Research Scotland coordinates R&D permissions. In Wales there is a Primary Care Co-ordinating Office that handles R&D permissions for research in primary care settings. In other cases, research permissions are handled by the relevant R&D Office of the NHS organisation involved. The Academy of Medical Sciences’ (AMS) review of the governance of health research identified the process of obtaining NHS R&D permissions as “the most significant barrier to health research in the UK”. 49 It suggested that changes were needed to reduce bureaucracy and increase the speed of NHS R&D permissions. The AMS recommended setting up a new national body to oversee a streamlined, common process for NHS R&D permission for all single and multi-site studies in the NHS in England. There is debate (discussed in Chapter 6) about whether the new HRA should take responsibility for research permissions. Animal research Stem cell researchers may also need to seek regulatory approval from other authorities. For instance, many recent advances in stem cell research have first been achieved using animal studies. Thus, ES cells and IPS cells were first derived from studies in mice. Furthermore, animal models are widely used to study human disease and assess potential new therapies. All animal research in the UK is regulated by the Home Office under the Animals (Scientific Procedures) Act 1986. As outlined in Box 3.7, all UK research involving animals must: take place in a designated research establishment with appropriate facilities be conducted by people who hold a personal licence be part of a programme of research that has received a project licence. 49 A new pathway for the regulation and governance of health research, AMS, January 2011 POST Report March 2013 Stem Cell Research Box 3.7 The Animals (Scientific Procedures) Act 1986 The Animals (Scientific Procedures) Act 1986 was amended by The Animals (Scientific Procedures) Act 1986 Amendment Regulations 2012. It aims to safeguard animal welfare while allowing scientific research involving animals. The Act requires all proposed research involving animals to be assessed by Home Office Inspectors who will weigh the potential benefits of the research against the likely costs to animal welfare. An Inspector will issue a project licence for the proposed studies only if they are satisfied that: the work can only be done by using animals the potential benefits of the work justify the use of animals the study has been designed to minimise a) the number of animals used and b) the pain and suffering of those animals through the use of anaesthetics and painkillers the species chosen for the proposed work is appropriate (use of higher order species such as primates is only sanctioned where absolutely necessary). In addition to project licences, the individual(s) conducting the research and the premises where the research is to be undertaken must also be licensed. Personal licences ensure that people conducting research on animals have the appropriate skills, experience and training. Designated research establishments are inspected by Home Office Inspectors to ensure that they have the appropriate facilities. Finally, all designated establishments are required to have a local ethical review process. This reviews the ethics of proposed research and encourages the adoption of the 3 Rs principles wherever appropriate: a reduction in the number of animals used; replacement of animals wherever possible and; refinement of procedures to minimise potential pain, suffering or distress. Genetic modification Some areas of stem cell research involve the use of viral vectors to transfer genes coding for transcription factors or other regulatory proteins into cells. For instance, genetic modification (GM) has been used to derive IPS cells or to switch cells of one lineage to those of another. Uses of such techniques are regulated by the Genetically Modified Organisms (Contained Use) Regulations 2000.50 These regulations classify GM activities involving micro-organisms from Class 1 (no or negligible risk) to Class 4 (high risk).51 They require researchers to: notify the Health and Safety Executive (HSE) prior to a premises being used for GM activity for the first time conduct a risk assessment of activities involving GM micro-organisms notify the competent authority of all activities involving Class 2 (low risk) to Class 4 (high risk) microorganisms await consent before proceeding with Class 3 (medium risk) and 4 activities. 50 51 As amended by Regulations in 2002, 2005 and 2010. www.hse.gov.uk/pubns/misc208.pdf Page 25 3.7 Stem cells and clinical trials Stem cells and medicinal products The regulations that apply to stem cell therapies vary depending on whether or not the cells used are classified as medicinal products. Blood stem cells have been used in transplantation therapies since the early 1980s. The cells used in such therapies are not classified as medicinal products because: they have undergone only very minimal manipulation (such as basic purification and preservation techniques); they perform the same function in the recipient as they did in the donor. Because they are not classified as medicinal products, the cells used in transplantation therapies do not have to comply with ‘medicine’ regulations (Box 3.8). Rather, minimally manipulated stem cells used in transplantation therapies are regulated under the EU Tissues and Cells Directive as transposed into the UK Q&S Regulations (see Box 3.5). HTA is responsible for licensing organisations involved in all stages of the preparation, distribution and use of such cells in transplantation. Cells that are classified as medicinal products include those that: have undergone more substantial manipulation are not intended to perform the same function in the recipient as they do in the donor. Such products are known as Advanced Therapy Medicinal Products (ATMPs). As outlined in the following section, they are regulated by EU directives and regulations that enshrine the same principles as those in the existing legislation on medicines (Box 3.8). These require medicines to be made to very high (good manufacturing practice or GMP) quality standards, and manufacturers to submit data from clinical trials to show a medicine is safe and effective before market authorisation can be granted. There is also a requirement for postauthorisation vigilance to detect any adverse effects once a medicine is in widespread use. POST Report March 2013 Stem Cell Research Page 26 Box3. 8 The EU Clinical Trials Directive Potential new medicines are investigated in clinical trials, the conduct of which is regulated by the Clinical Trials Directive (2001/20/EU). This Directive was transposed into UK law as the Medicines for Human Use (Clinical Trials) Regulations 2004. As well as regulating the conduct of clinical trials, these regulations provide a legal basis for RECs, require phase I trials (see Box 3.3) to be authorised by MHRA, require all medicinal products used in trials to be made to Good Manufacturing Practice (GMP) standards by a licensed manufacturer and empower MHRA to perform statutory inspections to maintain standards. Different types of Advanced Therapy Medicinal Products ATMPs are defined by the 2001 EU Directive on medicinal products for human use and by the 2007 Regulation on advanced therapy medicinal products. Between them, these define three main categories of ATMPs that may be used to treat, diagnose or prevent disease in humans. Somatic cell medicinal products use cells from various sources. The cells used may come from the patient receiving therapy, be donated by another person or be of animal origin. Gene therapy involves the transfer of a gene into a patient in a way that ensures the gene will be actively expressed in the human body. It may be used to express a therapeutic protein in the body, or to prevent one of the patient’s own genes being expressed or for diagnostic purposes. The gene to be transferred is often tagged with other sequences to promote expression and delivered using a vector which is often viral in origin. Tissue engineered products are defined as those containing or consisting of engineered cells or tissues that can be used to regenerate, repair or replace human tissue. The cells or tissue in a TEP may be of human or animal origin (or both) and may be viable or nonviable. A TEP may also contain other components such as cell products, biomolecules, biomaterials, chemical substances, scaffolds or matrices. Each of these three types of ATMP can be used in conjunction with one or more medical devices to give rise to fourth type of ATMP: a so-called combined ATMP. The term medical device covers a very diverse range of equipment that is regulated under separate EU Directives (see Box 3.9). Box 3.9 Regulation of medical devices The term medical device covers a very wide array of medical equipment, from stethoscopes to pacemakers. It is estimated that there are around 200,000 different types of medical devices on the market in the EU alone.52 Medical devices are regulated under three Directives, 90/385/EEC relating to active implantable medical devices, 93/42/EEC concerning medical devices and 98/79/EC on in vitro diagnostic medical devices. These Directives lay down essential requirements for medical devices, set out conformity routes for manufacturers to follow and require devices to be classified into one of four groups: Class I for low-risk devices such as stethoscopes Class IIa for low to medium risk devices such as diagnostic equipment and blood pressure monitors Class IIb for medium risk devices like X-ray machines Class III for higher risk, implantable devices such as coronary stents, prosthetic heart valves and defibrillators. Manufacturers must undergo a conformity assessment process and obtain approval from a Notified Body before marketing a new device in classes IIa, IIb or III. For Class ll devices (a or b) this involves the Notified Body reviewing a technical dossier submitted by the manufacturer. For Class lll devices, the manufacturer must conduct human clinical investigations, but not necessarily randomised clinical trials. In September 2012 the European Commission published proposals for new legislation on medical devices. An MHRA consultation on these proposals closed in January 2013. Provided the device is incorporated as an integral part of the product, it will be classified as a combined ATMP. In order to obtain a marketing authorisation for a combined ATMP, the applicant will have to show that the product satisfies the medical devices requirements (Box 3.9) as well as the ATMP regulations. ATMPs in clinical trials Cell therapies must be tested in clinical trials before they can be widely used. The process was outlined in Box 3.3. Researchers have to apply to the MHRA for a manufacturer’s licence in order to make an ATMP for use in clinical trials, to ensure that the product conforms to the highest standards of GMP. They also have to apply to the MHRA for authorisation to conduct the clinical trial in accordance with the EU Clinical Trials Directive (Box 3.8). Data from clinical trials are submitted to the appropriate regulatory body (the European Medicines Agency, see next section) which will then decide whether to award marketing authorisation. In making this decision, the EMA assesses the quality, safety and efficacy of the ATMP in question. 52 www.europeanhospital.com/en/article/8649New_EU_medical_device_legislation.html POST Report March 2013 Stem Cell Research In practice, making such an assessment is more difficult for a complex product such as an ATMP than it is for a simple (small molecule) drug. For instance, the applicant will have to show that the therapy in question is a high quality, well defined investigational product, such as a homogenous population of viable cells. They will have to provide details of the cell culture conditions, of the composition of the culture medium, and show that they can reliably and reproducibly manufacture a pure, sterile, stable and well characterised product. In addition to these quality considerations, the clinical trial will also have to provide detailed information about what happens to the ATMP once it is administered. This will include proof of principle − for example proof of regeneration from appropriate animal models − that the approach works, and details of the distribution, growth and adherence of cells or tissue once given to patients. Key safety concerns here include the potential for cells to cause tumours and the likely immunological reaction of the patient to cells, tissue or reagents. Finally, applicants will have to provide information on the potency of the ATMP − the relationship between dose and clinical effect − so that efficacy can be assessed and the optimum dose determined. The centralised procedure All ATMPs must be assessed by the EMA through its centralised procedure before they can be used (marketed). A successful application through this route leads to a single marketing authorisation that is valid in all EU countries, as well as Iceland, Liechtenstein and Norway. The centralised procedure is compulsory for: all ATMPs such as somatic cell therapy, gene therapy, tissue engineered products and combined ATMPs other medicines derived from biotechnology processes, such as genetic engineering human medicines for the treatment of HIV/AIDS, cancer, diabetes, neurodegenerative diseases, auto-immune and other immune dysfunctions, and viral diseases veterinary medicines for use as growth or yield enhancers officially designated orphan medicines (medicines used for rare human diseases). Page 27 Box 3.10 Exemptions to ATMP marketing authorisation Two exemptions allow the supply of unlicensed ATMPs within the UK. Both focus on applying therapy to address specific needs of individual patients rather than provision of a standard therapy for multiple patients. They are:53 The hospital exemption. If an ATMP is prepared within the UK on a non-routine basis for use in the UK only in a hospital in accordance with a medical prescription for an individual patient then marketing authorisation may not be required. The specials exemption. Marketing authorisation may also not be required if an ATMP is supplied in response to a bona fide unsolicited order, formulated in accordance with the specification of a doctor, dentist or supplementary prescriber and for use by his individual patients on his direct responsibility in order to fulfil the special needs of those patients. Applications through the centralised procedure are submitted directly to the EMA; evaluation by the Agency's scientific committees takes up to 210 days. Applications involving cell therapy and other types of ATMPs are considered by the EMA’s Committee for Advanced Therapies (CAT). The CAT considers the evidence submitted and makes a recommendation to the EU Commission on whether the product in question should receive a marketing authorisation. In practice, it can be difficult to determine whether certain types of products should be classified as an ATMP or (say) a medical device. Recognising this, the CAT offers an optional procedure whereby companies can apply to check the ATMP classification of their product prior to submitting an application for marketing authorisation through the centralised procedure. The Committee will give its opinion on whether the product in question satisfies the criteria for being classified as an ATMP within 60 days. As outlined in Box 3.10, there are two exemptions to the centralised procedure outlined above. Both allow the supply of unlicensed ATMPs − i.e. those that have not received a marketing authorisation − for use in the UK under certain, clearly defined, circumstances. 53 www.mhra.gov.uk/Howweregulate/Advancedtherapymedicinal products/FAQs/index.htm Page 28 3.8 The Stem Cell Tool Kit In order to help stem cell researchers navigate the somewhat torturous regulatory pathway from laboratory to clinic, the DH published the UK Stem Cell Tool Kit in 2009. It is designed to be a reference tool for those wishing to develop a programme of human stem cell research and manufacture, ultimately leading to clinical application. It was a joint collaboration between MRC, GTAC, DH and all of the regulatory bodies involved in the pathway. The tool kit has been updated on a regular basis to keep pace with changes to the regulatory system. It is an iterative tool which maps out a regulatory path for researchers in response to their answers to a succession of questions. The Tool Kit can be accessed at www.sc-toolkit.ac.uk. POST Report March 2013 Stem Cell Research POST Report March 2013 Stem Cell Research 4 Page 29 Scientific advances Overview It is different patterns of gene expression that make one type of cell differ from another. Recent years have seen great advances in understanding of the factors that control gene expression. This knowledge can be used to direct cells down specific differentiation pathways. It can also be used to reprogram cells from a highly differentiated (adult) state to cells that behave in a similar manner to embryonic cells. Such approaches are delivering better disease models for research 4.1 What makes stem cells different? Virtually all of the cells in the human body carry a complete set of human genes. Cells contain mechanisms for switching genes on and off and for modulating their activity. Different subsets of genes are expressed to different extents in different types of cells. It is the mechanisms that control gene expression that make a stem cell different from other types of cell and that are responsible for its pluripotency and ability for self-renewal. The same mechanisms also direct the stem cell’s fate during differentiation into more specialised cell types. This chapter: outlines some of the key factors that maintain ES cells and direct their differentiation down different cell lineages describes how this knowledge can be used to direct a cell’s fate in cell culture looks at how such knowledge can be used to reverse differentiation and produce iPS cells from more specialised cell types discusses the potential for using hES and iPS cells in research 4.2 Factors that control differentiation A cell’s fate is determined by the way its genome interacts with its cellular and signalling environments. Recent research has focused on understanding the different processes that control these interactions and ultimately regulate how a cell behaves. Various mechanisms operate at different levels and include: epigenetic factors such as chemical modification of the regulatory regions of the genes, the proteins associated with gene sequences or other factors that interfere with the processes by which genes are copied and translated into proteins (see Box 4.1) proteins known as transcription factors that bind to the regulatory regions of genes and modulate their activity upwards or downwards (see Box 4.2). Box 4.1 Gene expression and epigenetics Differentiation and gene expression All of the cells in the early embryo carry a complete set of human genes. But not all of the genes are equally active in all of the tissues all of the time. Cells contain mechanisms for turning genes on (expressing them) and off (repressing them) and for modulating the extent of their activity. This means that different genes will be active to different extents in one cell type compared with another. It is the processes that control which genes are promoted and repressed that determine the eventual developmental fate of a stem cell. Epigenetic factors involved in control of gene expression Some of the epigenetic mechanisms that control gene expression have been established for some time. They are referred to as epigenetic mechanisms because they do not involve changes to the sequence of the DNA, but do exert an influence on gene expression and thus on protein synthesis and the characteristics of the organism of which they are part. For instance: DNA methylation. Each gene has an associated regulatory region. A range of different factors can bind to the regulatory region of a gene and influence gene expression. The extent to which the regulatory region is available for binding and the type of factors that it can bind to is affected by chemical modification (methylation) of the DNA of the regulatory region. Histone modification. The DNA sequences that make up genes exist in the cell nucleus in close association with proteins known as histones. Chemical modifications to histone proteins – such as the addition or removal of methyl, acetyl or phosphate groups – can affect the strength of the interaction between histones and DNA. This influences the extent to which a particular gene’s regulatory region is available to interact with other factors. The chemical modification patterns of histones and DNA are known as imprinting. RNA-mediated silencing. In order to generate a protein from instructions encoded in the DNA of a gene, the gene must first be copied (transcribed) into a (closely related) RNA form. This is then transported from the nucleus to the cytoplasm, where it forms the template for the synthesis of a specific protein. It has been well established that small strands of RNA can interfere with the production of protein from RNA templates in the cytoplasm. More recent research suggests that small strands of RNA can also interfere with the regulatory regions on the genes held in the nucleus, effectively preventing the gene from being transcribed.54 54 Grimm D, Advanced Drug Delivery Reviews, 61, 672–703, 2009 POST Report March 2013 Stem Cell Research Page 30 Box 4.2 Transcription factors While the epigenetic mechanisms outlined in Box 4.1 are important in controlling gene expression, research suggests that there are other, overarching factors involved in directing cell fate. Attention has focused on a group of proteins called transcription factors. These factors exert their influence by binding to regulatory regions and directing the modification of histone proteins, thus controlling how accessible a gene is for gene expression. There is evidence that it is these transcription factors that are involved in directing stem cells down particular differentiation pathways (lineages). For instance, the transcription factor Runx1 is the major regulatory factor that directs a stem cell down the haematopoietic (blood stem cell) pathway. Another, related, transcription factor Runx2 guides stem cells down the osteogenesis (bone stem cell) pathway. Moreover, the continued presence of such transcription factors is needed in order to maintain tissue specificity during cell division.55 In other words, it is transcription factors that effectively constitute a cell’s ‘memory’ of the differentiation pathway it has taken. Further differentiation into more specialised cell types occurs through the action of regulatory factors that bind to restriction factors and modulate their action. The mechanisms outlined in Boxes 4.1 and 4.2 act together to orchestrate different patterns of gene expression and direct cell fate down different developmental pathways (lineages). Improved understanding of such factors is allowing researchers to control the direction of cell fate in a range of ways (Box 4.3). The binding of transcription factors to regulatory regions of genes exerts the most profound influence on what genes are expressed within a cell. A defining feature of transcription factors is that they are proteins − and hence are themselves coded for by genes − that can bind to DNA. Analyses of the human genome have identified around 2,600 genes that code for proteins with DNA binding sites. Many of these are thought to be transcription factors. This section looks at recent research on the factors that control the following processes: preventing differentiation for example in totipotent, pluripotent and germ line cells the emergence of the trophectoderm the emergence of each of the three main types of cell (ectoderm, endoderm and mesoderm) replenishing cells in adults from stores of Adult Stem (AS) cells. Box 4.3 Directing cell fate Improved understanding of the mechanisms involved in differentiation raises the possibility of being able to direct cell fate, by reprogramming cells of one type into cells of another. There are three main possibilities: Directing differentiation within a particular lineage. For instance, taking haematopoietic (blood) stem (HS) cells and adding transcription and/or growth factors to encourage differentiation into more specialised types of blood cell. Reversing differentiation to produce less specialised cells. It is well established that factors in the cytoplasm of egg cells (oocytes) can reprogram adult DNA. For instance, the researchers who created Dolly the sheep did so by removing the nucleus from a sheep’s egg and replacing it with the nucleus of an adult (sheep) cell taken from the udder. Factors in the egg’s cytoplasm effectively turned back the clock on the nuclear DNA, making it ‘forget’ that it had once been part of a highly specialised adult cell. In its new environment, the nucleus behaved as if it were part of a (totipotent) newly fertilised egg. Research has now identified several key transcription factors involved in pluripotent cells. It has been shown that transferring the genes coding for these factors into adult skin cells (fibroblasts) can induced pluripotency in those cells, both in mice56,57 and in humans.58,59 As discussed in this chapter, the resulting induced pluripotent stem (iPS) cells are similar to embryonic stem cell lines. Directly switching cells of one lineage to cells of another lineage. A similar approach to that used to derive iPS cells has been employed to convert mouse fibroblasts directly into neurons (nerve cells). Researchers identified a series of transcription factors that are active in neurons, and found that transferring the genes coding for three of these factors into fibroblasts converted them into neurons.60 After a few days, the cells began to behave like neurons, eventually producing electrical signals and forming connections with each other in culture. Preventing differentiation While most of the cells found in a human embryo will eventually differentiate into more specialised cell types, some retain their undifferentiated character. Examples include the totipotent cells found in early embryos up until three days after fertilisation, the pluripotent hES cells that make up the inner cell mass of a blastocyst (see Chapter 2) and the cells that are destined to become germ-line cells (eggs or sperm) in adults. 56 57 58 55 Stein G et al, Advances in Enzyme Regulation, 50 (1), 160-167, 2010 59 60 Takahashi K and Yamanaka S, Cell, 126 (4), 663–76, 2006 Okita K et al, Nature 448 (7151), 313–17, 2007 Yu J et al, Science, 318 (5858), 1917–20, 2007 Takahashi K et al, Cell, 131 (5), 861–872, 2007 Vierbuchen T et al, Nature, 463, 1035-1041, 2010 POST Report March 2013 Stem Cell Research Studies in mice, and more recently humans, have implicated the transcription factor Oct 4 as playing a key role in preventing differentiation in these cells.61 For instance, research has shown that Oct 4 is expressed in all of the cells of the early embryo, and in the hES cells of the inner cell mass. In contrast, Oct 4 expression in adults is confined to the developing germ cells. Experiments in mice show that selectively disrupting the gene that codes for Oct 4 produces embryos devoid of a pluripotent inner cell mass.62 However, more recent research suggests that Oct 4 is not the only factor involved. Comparing patterns of gene expression in (undifferentiated) ES cells with those in differentiated cells allow researchers to identify genes that are highly active in ES cells. Many of the genes identified in this way code for transcription factors. Researchers can investigate the function of these factors in various ways. For instance, they can ‘silence’ a gene by using RNA sequences and see what effect this has on the cells being studied. Or they can use viruses to transfer and express different combinations of the genes into various types of cells. Such approaches have identified genes coding for another two transcription factors that are highly expressed in ES cells. In addition to Oct 4, the others are: Nanog (derived from 'Tir nan Og' the mythologic Celtic land of the ever young)63,64 Sox 2 (sex determining region Y, Box 2).65 These three factors are implicated in supporting self-renewal and maintaining pluripotency in ES cells. They co-occupy binding sites on hundreds of different genes in ES cells66 and also interact directly with proteins; a recent study identified nearly 100 proteins that interact with Oct 4.67 Furthermore, each may play a role in regulating the other two. For example, the gene that codes for Nanog contains binding sites for Oct 4 and Sox 2.68 Such arrangements provide a precise mechanism for regulating the levels of these factors within ES cells. This is important since research has shown that ES cells will start to differentiate if Oct 4 levels get too low or too high.69 61 62 63 64 65 66 67 68 69 Oct 4 is octamer-binding transcription factor. It is also sometimes referred to as Oct 3 or Oct 3/4. Pan GJ et al, Cell Research 12, 321-329, 2002 Chambers I, et al Cell. 2003;113:643–655 Mitsui K, et al Cell. 2003;113:631–642. Avilion AA, et al Genes Dev. 2003;17:126–140 Lo, Y-H, et al Nature Genetics 2006, 38 (4) 431-440 Pardo M, et al J Cell stem cell 2010, 6, 4, 382-95 Kuroda T, et al Mol. Cell. Biol. 2005 25 (6) 2475-2485 Niwa, H, et al Nature. Genetics. 2000 24, 372– 76). Page 31 It is thought that these three factors are at the top of the regulatory hierarchy. Their continued presence is required to prevent differentiation by controlling the genes that code for many of the other transcription factors that are involved in the process. In practice, this means that maintaining pluripotent ES cells in cell culture is a very fine balancing act that requires precise control of the culture conditions. Emergence of the trophectoderm The earliest differentiation event in the development of the human embryo is the emergence of the trophectoderm. After about three days, the embryo forms a solid mass of cells (the morula) which then develops into a blastocyst. The blastocyst is organised into an inner cell mass of hES cells and an outer layer (trophectoderm). Researchers have started to unravel the complex series of events behind this differentiation step.70 They have implicated an enzyme called YAP-1 in triggering the process. In cells near the centre of the morula, the enzyme is essentially inactivated. These cells remain pluripotent and give rise to the hES cells in the inner cell mass. In cells near the outer edge of the morula, YAP-1 remains active and triggers a complex series of events that results in the expression of the transcription factor Cdx-2. This factor represses the expression of factors such as Oct 4 and Nanog, and this in turn triggers a cascade of other factors that allow the outer cells to start to differentiate into the trophectoderm. The trophectoderm eventually develops into the fetal portion of the placenta. Differentiation of the inner cell mass The hES cells in the inner cell mass have the ability to give rise to all cell types present in the embryo. This make such cells a valuable tool for understanding the complex mechanisms involved in the development of specialized cells and the establishment of organ structures. These cells give rise to extra-embryonic tissue and three different cell layers: ectoderm (cells on the outside), endoderm (cells on the inside), and mesoderm (cells present in the middle). The development of the cell layers gives rise to the organs and tissues of the organism: endoderm develops into structures like the stomach, liver, lungs, and intestines mesoderm forms structures like the skeleton, spleen, heart, and blood ectoderm differentiates into the central nervous system, lens of the eye, the epidermis, hair, and mammary glands. 70 Kuckenberg P, et al Molecular Cell Biology 2010, (30), 13, 3310-20 POST Report March 2013 Stem Cell Research Page 32 Researchers have identified specific genes coding for different transcription factors that are involved in directing ES cells down each of these tissue lineages. However, all of the genes investigated to date are under the control of the overarching factors Oct 4, Nanog and Sox 2. Adult Stem (AS) cells Many organs in the adult body contain a population of cells that serve as sources of cell replacement throughout life. Some of these are progenitor cells, that have a limited capacity for self-renewal and give rise to a very limited (usually just one) range of cells. Others are adult stem (AS) cells that have unlimited capacity for self-renewal and can give rise to a wider range of cell types such as: the hematopoietic stem cells present in adult bone marrow that constantly produce red blood cells and a wide range of other blood cells stem cells present in the skin and gut which also routinely renew depleted cells. Smaller numbers of AS cells are also found in other parts of the body. For instance, the adult brain contains small numbers of stem cells in restricted areas. However, these do not appear to routinely contribute significantly to the replacement of depleted cells. Nor do they appear to be capable of aiding functional recovery in the event of tissue damage. AS cells in the human body are found in so-called stem cell niches (see Section 2.4). These are microenvironments that provide the necessary physical and chemical factors that allow the AS cells to tick over while maintaining their multipotency. The AS cells interact with the stem cell niche and respond to signals indicating, for example, cell depletion or tissue damage. The complex nature of the stem cell niche makes it difficult to recreate in the laboratory when attempting to grow AS cells in cell culture (see next section). 4.3 Directing cell fate in cell culture The advances outlined in the previous section has allowed researchers to direct cells down different development pathways in the laboratory. For instance: directing differentiation within a particular lineage (for instance using regulatory factors to direct blood stem cells to differentiate into specialised blood cells such as lymphocytes) converting cells of one lineage (skin stem cells) into cells of another lineage (neurons) reversing the differentiation process by transforming partially differentiated multipotent cells back into cells that act in similar manner to pluripotent stem cells (see next section). Cell culture Cell culture refers to the practice of cultivating living cells in the laboratory. Box 4.4 outlines the basic principles involved. A wide range of chemical and physical factors can determine the fate of pluripotent or multipotent stem cells grown in culture. Chemical factors include specialised growth factors that promote self renewal, boost the expression of certain genes needed to maintain pluripotency and prevent cell death. Physical factors include the surface or other support matrix the cells grow on as well as factors such as the concentration of salts and the availability of oxygen. The aim is to produce culture conditions to encourage self-renewal while preventing the cells from differentiating. Deriving ES cell lines ES cells were first derived from cultured mouse embryos in 1981 by two independent groups: a UK team based in Cambridge and a US group at San Francisco (which coined the term embryonic stem cell). However it was not until the mid 1990s that the first ES cell lines from mice were established.71 Advances in culture techniques led to the establishment of human ES cell lines by the late 1990s.72 In 2003 the first hES cell lines were derived in the UK. 73 Since then much research has been done to establish standardised methods to derive and maintain hES cells. Human ES cell lines are derived from embryos donated by patients attending in vitro fertilisation (IVF) clinics who may consent to surplus embryos being used for research. The embryos are usually cultured to the blastocyst stage (day 6 of culture) and then micromanipulated under the microscope to remove the outer shell (the zona pellucida). The whole embryo or just the inner cell mass is cultured in inactivated mouse or human embryonic fibroblasts and specialised culture medium containing growth factors (see Box 4.2). Some of the cells from the inner cell mass will proliferate and remain pluripotent under the appropriated culture conditions. The hES cells are maintained in culture and their adaptation to the culture conditions analysed to check that they show consistent characteristics. At this stage the cells can be considered to be an hES cell line. 71 72 73 Thomson et al., 1995; Thomson et al., 1996 Thompson and co-workers in 1998, Reubinoff et al., 2000 Pickering SJ et al., 2003; Stojkovic M et al., 2004 POST Report March 2013 Stem Cell Research Page 33 Box 4.4 Cell culture Cells growing as part of a living organism such as an animal are supplied with all the water, nutrients and oxygen they need via the blood system, which also removes waste products such as metabolites and carbon dioxide. In order to grow cells in the laboratory, ways must be found to supply all the necessary nutrients and remove the waste products. As outlined in Figure 4.1 below, this involves: Using a growth medium containing water, sugars (for energy), vitamins, amino acids, lipids and inorganic salts. Figure 2.3 Deriving NTS cells Other factors to regulate cell growth and prevent differentiation. These may be provided by culturing stem cells with inactivated feeder cells. The feeder cells are inactivated by irradiation or chemical treatment to prevent them from dividing and competing with the cultured cells. An alternative is to use ‘conditioned’ media that contains secretions from feeder cells but not the cells themselves. Providing a suitable surface for the cells to grow on. In their natural environment cells are used to being surrounded by other cells on all sides. Feeder cells not only provide essential regulatory and growth factors, but also a physical substrate for the hES cells to grow on. An alternative is to provide an extracellular matrix such as a gel. Aseptic culture conditions to prevent (slow growing) stem cells being swamped by faster growing microbes such as bacteria or yeast. Frequent sub-culture onto new growth media. This ensures that the cells get sufficient nutrients and prevents the build up of waste products. Traditionally, hES cells have been maintained in culture on layers of mouse embryonic fibroblasts. The culture media itself may contain undefined components such as bovine fetal serum and other supplements. Recent years have seen a shift away from such culture methods towards more carefully defined culture conditions. There are several factors driving this trend: Cell-based therapies intended for clinical use will have to be derived and cultured without the use of animal feeder cells. This is because of the possibility of the therapeutic cell lines being contaminated by harmful elements (viruses, antigens, etc.) potentially associated with animal cells. The need to reduce variability from batch to batch. Feeder cells can vary considerably from one strain of mice to another, and have markedly different effects on the hES cells grown on them. The need to reduce variability from one laboratory to another. Using fully defined culture conditions make it easier for one laboratory to verify or reproduce research carried out in another. There are two key challenges to achieving fully defined cell culture conditions: Fully defining the chemical components of the culture medium. Considerable progress has been made on this front. For instance, researchers at Yale University reported a fully defined medium for the cultivation of hES cells in 2006.74 It contained basic fibroblast growth factor, Wnt3a (a protein involved in regulating cell fate), April (a proliferation-inducing cytokine), BAFF (B cell-activating factor), albumin, cholesterol, insulin, and transferrin (an iron binding protein). Other chemically defined culture conditions have been described75 and some chemically defined growth media are commercially available. Defining the surface the cells grow on. Cells are very fussy about the surfaces they grow on, and surface can influence whether a cell grows at all, whether it maintains pluripotency or starts to differentiate. Approaches here include the use of gels and plastics or other polymers coated with proteins, peptides or other bio-molecules.76 Several of these surfaces are commercially available, and have been used in conjunction with chemically defined media to maintain hES cells. FIGURE 4.1 CELL CULTURE Figure 4.1 Cell Culture Figure 6.1 UK Medical biotech pipeline 74 75 76 Lu J et al, Proc. Natl. Acad. Sci. USA, 103(15), 5688-93, 2006 Rajala K et al, Stem Cell Studies; volume 1, e3, 2011 Baker M, Nature Methods, Volume 8, 293–297, 2011 POST Report March 2013 Stem Cell Research Page 34 The state of the donor embryo and the culture conditions affect the characteristics of the derived cells. Only a minority of the embryos used successfully generate hES cell lines, and not all of these turn out to be stable in the longer term. Despite technical improvements over the past decade the success rate of the procedure is still low, indicating the complexity of the processes involved. Procedures to derive hES cell lines are essentially similar from one UK stem cell centre to another. Factors that improve the likelihood of successfully deriving hES cell lines include using earlier stage embryos, culturing them on defined substrates rather than feeder cells, and culturing them in lower oxygen levels (similar to those found in the womb). Culture conditions The first culture conditions described for hES cells used an array of animal components. For instance, the main medium consisted of fetal bovine serum and the cells were co-cultured with inactivated mouse embryonic fibroblasts. These so-called feeder cells not only provide the growth factors needed to keep the hES cells in an undifferentiated state, but also act as a support matrix for cell growth. However, such components are poorly defined and have the potential to vary from batch to batch or from one laboratory to another. They also raise concerns about possible contamination of cell cultures with animal pathogens or components that could cause an adverse immune response. Because of these concerns, researchers are moving towards more strictly defined culture conditions. As outlined in Box 4.4 this involves developing chemically defined growth medium and defined structures for cell to grow on. Reliably maintaining hES cell lines While culture conditions have been refined in recent years, the efficient and reliable long-term maintenance of hES lines presents researchers with a number of challenges. These include: devising new methods to improve the efficiency by which cell lines can be derived from embryos, which may involve studies to investigate what (if any) are the differences between hES cells grown as cell lines and hES cells in the inner cell mass of an embryo defining growth conditions that allow robust maintenance of ES cell lines for large scale expansion Box 4.5 Autologous and allogeneic therapy There are two main ways that human cells can be used directly for therapy. Autologous therapy, where a patient’s own cells are isolated, processed, possibly multiplied or manipulated in some way(s), then used for therapeutic purposes at the appropriate site in the body. Such an approach has the advantage that the cells are unlikely to be immunologically rejected by the patient. Allogeneic therapy, where cells from one person are used to treat another person. One advantage of this approach is that of immediacy; cells can be banked ready for immediate use, rather than having to be isolated and multiplied up in number prior to use. However, a disadvantage of allogeneic therapy is the possibility that the patient will immunologically reject the therapeutic cells. One potential way round this is to bank cells with different tissue types, and to match the cells used for therapy to the patient. Another is to limit allogeneic therapy to those sites in the human body − such as parts of the central nervous system − where immune reactions may be less likely to occur. Such sites are referred to as immune privileged sites and are described in more detail in Chapter 5 (Box 5.4). defining derivation and growth conditions that allow for consistent batches of hES cells the production of clinical grade cell lines for clinical use. Clinical grade cell lines The first hES cell lines have proved to be useful research tools and are designated as research grade cell lines. Interest in using stem cells in clinical applications has risen in recent years. As outlined in Box 4.5, they may be used therapeutically in two main ways. Autologous therapy involves using the patient’s own cells for therapy whereas allogeneic therapy involves using cells taken from another person. A major potential drawback with allogeneic therapy is graft versus host disease (GVHD, see Box 4.6). This arises when a certain type of T cells originating from the donor recognise the host’s tissue as being foreign and start to attack it. However, as outlined in Box 4.6, other types of donor T cells can exert beneficial effects such as graft versus tumour (GVT) responses. Any cells used for clinical purposes must be isolated, processed, stored and tested to current appropriate quality standards. These standards are laid down in the Quality and Safety Regulations (Box 3.5) and are designed to ensure that the cell lines are free from contamination, well characterised, stable and predictable over time and can be produced and maintained in a consistent manner. POST Report March 2013 Stem Cell Research Box 4.6 Graft versus Host Disease (GVHD) and Graft versus Tumour (GVT) responses HS cell preparations (grafts) transplanted from a donor to another individual will contain − or have the ability to develop into − cells of the immune system called T cells. The job of these cells is to identify proteins (antigens) on the surface of cells and attack any that are foreign or abnormal. This can have both harmful and beneficial results for patients. The harmful results are called graft versus host disease (GVHD) which results from the transplanted T cells attacking host cells in tissue such as the gut, liver, skin, and lungs. GVHD manifests itself in a variety of ways, but can result in graft rejection and the death of the patient. Beneficial results include attacking foreign cells such as pathogenic viruses and bacteria thus conferring immunity to some infectious diseases. Transplanted T cells can also identify and attack abnormal cells such as tumour cells, resulting in a beneficial graft versus tumour (GVT) response. These harmful and beneficial effects are caused by different sub-populations of T cells. Broadly speaking, GVHD is caused by so-called naive T cells (TN) that have yet to encounter a specific antigen and thus attack any cells they recognise as being foreign. The beneficial effects are largely caused by TM cells that have already encountered an antigen and specialise in attacking cells that carry it. A third group of T cells called TREG cells can also exert beneficial effects by suppressing T cell responses and thus aiding acceptance of the graft. The current strategy for minimising GVHD is to use tissue typing to ensure that antigens found on the host cells match those found on the donor cells as closely as possible. However, researchers are now trying to develop strategies to ‘tweak’ the transplanted graft by removing the TN cells while retaining or expanding the beneficial TM and TREG cells. In practice, the standards for stem cells for clinical use involve quality control measures to minimise variability across all stages of manufacture validated to demonstrate generation of a reproducible product. These cover: Avoidance of contamination. Standard methods of sterilising the final product may not be applicable for products such as stem cells, so the emphasis is on aseptic processing throughout the manufacturing process. In practice this means using a specific clean environment where all the equipment and reagents are tested independently, the air quality monitored, etc. Robust manufacturing processes. This involves making and testing appropriate master cell banks of cells and developing in-line testing to ensure that derived cell type meets the required standards. Tese must be able to deal with managing the risk of cells becoming genetically (or epigenetically, see Box 4.2) aberrant or changing in some other way that increases the eventual risk to the patient. Page 35 Traceability. It is important that all substances that have come into contact with the cells or tissue to be used in clinical applications can be traced. In practice this means using carefully defined culture media and monitoring of process conditions. Stem cell banking It is a condition of an HFEA research licence that all hES cell lines generated by UK researchers be deposited in the UK Stem Cell Bank (UKSCB). In the UK there are five centres for Stem Cell Biology that have facilities that comply with clinical grade cell line standards. In December 2011 the National Clinical Stem Cell Forum published a statement summarising the progress made in this area during 2011.77 It noted that: Edinburgh (Roslin Cells) has derived ten new hES cell lines under licence from the HFEA and HTA to quality assured standards stipulated for human clinical use. These have been isolated free from animal-derived products (xenofree) using human cell feeders and banked as feeder-free cultures. Applications to deposit all of these lines in the UKSCB were submitted in 2011. Manchester has derived five lines on human feeders under HTA licence in 2011, all of which could be considered clinical grade. The most recent of these is entirely xenofree. All of the lines will also be submitted (to UKSCB) for unrestricted access. Kings College London has recently submitted applications to UKSCB to deposit, for unrestricted access, the first two clinical grade hES cell lines derived in an HTA-licensed facility at Guy’s Hospital. These two clinical grade lines are xenofree. Newcastle has derived an hES cell line which is in compliance with GMP standards. Both the clinical and research grade versions of this (Ncl14) line have been banked with the NSCB and are available to the scientific community without restriction. The researchers have also derived a human foreskin fibroblast line (NclFed1A) in compliance with GMP standards which they hope to bank with the UKSCB. Sheffield has 8 newly derived hES cell lines to clinical standards using human feeder cells. Two research lines (Shef3 and Shef6) have also been re-derived to meet clinical requirements. All lines are deposited in the UKSCB for unrestricted access. 77 www.clinicalstemcellforum.org.uk/NChESCF_ UpdateDec2011_V03.pdf POST Report March 2013 Stem Cell Research Page 36 In total, the UK Stem Cell Bank’s Steering Committee has approved more than 100 cell lines including 28 potential clinical grade lines. Currently 23 hES cell lines are available on application to the Steering Committee. More are in the process of being released as samples are submitted to the UKSCB and banking and testing are completed. Deriving different lineages from stem cells Much recent research on stem cells has focused on understanding the induction of hES and other stem cells into specific lineages. Laboratories are investigating the combination of factors and conditions necessary to direct specific cell fate decisions. As outlined previously, during normal embryonic development the pluripotent hES cells that make up the inner cell mass of the early embryo give rise to three different cell layers: endoderm, mesoderm and ectoderm. These differentiation events can be re-created in the laboratory. For instance, simply removing hES cells from the support cells with which they are cocultured causes the hES cells to clump together into embryoid bodies. These are aggregates of hES cells that can be grown in suspension that have the potential to differentiate into each of the three main cell layers. More recently, monolayer systems have been developed which allow researchers greater control in directing the differentiation of cells under defined culture conditions.78,79 The following sections look at how such methods may be used to direct differentiation of cell lineages in the laboratory. Endoderm Liver cells It is possible to induce differentiation of hES cells into endoderm cells in the laboratory which can then be differentiated into liver cells. Hepatocytes (liver cells) are a particular focus of attention. One interest here is that it may prove possible to regenerate damaged liver tissue using hepatocytes as a potential alternative to liver transplant. Another is the use of hepatocytes for toxicity screening of new drugs in clinical development. A method for differentiating hES cells into hepatocytes through the main developmental stages seen during normal development was recently reported.80 The researchers: 78 79 80 Metallo C et al, Methods Mol Biol, 585, 83, 2010 Niwa A et al, PLoS ONE 6(7), e22261, 2011 Touboul T et al, Hepatology, 51(5),1754-65, 2010 differentiated hES cells into a homogenous population of endoderm cells using a defined combination of factors (activin, fibroblast growth factor 2 and bone morphogenetic protein 4 together with phosphoinositide 3kinase inhibition) induced further differentiation of the endoderm cells into hepatic progenitors using another set of defined factors (fibroblast growth factor 10, retinoic acid, and an inhibitor of activin/nodal receptor) cultured the progenitors into mature hepatocytes that expressed markers typical of these types of cell and exhibited hepatic functions such as glycogen storage, cytochrome activity, and low-density lipoprotein uptake. Beta cells Another potential application for endoderm cells is to use them to derive the glucose-stimulated insulinproducing beta cells found in the pancreas. Type 1 diabetes is caused by the immune system mistaking beta cells as foreign invaders and attacking them. In humans, researchers have succeeded in using hES cells to derive endoderm cells and then differentiating these into foregut and pancreatic endoderm lineages, including immature pancreatic endocrine cells.81 More recently, glucoseresponsive insulin-producing cells with the capacity to correct induced hyperglycaemia have been derived from endometrial stromal stem cells in mice.82 The aim of research in this area is to find a reliable source of human beta cells that can be transplanted into type 1 diabetes patients. Strategies include developing robust differentiation pathways to derive mature beta cells from hES cells and from AS cells such as those found in the endometrium. Alternatively some research groups are looking at ways of trying to stimulated insulin production from the beta progenitor cells found in the pancreas. 81 82 Baetge EE, Diabetes Obes Metab. 2008 Nov;10 Suppl 4:186-94. Santamaria X, et al Molecular Therapy 19, 2065-2071 (2011) POST Report March 2013 Stem Cell Research Lung cells A final example of a potential application for endoderm cells is in the treatment of lung injury. The inner surface of the lung is lined with two types of alveolar epithelial cells. Alveolar type 2 (AT2) cells produce surfactants and also give rise to the AT1 cells that are responsible for gas exchange in the lung. Researchers have developed differentiation pathways to derive AT2 cells from hES cells. Furthermore, they have shown that the AT2 cells can reduce inflammation and improve survival when administered to mice with experimentally induced lung injury.83 A current research priority in this area is to develop a robust differentiation pathway to derive AT1 cells from AT2 cells. Mesoderm The mesoderm layer is located between the endoderm and ectoderm in the embryo. In the normal course of embryonic development different parts of the mesoderm give rise to different tissues and organs. For instance, the paraxial mesoderm goes on to form the kidney and body wall. The mesoderm thus gives rise to a very wide range of cell types. These include mesenchymal stem cells that have the potential to differentiate into: chondrocytes that make up cartilage osteocytes responsible for bone formation; myoblasts that give rise to muscle cells, including the cardiomyocytes found in the heart the cells that form and line the circulatory system heamoatopoietic stem (HS) cells found in bone marrow which produces the various different blood cells. Mesenchymal stem (MS) cells Human mesenchymal stem (hMS) cells have been widely studied as possible therapeutic agents. The diversity of sources and types of hMS cells means that it is difficult to generalise their properties. Pretty much all hMS cells are capable of differentiating into cartilage, muscle and bone cells. It is thought that some precursor cells found in the mesoderm can give rise to an even wider range of cell types, possessing haematopoietic (blood forming) and/or angiogenic (blood vessel forming) potential. Indeed, such precursor cells have been isolated from ES cells grown in culture.84 These cell types could potentially be used for blood transfusion and to analyse hematopoietic and vascular defects. Page 37 Interest in hMS cells for therapeutic purposes initially centred on them being an ethically acceptable and potentially safe85 source of cells for regenerative therapy. However more recent research has focused on their immunological properties. It has been well documented that hMS cells interact with local immune signals in the body and exert wide-ranging, mainly suppressive, effects on the immune system. They produce soluble factors that result in increased local production of anti-inflammatory factors such as cytokine interleukin (IL)-10 and other factors that suppress the proliferation of the cells of the immune system that normally orchestrate the immune response to foreign cells.86 hMS cells have several potential advantages for therapeutic applications. First, they may prove useful in treating immune disorders and in aiding the repair of injured tissue more generally. For instance, preclinical studies in animals have shown promising results in using MS cells to treat immune disorders such as systemic lupus erythematosus, rheumatoid arthritis, autoimmune type 1 diabetes and inflammatory bowel disease as well as in aiding tissue repair − or limiting tissue damage − following heart attack, in lung injury, bone fracture, skin wounds and spinal cord injury.87 As discussed in the next chapter some of these applications have been the subject of clinical trials. Second, MS cells appear to be able to avoid or suppress many of the immune responses that would normally attack and destroy foreign cells. However, the exact extent of their immunity to the immune system − known as immune privilege − is the subject of academic debate (see Box 5.4 in the next chapter). Nevertheless, if the immune privilege status of hMS cells can be established, this raises the possibility of being able to establish (allogeneic)88 hMS cell lines for clinical applications. 85 86 87 83 84 Wang D, et al, Mol Ther 18: 625–634, 2010 Vodyanik MA et al, Cell Stem Cell, 7(6): 718–729, 2010 88 As outlined in Chapter 2, hES cells form non-cancerous tumours called teratomas when injected into animals. hMS cells do not have this property. Griffin MD et al, Hum Gene Ther 21(12), 1641-55, 2010 Ren G et al, Stem Cells Translational Medicine, 1, 51–58, December 2011 As outlined in Box 4.5 allogeneic simply refers to using cells taken from one individual to treat another. POST Report March 2013 Stem Cell Research Page 38 A final property of MS cells that may prove therapeutically useful is their role in tumours. MS cells are known to be tumour-homing, preferentially migrating to tumours from distant sites. Once there, they have been implicated in a wide range of tumour support activities. However, their tumourhoming capabilities mean that they could potentially be used to deliver anti-cancer agents to the site of a tumour. A number of studies have used genetically modified MS cells to deliver anti-cancer agents to experimentally induced tumours in animal models89. To date such approaches have not been attempted in humans. FIGURE 4.2 DERIVING CARDIOMYOCYTES95 Sources of cardiomyocytes Most of the cells in the human heart are fully differentiated. The adult heart does contain a small population of cardiac progenitor cells, but these are insufficient to replace injured or dead cells following injury such as a heart attack.90 Much research on mesodermal cells has thus focused on the process by which mesoderm differentiates into the cardiomyocyte cells that comprise heart muscle. The hope here is to try and derive pure cultures of these cells to repair damaged tissue in the heart. A wide range of human tissues has been proposed as the source of stem cells to generate new cardiomyocytes91. These include pluripotent hES cells, fetal cardiomyocytes, umbilical cord-derived stem cells and multipotent adult stem cells such as cardiac progenitor cells, skeletal myoblasts, bone marrow-derived stem cells and adipose-derived stem cells. However, the differentiation potential of the multipotent stem cells found in adult and fetal tissue has proved to be controversial.92 To date, the only adult stem cells that have clearly been shown to have the potential to produce beating cardiomyocytes are cardiac progenitor cells.93 However, access to human tissue is limited and, as noted previously, the heart contains just a small population of progenitor cells. Researchers are currently trying to find ways of culturing cardiac progenitor cells in the lab to increase their number while retaining their multipotent state.94 89 90 91 92 93 94 MR Reagan and DL Kaplan, Stem Cells, 29, 920–927, 2011 Rajala K et al, Stem Cells International, 2011, 383709 Steinhauser ML and Lee RT, EMBO Mol Med 3, 701–712, 2011 Anversa P, et al Stem Cells. 25(3):589–601, 2007. Blin G, et al Journal of Clinical Investigation,120(4),1125–39, 2010 Rajala K et al, Stem Cells International, 2011, 383709 Several research groups have also shown that beating cardiomyocytes can be derived from pluripotent cells. These include hES96 and hiPS (discussed in a later section) cells. Three different methods have been developed including spontaneous differentiation from embryoid bodies and co-culture of hES cells with mouse cells that provide the various factors required. It is also possible to direct the differentiation of hES cells into cardiomyocytes through several stages using defined transcription factors. These various different stages mimic those observed in the normal development of the heart. These are illustrated in Figure 4.2, along with some of the factors thought to be involved. While the first step (mesoderm induction) is well documented, much less is known about subsequent steps in the process. 95 96 Adapted from Rajala K, et al Stem Cells International, 2011, 383709 Kehat I, et al Journal of Clinical Investigation, 108(3),:407–14, 2001; Xu C, et al Circulation Research, 91(6),501–08, 2002; He JQ, et al Circulation Research, 93(1), 32–39, 2002;. Mummery C, et al Circulation, 107(21), 2733–40, 2003. POST Report March 2013 Stem Cell Research One potential application for cardiomyocytes is to use them for screening of toxicity and efficacy of potential new drugs under clinical development. Indeed GE Healthcare, in collaboration with Geron, has developed a process for producing industrial quantities of cardiomyocytes from hES cells for just such purposes. But the main thrust of much research in this area remains the derivation of cardiomyocytes for repairing damaged tissue. Work done in rats has shown that transplantation of cardiomyocytes into damaged heart tissue in combination with insulin-like growth factor 1 (IGF-1) and a multi-component pro-survival cocktail results in the improvement of heart function.97 While several types of adult progenitor and stem cells have been used for cardiac repair in clinical trials in humans98 (see Chapter 5), no human trials have yet been conducted on cardiomyocytes derived from pluripotent stem cells. There are several key challenges to be resolved before clinical trials of cardiomyocytes derived from pluripotent stem cells are likely to be approved. First, researchers need to find a way of generating highly purified cell preparations that contain only the potentially therapeutic cardiomyocytes. A concern here is to exclude any of the original pluripotent stem cells from the preparation used for therapy, as these have the potential to form teratomas. Several strategies have been used to obtain enriched cardiomyocyte populations. Mechanical isolation of the cells by microdissection. Use of fluorescent dye to stain mitochondria in cell populations. Because cardiomyocyte cells contain many more mitochondria than hES cells, the extent of fluorescence can be used as the basis for cell sorting. Cell sorting based on the detection of cell proteins that are expressed on the outer surface of differentiated cardiomyocytes. Use of genetic selection techniques. This involves inserting a selection gene (such as an antibiotic resistance gene) into one of the regulatory sequences that is switched on when an hES cell differentiates into a cardiomyocyte. Subsequent exposure of the cells to the antibiotic will kill all the cells except those (cardiomyocytes) carrying the resistance gene. The down side of this approach is that it carries the usual risks associated with genetic modification. The upside is that it yields very pure cell populations. 97 98 Laflamme et al., 2007). Wollert K and Drexler H, Nature Reviews Cardiology 7, 204-215, 2010l Page 39 A second challenge is to gain a better understanding of the maturation process. A comparison of cardiomyocytes derived from pluripotent stem cells with those found in adult heart tissue shows that they share many of the same characteristics. However, in terms of appearance and functional capacity, the cells derived from pluripotent stem cells more closely resemble immature cardiomyocytes. Further research is thus needed to understand how to obtain mature pluripotent stem cell-derived cardiomyocytes in culture. Further challenges regarding the use of cardiomyocytes from pluripotent stem cells in clinical trials concern: the method, site and timing of delivery of the cells the optimum dose of cells the persistence and survival of the cells after transplantation integration of the cells into the patient’s heart the avoidance of immune rejection. Haematopoietic stem (HS) cells Sources of HS cells include bone marrow, peripheral (circulating) blood and umbilical cord blood. Blood from such sources contains a mixture of different types of cells including: the full range of blood cell types progenitor cells that can proliferate but can only give rise to a limited subset of blood cell types short-term progenitor cells that can give rise to the full range of blood cell types but which cannot themselves proliferate in the long-term HS cells that can proliferate over the lifespan of the organism in questions and give rise to the full range of blood cell types. HS cells could potentially have a wide range of clinical applications. For instance they are used to repopulate the bone marrow of leukaemia patients following intensive chemotherapy and could be used as alternative source of blood for transfusion. However, researchers trying to isolate HS cells from the above sources face three major problems: HS cells are present only in very low numbers it is very difficult to distinguish HS cells from other blood and progenitor cells it is very difficult to expand HS cell numbers outside of the human body, a factor which currently limits the therapeutic potential of such cells beyond procedures such as direct bone marrow transplantation. Page 40 Recent years have seen some progress made towards resolving some of these problems. One way of distinguishing HS cells from other types of blood cells is by the marker proteins found on the outer surface of the cells. By making antibodies that bind to specific marker proteins, researchers were able to use cell sorting techniques to derive different subsets of cells, each with a different pattern of marker proteins. They were then able to grow the cells in culture and look at the range of cells each were able to differentiate into. Using such techniques researchers have managed to disentangle the hierarchy of cells involved in blood formation (Figure 4.3, next page). At the top of the hierarchy are very small numbers of HS cells, which are capable of long-term self-renewal. In the middle, are a series of multipotent and oligopotent progenitors that can give rise to a variety of different blood cells but which lack the capacity for long-term self-renewal. At the bottom are the lineage restricted progenitors that can each give rise to just a single, specialised form of blood cells. Each of the different types of cells shown in Figure 4.3 is characterised by a specific pattern of surface protein markers, although the details have been omitted from the Figure for the sake of clarity.99 HS cells are already used in clinical applications (see Chapter 5). The development of cell selection and sorting techniques has the potential to significantly enhance current approaches. For instance cell selection and sorting methods may give clinicians the tools needed to selectively remove the T cells responsible for GVHD and enhance those that cause beneficial effects such as GVT (see Box 4.6).100 Ectoderm At an early stage of embryonic development, the ectoderm gives rise to three distinct regions (see Figure 4.4, right). Non-neural ectoderm (blue in Figure 4.4), which gives rise to the epidermis. Neuroectoderm (yellow) which forms the neural plate that folds on itself and gives rise to the neural tube that will eventually develop into the structures of the central nervous system. Border regions (green) between these two, most of which will form the neural crest when the neural tube is formed. Neural crest cells detach themselves from the neural crest itself and migrate throughout the developing embryo, giving rise to a very wide range of different cell types. 99 100 Weissman IL and Shizuru JA, Blood, 112(9): 3543–3553, 2008 Riddell SR and Appelbaum FR, PLoS Med 4(7), e198, 2007 POST Report March 2013 Stem Cell Research FIGURE 4.4 NEURAL TUBE FORMATION As illustrated in Figure 4.4, the process is orchestrated by two main transcription factors: bone morphogenic protein 4 (BMP) and sonic hedgehog (SHH). BMP is secreted by the non-neural (blue) ectoderm but its secretion is suppressed in a medial/lateral (middle to left and right) axis. Low levels of BMP in the middle of the ectoderm direct its fate to a neural (yellow) lineage. Moderate levels of BMP between the middle and sides direct the ectoderm to become the border regions (green). Sonic hedgehog is secreted by the notochord, a structure that sits underneath the ectoderm. SHH forms the dorsal/ventral (top to bottom) axis and drives formation of the floor plate (red). As the neural tube develops, the two (green) border regions fuse to form the neural crest and close the neural tube. At this point the medial/lateral BMP axis has become a dorsal/ventral one. This results in two opposing gradients along the length of the neural tube: a high at the top, low at the bottom BMP gradient (purple triangle in Figure 4.4); and, a high at the bottom, low at the top SHH gradient (red triangle). These two opposing gradients cause a patterning of the neural tube into different domains (represented by the coloured areas in Figure 4.4), each of which will go on to give rise to different components of the central nervous system. POST Report March 2013 Stem Cell Research Page 41 Figure 4.3 The hierarchy of intermediate cell types in blood formation Source: Adapted from Weissman IL and Shizuru JA, Blood, 112(9): 3543–3553, 2008 Non-neural ectoderm Non-neural ectoderm include keratinocytes, which are major components of the skin, and the retinal pigment epithelial cells which are important components of the retina in the eye. From a clinical point of view, keratinocytes are of interest because of their potential applications in wound healing. Research has shown that hES cells can be directed down the ectoderm route by using just two factors: Retinoic acid, which is a derivative of vitamin A that has been shown to be an important determinant of ectodermal fate in simple model organism such as the zebrafish.101 Bone morphogenic protein 4 (BMP) is a protein found in humans that is part of a larger family of growth and differentiation factors. Localised suppression of the BMP signal is one of the factors responsible for the emergence of the neural plate and neural plate border regions. A recent paper has reported a robust protocol using these two factors to obtain relatively pure keratinocyte progenitors from hES cells.102 The researchers showed that the derived keratinocyte progenitors: retained the capacity to fully differentiate into keratinocytes expressed cell markers typical of keratinocytes did not express cell markers typical of nonectodermal lineages could be maintained in culture without any deterioration in the appearance of the cells or of their chromosomes (karotype). In addition to potential therapeutic applications, the derived keratinocyte progenitors can be used to construct models of complex tissue such as skin. For instance, researchers have used ectodermal cells in conjunction with fibroblasts to produce skin models to investigate how the different cells communicate with, and support each other.103 102 101 Bakkers J et al, Dev Cell, 2, 617–27, 2002 103 Metallo CM et al, Methods Mol Biol, 585, 83, 2010 Hewitt KJ et al, Tissue Eng Part A, 15, 3417-26, 2009 POST Report March 2013 Stem Cell Research Page 42 Loss and dysfunction of the retinal pigment epithelium is of clinical interest because it can lead to age-related macular degeneration (AMD). AMD is one of the leading causes of human blindness and there is considerable interest in using retinal pigment epithelial cells derived from hES cells to treat it (see Chapter 5). Research has shown that the conversion process is enhanced by co-culturing hES cells with human retinal pigment epithelial cells or with other human derived components.104 Animal studies have shown that transplanted retinal epithelium can support photoreceptor survival and restore visual function in animals with degenerated retinal pigment epithelium.105 As discussed in Chapter 5, preparatory work has been conducted to clear the way for clinical trials in humans. Another possible application for hES cell-derived retinal pigment epithelial cells is in patients suffering from acute retinal tear. This condition results in the loss of retinal pigment epithelial cells and can cause complete loss of vision within the space of six weeks. Neural crest stem (NCS) cells In the embryo, the neural crest is a source of migratory cells that will eventually differentiate into a diverse range of cell types including bones, cartilage, neurons and their supporting glial cells, endocrine cells, vascular smooth muscle cells and the pigment-producing melanocytes. This diversity has made NCS cells a potential target for researchers looking for sources of multipotent cells for research and potential clinical applications. There are several potential sources of NCS cell progenitors in the adult human body. For example, these types of cells are found in hair follicles, in the gastro intestinal tract as well as in various parts of the central nervous system such as the sciatic nerve and the spinal ganglia. Of these, perhaps the best studied are the epidermal NCS derived from the bulge of hair follicles.106 Research has shown that such cells have the potential to generate all of the major neural crest derivatives, are capable of selfrenewal, and can be derived and cultured in a robust and reproducible fashion in the laboratory.107 Moreover, epidermal NCS cells have other features that make them promising candidates for possible clinical use, particularly in autologous therapy (Box 4.3). For instance, they are readily accessible using minimally invasive techniques and do not cause teratomas when injected into mice. One example of a possible clinical application for NCS cells is neurosensory hearing loss, a common condition that has major social and economic impacts. It is caused by damage to the auditory hair cells and their associated neurons. Several cell types have been explored as being therapeutically suitable for this condition, including NCS cells.108 NCS cells have also been investigated as possible treatments for neurodegenerative conditions such as Parkinson’s and Alzheimer´s disease.109 Directing hES cells to neural lineages Another potential source of NCS cells is to obtain them from hES cells via directed differentiation. For example, recent research has shown that NCS cells can be derived from hES cells using a combination of growth factors in medium conditioned on stromal cells.110 The resulting NCS cells were purified by fluorescence-activated cell sorting, cultured and shown to express cell markers characteristic of NCS cells. The researchers were able to further differentiate the NCS cells into a variety of neurons and glial cells of the peripheral nervous system, as well as other cell types. Using a defined medium, they generated a nearly pure population of glial cells. These supporting cells were able to form a sheath around the ganglia of rat neurons when the two cell types were mixed in the laboratory. This finding suggests that such cells may be used for tissue engineering. 106 107 108 104 105 Gong J et al, Exp Eye Res. 2008 Jun;86(6):957-65 Coffey PJ et al, Nat Neurosci, 5, 53-56, 2002 109 110 Sieber-Blum M at al, Molecular And Cellular Neurosciences, 32, (12), 67-81, 2006 Clewes O et al, Stem Cell Reviews, 7 (4) 799-814, 2011 Huisman MA & Rivolta MN, Front Biosci, 1 (4), 121-32, 2012 Achilleos A & Trainor PA, Cell Research 22, 288-304, 2012 Liua Q et al, Stem Cells Trans Med, 2011-2042, April 2012 POST Report March 2013 Stem Cell Research Other studies have focused on understanding the many different kinds of neurons involved in the complex interconnections of the human central nervous system. hES cells have become a powerful tool in the field of developmental neurobiology as they provide researchers with experimental access to the developing human nervous system. The focus of much research in this area has been on the generation of the neurons of the midbrain subtype that are the main source of the signalling molecule dopamine. It is the loss of these dopamine producing neurons that is associated with one of the most prominent human neurological disorders, Parkinson’s disease. Ultimately, the goal of research in this area is to develop an effective cell therapy to replace the dopamine producing neurons in patients with the disease. Protocols for deriving dopamine producing neurons from hES cells have been established. For instance, researchers have shown that it is possible to derive midbrain neural precursor cells from hES cells and use these to obtain an enriched population of dopamine producing neurons.111 However, a major drawback with these neural precursor cells is that it is difficult to derive large numbers of dopamine producing neurons from them, and those neurons that are produced do not survive very long when transplanted into animals. Researchers have found that the cell survival problems can be overcome by genetically modifying the cells to overproduce levels of two transcription factors.112 But the genetic modification of cells raises additional risks that need to be considered before using such cells in clinical trials in humans. More recently, researchers have used small molecules (see next section) to direct differentiation of hES cells down a different pathway to derive dopamine producing neurons.113 The process yields larger numbers of neurons that can be maintained in culture in the laboratory for several months. Furthermore, the dopamine producing neurons showed long-term survival when engrafted into three different animal models of Parkinson’s disease (mice, rats and monkeys). The cells also showed functionality by improving performance in two of the models (mice and rats). 111 112 113 Ko J-Y et al, Molecular Therapy 17 (10), 1761–70, 2009 The two transcription factors are sonic hedgehog and Bcl-XL, a protein that has been implicated in the survival of cancer cells. Kriks S et al, Nature, 480 (7378), 547-51, 2011 Page 43 Other key research targets involve deriving neural progenitor cells for selective differentiation into neurones that produce other important signalling molecules in the brain such as serotonin, acetylcholine and GABA (gamma aminobutyric acid). Various studies have reported deriving neural precursor cells capable of differentiating into different neuronal subtypes using defined culture conditions.114 More recently, researchers have derived GABA producing spinal cord neurones from hES cells exposed to retinoic acid and SHH. When these cells were transplanted into a mice model of Huntington’s disease, the cells survived transplantation, reconnected circuitry in the inner part of the forebrain (striatum) that is most affected by the disease and improved the mice’s performance in behavioural tests.115 In the last 10 years, hES cells have emerged as a means of deriving better models of neurodegenerative diseases. For example, recent research outlined in Box 4.7 has paved the way towards developing better models of the various different forms of motor neurone disease. hES cells have proved to be an invaluable resource for furthering understanding of the development of the central nervous system, and for developing better models of the diseases that affect it. However, a range of issues will need to be resolved before cell-based therapies can be developed for such diseases. These include: The extent to which therapeutic cells actually resemble the cells being regenerated. For example, the dopamine producing neurons derived from hES cells express some of the key markers typical of midbrain neurons, but it is not clear whether they produce all of them.116 How the cells behave after they have been transplanted. Questions here include whether the cells become integrated into local neural networks or migrate to other locations. The optimal source of cells and stage of development for transplantation. 114 115 116 . Erceg et al, PLoS ONE, 3(5), e2122, .2008 Ma L et al, Cell Stem Cell, 10 (4), 455-64, 2012 Zeng X et al, Stem Cells, 22(6), 925-40, 2004 POST Report March 2013 Stem Cell Research Page 44 Box 4.7 Stem cell models for motor neurone disease Motor neurone disease (MND) is a generic term used to describe several diseases caused by degeneration of the motor neurones in the brain and spinal cord. It encompasses: amyotrophic lateral sclerosis (ALS) progressive muscular atrophy (PMA) progressive bulbar palsy (PBP) primary lateral sclerosis (PLS) spinal muscular atrophy (SMA) A key aim of research on these diseases has been to develop accurate disease models. Two recent advances in stem cell research have made important contributions towards this. In the first, researchers have discovered a novel pathway to direct neural precursor cells derived from hES cells towards a wide variety of different sub-types of motor neurones.117 The ability to manipulate motor neurone subtype could eventually lead to more accurate, clinically relevant disease models. These can be used to build up a better understanding of the underlying mechanisms behind the various diseases, and as a means of testing potential new drugs. In the second, researchers have managed to derive a stem cell line that carries one of the key mutations linked to ALS. Studies of inherited ALS had implicated a mutation in the gene coding for a protein called TDP-43. This protein is normally found in the nucleus of motor neurone cells. In many ALS patients however, a key feature of disease progression is a build-up of an abnormal form of TDP-43 in the cytoplasm surrounding the nucleus of the motor neurone cells. The researchers took skin cells from a patient with an inherited form of ALS and used them to derive iPS (induced pluripotent stem) cells that carried the TDP-43 mutation.118 They used the iPS cells to derive neurones and functional motor neurones and showed that the cells accumulated the abnormal TDP-43 protein and had decreased survival rates over time. Again it is hoped that these cells will lead to better models for studying progression of the disease and for screening potential drugs. 4.4 Reversing differentiation: iPS cells The discovery of induced pluripotency is based on a number of key advances: the demonstration by somatic cell nuclear transfer that differentiated cells retain the same genetic information as early embryonic cells (see Chapter 2) the development of techniques that allowed researchers to derive, culture, and study pluripotent cell lines the observation that transcription factors are key determinants of cell fate whose enforced expression can switch one cell type into another. 117 118 Patani R et al, Nature Communications, 2, 214, 2011 Bilican B et al, 2012, www.pnas.org/content/early/2012/03/20/1202922109.full.pdf+html Induced pluripotent stem (iPS) cells were first derived in 2006 (see Chapter 2). Researchers identified a cocktail of four transcription factors that could convert (fully differentiated) mouse fibroblast cells back into a pluripotent state.119 The four factors were: Oct 4 and Sox 2, which were discussed earlier in the context of maintaining pluripotency in ES cells. Klf4 (Krupple like factor 4) one of a series of closely related proteins that are known to play a role in cell proliferation, differentiation and survival, especially in the context of cancer. c-Myc, a gene coding for a transcription factor that is known to regulate the activity of a wide range of other genes and that has been implicated in important cellular processes such as cell proliferation and cell growth. The researchers found that inserting a viral vector containing the genes coding for these four transcription factors into mouse fibroblast cells could induce developmental reprogramming of some of the cells into pluripotent stem cells. Only a very small proportion of the cells treated in this way were reprogrammed. By culturing these cells under embryonic stem (ES) cell conditions the researchers were able to derive iPS cells that closely resembled hES cells. Within a year researchers had shown that the same four factors could be used to reprogram human120 fibroblasts into iPS cells. Other research groups reproduced the findings and devised reprogramming protocols using different transcription factors. For instance, one group used a combination of Oct 4, Sox 2, Nanog (all key factors in maintaining pluripotency) and Lin 28 (a marker of undiffentiated hES cells) to derive iPS cells from human somatic cells.121 This research prompted a huge amount of interest. It was not the first time that adult (differentiated) cells had been reprogrammed; this had already been achieved using cell nuclear transfer (Chapter 2). But it was the first time that reprogramming had been achieved using defined factors. In theory at least, human iPS cells offer a number of potential advantages. They could be used: to derive hES-like cells without requiring human the use of embryos to develop better models of disease for research purposes (for instance the iPS cells containing a mutation linked to one of the main motor neurone diseases outlined in Box 4.7) 119 120 121 Takahashi K & Yamanaka S, Cell 126 (4): 663–76, 2006. Takahashi K. et al, Cell, 131(5), 861-72, 2007 Yu J et al, Science, 318 (5858), 1917-20, 2007 POST Report March 2013 Stem Cell Research to use the disease models to screen for potential new drugs for therapeutic purposes since deriving iPS cells from a patient’s own cells should minimise concerns about immune rejection. Page 45 FIGURE 4.5 STEPS IN REPROGRAMMING124 However, a key question here is: how similar are iPS cells to ES cells? This is important because before they can be considered for use in clinical trials in humans, researchers need to be confident that iPS cells will behave in a stable and predictable manner and will not revert back to their original (differentiated) state. In order to answer this question, researchers have been trying to get a better understanding of the reprogramming process. This is discussed in the following section. The reprogramming process One of the interesting features of the reprogramming process is its inefficiency. Only a small proportion of the cells expressing the cocktail of transcription factors are converted into iPS cells. Even where this does occur, the conversion is a slow process taking one to two weeks.122 Various hypotheses have been advanced to account for this inefficiency. One suggestion was that not all of the treated cells expressed appropriate levels of all of the reprogramming factors. Another was that only a small subset of the starting cell population − for example cells not yet committed to a particular lineage or adult stem cells − are able to undergo reprogramming. A third theory was that reprogramming depended on whereabouts in the cell genome the viral vector carrying the four factors inserts itself. Each of these theories has been investigated and the available evidence does not support any of them.123 Rather it is now thought that reprogramming involves a series of steps, as shown in Figure 4.5. While most of the starting cells may begin the reprogramming process, only a small proportion successfully complete all of the main steps to become fully reprogrammed iPS cells. The barriers to achieving successful completion of each step are thought to be mainly epigenetic (see Box 4.1) in nature. 122 123 Hanna J et al, Nature, 462, 595–601, 2009 Plath K and Lowry WE, Nat Rev Genet, 12(4), 253–265, 2011 As outlined in Figure 4.5, successful reprogramming requires the completion of at least three main steps. Evidence for this comes from imaging studies that can retrospectively piece together the path followed by cells that successfully complete the reprogramming process. In the early phase, the starting cells (usually fibroblasts) start to proliferate and change in appearance, becoming rounder. Following the mid-phase clusters of round cells are apparent and the cells have completed the transition from one cell type (mesenchymal in the case of fibroblasts) to another (epithelial cells). Finally, after the late phase, distinct colonies of iPS cells are apparent. 124 Adapted from Plath K and Lowry WE, Nat Rev Genet, 12(4), 253– 265, 2011 POST Report March 2013 Stem Cell Research Page 46 Studies of cells that only make it part of the way through this process have started to reveal what is going on at a molecular level. The early phase is characterised by the silencing (down regulation) of fibroblast-specific genes and the reawakening (up regulation) of genes for cell proliferation and DNA replication. During the middle phase, epithelial genes are up regulated as are some of the markers that are specific for ES cells. The late stage involves the activation of the remaining pluripotency genes such as Nanog. These events are orchestrated by the reprogramming factors through their actions on an array of other transcription factors and epigenetic mechanisms, such as changes to the histone proteins that are associated with DNA (see Box 4.1). Also shown in Figure 4.5 are a population of cells known as pre-IPS cells that are only partially reprogrammed. These cells have silenced many of the genes responsible for their previous differentiated state and acquired many of the properties of pluripotent ES cells. But they have fallen at the final hurdle by failing to reawaken the full network of pluripotency genes. Pre-iPS cells can be isolated from a population of treated cells, grown in culture and used to study the late phase of the reprogramming process. For instance, it has been observed that different types of starter cell give rise to pre-IPS cells that have all stalled at the same phase of the reprogramming process.125 Research is currently underway to identify the exact nature of this common stumbling block. A number of research groups have reported that treatment of pre-iPS cells with various small molecules can cause them to give rise to fully reprogrammed cells that express the full range of pluripotency genes. Comparing ES and iPS cells Research on the reprogramming process has informed the debate on how similar iPS cells are to ES cells derived from embryos. On the face of it, fully reprogrammed iPS cells appear very similar to embryo-derived ES cells. However, researchers have used a number of techniques to compare the cells at the molecular level and these include comparisons of: Messenger RNA (mRNA) expression. This assesses what genes are active and which proteins are likely to be made. Expression patterns of other RNA sequences (miRNA and lincRNA) that do not code for proteins but that play a role in gene regulation and reprogramming. 125 Mikkelsen TS et al, Nature;454, 49–55, 2008 TABLE 4.1 COMPARISON OF IPS AND ES CELLS126 Characteristic mRNA expression patterns miRNA expression patterns lincRNA expression patterns DNA methylation patterns Histone modification Metabolic profile iPS versus ES cells iPS cells have distinct patterns straight after reprogramming. Patterns are identical/near identical once iPS cells have been cultured for extended periods. Applies to mouse and human cells. Some miRNA not expressed in most mouse iPS cells. Differences described in human iPS cells but these are not consistent. Not studied in mice. Differences found in human iPS cells, some lincRNA known to play a role in reprogramming. Mouse iPS cells have distinct patters straight after reprogramming. Patterns are identical/near identical once iPS cells have been cultured. Human iPS cells are more variable in their methylation patterns than human 127 ES cells. The two modifications studied in mice were identical. In humans, three modifications were studied: two were identical, one was different. Not studied in mice. Identical/nearly identical in humans. Imprinting patterns of the DNA and its associated proteins (histones). These are important because DNA methylation and histone modification are both mechanisms for regulating gene expression (see Box 4.1). Metabolic profile of the cells. This reveals what chemical processes are active in the cells. The results of such studies are summarised in Table 4.1 for ES and iPS cells in both humans and mice. They suggest that for both mice and human cells, iPS cells retain an ‘epigenetic memory’ of their starting cells when compared to embryo-derived ES cells. For some characteristics this memory appears to be transient. For instance in both humans and mice, iPS cells show mRNA expression patterns that share some characteristics of the starting cells − and are distinct from the respective ES cells − when studied immediately after the reprogramming process has finished. However these distinct patterns have faded after the iPS cells have been cultured for some time. 126 127 Adapted from Plath K and Lowry WE, Nat Rev Genet, 12(4), 253– 265, 2011 Bock C et al, Cell, 144, 439–52, 2011 POST Report March 2013 Stem Cell Research A similar phenomenon is seen in the DNA methylation patterns of mice iPS cells. Immediately after reprogramming the cells exhibit methylation patterns that share some characteristics with the starting cells. However after culturing, the iPS cells’ methylation patterns more closely resemble those of mice ES cells.128 The DNA methylation patterns in human ES and iPS cells are more variable. A recent study looked at 20 different human ES cell lines and 12 human iPS cell lines.129 It found considerable variation in the methylation patterns between different ES lines, between iPS lines and between ES and iPS lines. The study concluded that the human iPS cells showed more variation at the molecular level than human ES cells. Other differences between iPS cells and ES cells have also been reported (see Table 4.1). These include differences in miRNA in both human and mice studies and differences in lincRNA and histone modifications in human studies. There is also evidence of functional differences between hiPS cells and hES cells. For instance a recent study showed that hiPS derived from insulin-producing beta cells were more likely differentiate into insulinproducing cells when compared with hES cells.130 Overall, iPS cells look and behave in a very similar fashion to embryo-derived ES cells. They are capable of self-renewal, are pluripotent and have similar patterns of gene expression. However, when studied at the molecular level, there is evidence of subtle differences between iPS and ES cells. In particular, iPS cells appear to retain an epigenetic memory of their former state. For some characteristics there is some evidence that this may be a temporary phenomenon that fades once the cells have undergone several rounds of cell culture. The significance of these small molecular differences between iPS and ES cells is currently the subject of much debate. On the one hand, the differences are very small, and do not appear to affect the overall appearance or behaviour of the cells. On the other hand, very small molecular changes are known to have a very big impact on the developmental fate of cells. Further research on the functional significance of the observed differences between ES and iPS cells is thus needed before iPS cells can be used for therapeutic purposes. This is discussed in more detail in Chapter 6. Page 47 Box 4.8 Reprogramming using small molecules To date, protocols for achieving cell reprogramming involve inserting genes coding for the chosen reprogramming factors into the starting cells. This is because the reprogramming factors are large molecules (proteins) and the best way of getting large molecules inside cells is to manufacture them in situ using genes. However such an approach has several disadvantages: It involves genetic manipulation of the starting cells and any modifications made will persist in the resulting iPS cells. This raises additional regulatory concerns and may limit the clinical usefulness of iPS cell lines. Some of the protocols involve inserting gene sequences into the DNA of the starter cell. Such methods raise additional risks of introducing mutations into the starting cells if the site of insertion is a functionally important DNA sequence. Non-insertional protocols have been developed, but are generally less efficient. Some of the reprogramming genes have the potential to cause cancer (they are so-called oncogenes) and are thus not suitable for clinical applications. One approach would be to replace the genes with purified copies of the proteins they code for. Such a protocol has been developed and used to successfully reprogram somatic cells into iPS cells.131 However, the efficiency of this method is low. Another approach is to replace each of the reprogramming factors with small molecules. This would allow cell reprogramming under chemically defined conditions and would obviate the need for genetic modification. The principle of such an approach has already been proven. For instance in 2009, researchers showed that the gene for Sox 2 could be replaced by a small molecule that inhibited one of the key signalling pathways involved in the reprogramming process.132 More recently, researchers have developed a protocol where three of the four reprogramming factors have been replaced by small molecules.133 The one remaining gene for which a small molecule substitute has yet to be found is the Oct4 gene. Research has already demonstrated that replacing or augmenting some of the genes with small molecules can also greatly increase the efficiency of the reprogramming process. The Holy Grail for research in this area is to develop a protocol that uses a defined cocktail of small molecules to achieve reprogramming at much higher efficiency than is currently possible. Another main target for researchers is to refine the reprogramming protocols. A key aim here is to develop protocols that are more efficient than current ones and that do not involve inserting genes into the starter cells. Some recent developments are outlined in Box 4.8. The disadvantages outlined in Box 4.8 limit the clinical usefulness of current iPS cell lines. However, they have the potential to be a valuable research tool for the study of normal cell development and for disease-modelling. This is discussed in the next section. 131 128 129 130 Polo JM et al, Nature Biotechnology,28, 848–55, 2010 Bock C et al, Cell, 144, 439–52, 2011 Bar-Nur O et al, Cell Stem Cell 9, 17–23, 2011 132 133 Zhou H et al, Cell Stem Cell 4 (5): 381–84, 2009 Li W and Ding S, trends in Pharmacological Sciences, 31 (1), 3645, 2009 Zhu S et al, Cell Stem Cell, 7 (6), 651-55, 2010 POST Report March 2013 Stem Cell Research Page 48 FIGURE 4.6 IPS CELLS AS DISEASE MODELS134 Oct 4, Sox 2, Klf 4, cMyc Cells from patient Reprogramming Directed differentiation Compound screening (chemicals, proteins, miRNA) Disease models Better understanding of disease mechanisms iPS cells in disease-modelling In addition to being an exciting research tool to probe mammalian development and epigenetic reprogramming, iPS cells have great potential as a system to model human diseases. iPS cells can be generated from skin biopsies or blood samples of patients. They can then be differentiated in the laboratory to give rise to cell types that are: not easily accessible in patients, such as neurons and cardiomyocytes, and/or the cell types affected by the disease in question. The iPS cells and the differentiated cell types derived from them should retain the genetic information from the original patients, including any genetic factors implicated in causing the disease in the first place. By studying disease models derived in this way, researchers can better understand the underlying mechanisms behind the disease. This may lead to the identification of possible new therapeutic agents and these can be screened for efficacy using the disease model. The process is outlined in Figure 4.6. 134 Adapted from Unternaehrer JJ and Daley GQ, Phil Trans R Soc B, 366 (1575) 2274-85, 2011 iPS cells have now been derived as potential models for a wide range of different diseases (see Table 4.2). A key question in such models is whether the iPS cells and the differentiated cells derived from them recapitulate some of the diseasespecific characteristics. This has been demonstrated for some, but not all, of the disease models developed so far. For example, of the disease models listed in Table 4.2, only 12 have successfully shown that a disease characteristic is present in the differentiated cells of interest. In some cases this was because the researchers did not investigate the characteristics of the derived cells. An example where disease characteristics have been demonstrated in iPS cells and the differentiated cells derived from them is amyotrophic lateral sclerosis (see Box 4.7). Another is iPS cells generated from patients with spinal muscular atrophy, a disease caused by mutations in the survival motor neuron 1 (SMN1) gene. When the iPS cells are differentiated into motor neurons, researchers have been able to demonstrate that the motor neurons show deficits that reflect some of the defects seen during the development of the disease.135 Such disease models therefore have the potential to be used to screen for possible new therapeutic agents. However, iPS cells are not always the best available disease models. Two examples of diseases where iPS cells may not yield appropriate models are: Fanconi anaemia, a genetic syndrome that involves failure of the bone marrow Fragile X syndrome, an inherited form of mental retardation. In the case of Fanconi anaemia, the nature of the condition itself precludes cell reprogramming. Attempts to reprogram fibroblasts or keratinocytes from patients suffering from the condition have proved unsuccessful. It appears that the pathway affected by the disease is itself needed for the reprogramming process.136 Researchers have thus developed a disease model using hES cells which have had the key genes that cause the disease inactivated. 135 136 Ebert AD et al, Nature, 457, 277-80, 2009 Raya a et al, Nature 460, 53-59, 2009 POST Report March 2013 Stem Cell Research TABLE 4.2 iPS CELL DISEASE MODELS137 Neurological diseases Amyotrophic lateral sclerosis Spinal muscular atrophy Parkinson disease Huntington disease Down’s syndrome Fragile X syndrome Familial dysautonomia Haematological diseases ADA‐SCID Fanconi anaemia Scwachman‐Bodian‐Diamond syndrome Sickle cell anaemia Beta thalassemia Polycythemia vera Primary myelofibrosis Metabolic diseases Lesch‐Nyhan syndrome Diabetes type 1 Gaucher disease type 3 Alpha 1‐antitrypsin deficiency Glycogen storage disease type 1a Familial hypercholesterolemia Crigler‐Najjar syndrome Hereditary tyrosinemia type 1 Progressive familial hereditary cholestasis Hurler syndrome Cardiovascular diseases LEOPARD syndrome Long QT syndrome Arrhythmogenic right ventricular cardiomyopathy Supravalvular aortic stenosis Dilated cardiomyopathy Other diseases Duchenne muscular dystrophy Becker muscular dystrophy Dyskeratosis congenital Cystic fibrosis Scleroderma Osteogenesis imperfect In the case of fragile X, it is possible to obtain iPS cells from patients but the cells are not an adequate model of the disease. Fragile X is caused by an accumulation of short repeat gene sequences in the promoter region of a specific gene on the X chromosome. The gene is active early on in development, but the build-up of repeat sequences leads to it being inactivated. Researchers thus want a model in which to study the accumulation and inactivation processes. In iPS cells from patients with fragile X, the gene of interest is already inactivated. In other words, the reprogramming process has failed to reactivate it.138 For this disease, an hES cell line derived from an embryo diagnosed with fragile X syndrome has proved to be a better disease model. 137 138 Adapted from Unternaehrer JJ and Daley GQ, Phil Trans R Soc B, 366 (1575) 2274-85, 2011 Urbach A et al, Cell Stem Cell, 6, 407-11, 2010 Page 49 Other conditions that are challenging to model include diseases of aging such as Parkinsons and Huntingtons. This is because the differentiated cells derived from iPS cells have a limited lifespan, which makes it difficult to model the disease characteristics over the required timeframe. Better models for these conditions may depend on developing ways of mimicking ageing of the cells. In addition to ensuring that iPS cells reflect features of the disease they are being used to model, several other challenges regarding iPS cells as well as hES cells need to be addressed. These include: The lack of robust, lineage-specific, differentiation protocols to generate the large quantities of cells needed for screening. Although significant advances have been made to direct the differentiation of ES cells and iPS cells into certain types of neurons, cardiomyocytes, blood and pancreatic cells, none of these protocols generate cell populations of the required purity. Current differentiation protocols tend to produce immature cell populations rather than fully mature adult cells. Variation in the ability of different iPS cell lines to differentiate into different cell types. This might reflect variations in the starting cells or in the reprogramming process. Page 50 POST Report March 2013 Stem Cell Research POST Report March 2013 Stem Cell Research 5 Page 51 Clinical Developments Overview Numerous clinical trials have investigated the therapeutic use of a patient’s own cells to treat a range of different diseases (autologous therapy). Some such trials have shown evidence of clinical benefit but there is a need for bigger trials to optimise factors such as cell type and dose, timing and administration. Trials using fetal stem cells or hES cells (allogeneic therapy) have recently started. Concerns over immune rejection mean that allogeneic approaches are largely confined to sites of the body where the immune system is largely suppressed. 5.1 Stem cell therapies Ultimately the aim of stem cell research is to develop better treatments for use in the clinic. Various different approaches are possible: Cell therapy, where cells of various types are administered to the body. In some cases the aim is that the cells regenerate a tissue that is diseased or damaged. In other cases the aim may be to limit tissue damage by ‘damping down’ the body’s immune response to a trauma. Tissue engineering, where cells are used in conjunction with a matrix or scaffold to reconstruct damaged or diseased tissue. Perhaps the best known example of this type of therapy was the use of epithelial cells and cartilage cells to tissue engineer a new section of trachea for a patient in Barcelona whose airways had been severely damaged by tuberculosis (see Box 5.1). Using stem cells as a vehicle for delivering gene therapy. An example of this approach is treatment of a particular form of severe combined immune-deficiency (SCID) with stem cells that have been genetically modified to contain a good copy of the gene implicated in this type of the disease (Box 5.2). The cells are used to repopulate the patient’s bone marrow and restore his or her immune response. This Chapter will focus on the first of these various different approaches, cell therapy. If new, cellbased therapies are going to make it into clinical use, they must first be tested in clinical trials to prove their safety and efficacy. Before giving permission for an early stage clinical trial, regulators need data from pre-clinical studies to show that the treatment is safe and potentially effective. The four basic phases of clinical trials were summarised in Chapter 3 (see Box 3.2), with the early stages (phase I) being largely concerned with demonstrating safety and the later phases (III) focusing more on establishing efficacy. Box 5.1 Tissue engineered windpipe139 In March 2008, Claudia Castillio, a 30 year old Colombian woman was admitted to hospital in Barcelona suffering from collapsed airways following a severe case of tuberculosis. Previous attempts to surgically replace large airways have proved unsuccessful; the only conventional option for such patients is to remove the affected lung and airway. However, the doctors offered to try and tissue engineer a new section of trachea. A scaffold was prepared by Italian scientists in Padua who took a section of trachea from a donor and removed all of the living cells by a process involving 25 washing cycles. Two types of cell were used to line this scaffold to make it biocompatible with the patient: epithelial cells taken from the patient’s trachea were used to line the inner surface of the scaffold chondrocytes (cartilage cells) derived from stem cells from the patient’s bone marrow lined the outer surface. The cells were cultured at the University of Bristol, and flown to Barcelona where scientists reseeded the cells onto the scaffold. Spanish doctors extracted the damaged section of trachea from the patient and replaced it with the tissue engineered section in June 2008. No immune-suppression was required because the cells used to tissue engineer the scaffold came from the patient herself. Within two months of the operation the patient had a normal lung function and was able to lead an independent life. Autologous and allogeneic approaches The Regenerative Medicine in Europe (REMEDiE) project surveyed all European small and mediumsized enterprises (SMEs) developing cell-based therapy in 2010.140 It identified 65 SMEs developing cell therapy, of which the majority (50) were pursuing approaches that used the patient’s own cells (autologous therapy). The remaining 15 SMEs were developing approaches where the cells used for therapy originated from another person (allogeneic therapy). 139 140 POSTnote 333, Regenerative Medicine, May 2009 Taking Stock of Regenerative Medicine, BIS/DH, 2011 POST Report March 2013 Stem Cell Research Page 52 Box 5.2 Gene therapy for X-linked SCID X-linked severe combined immune deficiency (X-linked SCID) is a rare disease that affects less than 1 in 200,000 baby boys. It is caused by a fault in the gene coding for the common cytokine receptor γ-chain, and leaves the immune system incapable of mounting an effective immune response to common infections. Boys with X-linked SCID have a very poor prognosis if the condition is untreated, usually dying from infectious disease before they reach the age of one year. The condition can be treated by bone marrow transplantation, but a suitably matched donor (usually a close relative) is only available in around one in three cases. Box 5.3 Immune rejection All of the cells in a human body display proteins (antigens) on their outer surface. These antigens are coded for by a cluster of genes found on chromosome 6 of the human genome and collectively known as the major histocompatibilty complex (MHC). The presence of these MHC antigens143 on the outer surface of cells is the body’s way of marking cells as belonging to ‘self’. Under normal circumstances, an immune system will recognise its own particular pattern of MHC antigens and will not attack cells displaying it. Cells from another (‘foreign’) source will display a different pattern of MHC antigens, and will be attacked by the immune system. The first gene therapy trials for treating this disorder were reported in 2000.141 The strategy involved using a viral vector to insert a ‘good’ copy of the ‘faulty’ gene into HS cells taken from the patient, and these cells were then used to repopulate the patient’s bone marrow. The treatment restored normal immune responses in both of the patients receiving it in the initial trial. However, this approach received a major setback when five out of 20 boys in subsequent trials in the UK and France developed leukaemia. In these patients, the act of inserting the gene into a chromosome in the HS cells had inadvertently activated a proto oncogene (a gene that has the potential to cause cancer) near the site of insertion (this is known as insertional mutagenesis). One of the children died from leukaemia; the others survived following chemotherapy and were among the majority of children receiving the treatment whose immune responses were restored. The episode led to a suspension of some types of gene therapy trial, and to the development of safer vector designs. The advent of new vectors has led to the recruitment of patients into a new trial split between hospitals in London, Paris, and the USA.142 It is these immune responses to different patterns of MHC antigens that cause the immunological rejection of cells, tissue or organs that have been transplanted from one individual to another. The chances of immune rejection can be minimised by trying to match the tissue type of the donor to that of the host. Donation between identical twins is the best way of ensuring that immune rejection does not occur, but this is not possible in most cases. Tissue typing between close family members is another common strategy for reducing the risk of immune rejection. A combination of tissue typing and the use of immune suppressing drugs is usually needed for allogeneic cell therapy. The main reason why autologous trials are further advanced than allogeneic is that the approach avoids most of the issues associated with immune rejection (see Box 5.3). It is thus usually easier to secure regulatory approval for an autologous trial than it is to get approval for an allogeneic approach. The following sections look at some of the cell therapies currently under development in the UK and elsewhere. Rather than attempt a comprehensive list of all the trials of autologous therapy being undertaken, Section 5.2 gives an overview of the different types of trials to date. Allogeneic therapies are covered in Section 5.3. 5.2 Autologous cell therapy trials Types of cells used Cells most commonly used in autologous therapy fall into one of the following three categories.144 Mesenchymal stem (MS) cells. MS cells are of interest for two main reasons. First they readily differentiate into bone and cartilage lineages, so their ability to repair such tissues is the subject of a number of early stage clinical trials. Second, MS cells also exhibit immune suppressive effects and so there are trials underway investigating whether such properties can be used to treat heart disease, immune rejection or autoimmune disorders such as multiple sclerosis. Haematopoietic stem (HS) cells. HS cells are among the best characterised stem cells (see Chapter 4) and researchers have considerable experience in using such cells in the clinic and in directing their differentiation down different lineages in the laboratory. Tissue-specific progenitor cells with a more restricted differentiation capacity responsible for normal tissue renewal and turnover, such as neurons, intestine, skin, lung and muscle. 143 141 142 Cavazzana-Calvo M et al, Science, 288 (5466), 669-672, 2000 Herzog R, Molecular Therapy, 18(11): 1891, 2010 144 In humans, the antigens coded for by the genes in the MHC are often referred to as human leukocyte antigen (HLA) Reflection paper on stem cell-based medicinal products, EMA 2011 POST Report March 2013 Stem Cell Research It has also been suggested that induced pluripotent stem (iPS) cells could be used for autologous therapy. Such an approach would combine the advantage of autologous therapy (avoidance of immune rejection) with that of allogeneic therapy (the ability to create cells of any type). However, no clinical trials of iPS cells have been undertaken to date because of concerns over the potential safety of such approaches. These include (see Section 4.4): the subtle differences in gene expression and regulation seen between hES and iPS cells concerns that iPS cells may retain an epigenetic memory of their previous state concerns over the stability of iPS cells and their potential to cause tumours. Cell therapy and blood cancers Among the most established autologous therapies are the use of HS cells for the treatment of blood cancers such as lymphoma and multiple myeloma. Here the cell therapy is not being used to treat the cancer directly; this is done using aggressive chemotherapy to kill the cancerous cells and with them, wipe out virtually all of the cells in the patient’s bone marrow. The HS cells, which are collected prior to chemotherapy and stored, are then re-introduced into the patient, where they repopulate the bone marrow and go on to produce the full range of blood cells. This approach is the treatment of choice in patients with Hodgkin or nonHodgkin lymphoma who have relapsed following conventional treatment. It allows the use of much higher doses of chemotherapy, increasing the chances of curing the disease. Auotologous HS therapy in conjunction with chemotherapy has also been shown to increase the survival time of patients with multiple myeloma. Cell therapy and cardiac function There have been numerous trials using HS cells or mesenchymal stem (MS) cells in patients with various forms of heart disease.145 The initial aim of many such trials was to investigate whether such cells could assist cardiac repair following a heart attack. Such studies have shown little evidence of physical regeneration of heart tissue. However, there is evidence from some of the studies that infusion of the heart with HS cells following a heart attack may help to limit the extent of the damage incurred and improve certain aspects of heart function, at least in the short-term. Page 53 It is now thought that these effects may be caused by HS cells stimulating endogenous repair of heart tissue rather than by direct repopulation and regeneration of heart tissue.146 However, there is considerable variation from one study to the next about the extent of such effects suggesting that there is a need to optimize treatment timing, cell type and dose, and delivery methods.147 There have also been trials to investigate the possible regenerative effects of cells derived (by biopsy) from the heart itself following a heart attack.148 In the so-called SCIPIO trial, cells cultured from atrial tissue were injected back into the patient’s heart. In a similar study (CADUCEUS) cardiospheres − spherical structures of cardiac cells − cultured from ventricular tissue were used. In both studies the treatments were well tolerated and both resulted in a reduction in the amount of scarred tissue. One of the trials showed a modest improvement in one measure of heart function. However, both trials involved a small number of treated patients (16 in SCIPIO and 17 in CADUCEUS); larger trials would be needed to show clear evidence of clinical benefit. Several UK clinical trials are currently looking at cell therapy and cardiac function. For instance, one trial is investigating whether infusion of autologous bone marrow derived progenitor cells to patients undergoing treatment for heart attack will lead to an improvement in cardiac function. Another trial is investigating whether the same procedure is effective in improving cardiac function in patients suffering from chronic heart failure. And a third trial is looking at the effects of Granulocyte-colony stimulating factor (GCSF), which stimulates the production of circulating blood progenitor cells. It will compare GCSF given on its own with GCSF given in conjunction with autologous bone marrow derived stem cells administered in two different ways. 146 147 145 Ptaszek LM et al, Lancet, 379, 933–42, 2012 148 Loffredo F et al, Cell Stem Cell 2011, 8(4), 389-398, 2011 Trounson A et al, BMC Medicine, 9:52, 2011 Ptaszek LM et al, Lancet, 379, 933–42, 2012 POST Report March 2013 Stem Cell Research Page 54 Cell therapy and stroke Cell therapy and immune disorders There is a large body of evidence from pre-clinical studies that stem cell therapy can improve outcomes following ischaemic149 stroke in animal models for this condition. Such studies have used MS cells, HS cells or various other cell populations isolated from bone marrow. A number of possible mechanisms have been proposed for such effects and these include:150 cell replacement, where the transplanted cells migrate to the affected area of the brain and differentiate into neural/glial cells protective effects, where the transplanted cells produce factors that support the survival of existing neurones and/or support the production of new neurons and connections angiogenesis, where the transplanted cells promote the formation of new blood vessels protective effects where the transplanted cells modulate immune responses and help to limit the resulting damage. Autoimmune disorders such as multiple sclerosis, scleroderma and lupus are the result of immune (T) cells attacking the body’s own tissue. Autologous HS cells have been used in early stage clinical trials for each of these diseases. The strategy is to use aggressive immune suppression to deplete the population of rogue T cells that are causing the problem followed by transplantation of HS cells to re-establish the patient’s immune system. The results from early phase trials show evidence of clinical benefit for each of these diseases. For instance, in trials with patients with multiple sclerosis, the therapy slowed progression of the disease and reduced inflammation.152 Larger-scale trials are needed to show whether such benefits translate into longer-term clinical benefits or disease remission. Such trials would also reveal whether the benefits outweigh the risks inherent in therapies that involve aggressive immune suppression. A number of small scale clinical trials have taken place using autologous MS or bone marrow cells administered to stroke patients. While the treatments were well tolerated in most cases, there is little clear-cut evidence of clinical benefits from the trials conducted to date.151 The studies varied in the choice of cells used, in the route of administration for cell transplantation and in the timing of the cell transplantation. It is not clear what the optimum approach is for any of these factors. A wide range of other sources of autologous cells have been used in small scale clinical trials to treat various conditions. Examples include: Adipose stem cells have been have been used in trials to investigate soft tissue repair. They can be used along with scaffolds for procedures such as breast reconstruction, and also form the basis of commercial treatments for burns. Endothelial cells are thought to stimulate angiogenesis (the formation of new blood vessels) and have been used in trials for conditions such as stroke. Results are variable, and the exact mode of action is uncertain. Limbal stem cells found in the eye have been shown to be a safe and effective way of restoring vision due to loss or damage of corneal epithelial cells. 149 150 151 Ischaemic refers to a condition caused by a decrease in the blood supply to a tissue or organ, so an ischaemic stroke results in a restriction of the blood supply to the brain Sahota P and Savitz S, Neurotherapeutic, 8(3), 434–451, 2011 Sahota P and Savitz S, Neurotherapeutic, 8(3), 434–451, 2011 Other autologous cell therapy approaches 152 Capello E et al, Neurol Sci, 30(Suppl 2), S175-177, 2009 POST Report March 2013 Stem Cell Research Box 5.4 Immune privilege It has been known for many years that some tissues of the body tolerate tissue grafts better than others. In particular, the eye, brain, spinal column, pregnant uterus and testes are known to tolerate tissue grafts that would normally be rejected at other sites within the body. It was widely assumed that this so-called immune privilege was the result of the exclusion of immunologically active cells from these tissues. For instance, it was thought that physical barriers such as the blood-brain, blood-retina, blood-placenta and blood-testis barriers prevented immune cells such as leukocytes from entering immune privileged tissue. However, more recent research suggests that immune privilege is more likely to be the result of a number of highly active, localised mechanisms that act to suppress normal immune responses in such tissue.153 This has implications for the way in which diseases that affect immune privileged tissues such as the eye are treated. Better understanding of the mechanisms by which immune privileged tissue is able to suppress normal immune responses may help researchers develop allogeneic therapies that are more widely applicable within the body. 5.3 Allogeneic cell therapy trials Allogeneic therapy is less well advanced than autologous therapy. This is mainly because of concerns about immune rejection (see Box 5.3). These concerns mean that many of the allogeneic trials to date have targeting diseases of immune privileged sites of the human body such as the eye, brain and spinal column (see Box 5.4). Such approaches may allow researchers to transplant allogeneic cells without having to use aggressive immune suppression strategies. Types of cells used Allogeneic approaches have included the use of cells such as keratinocytes and fibroblasts derived from new born babies. Such cells can be cultured in the laboratory and frozen, then thawed and used when needed in applications such as wound healing. The use of cultured cells of this type appears to avoid the extreme immune rejection responses often seen with allogeneic therapy.154 An example of their use is in the healing of venous leg ulcers, where they have been shown to be safely tolerated and clinically effective (see Box 5.5). 153 154 Benhar I et al, Front. Immun, 3, 296, 2012 www.frontiersin.org/Immunological_Tolerance/10.3389/fimmu.2012. 00296/full Dominguez-Castillo R et al, Immunology, 125, 370–376, 2008 Page 55 Box 5.5 Allogeneic cell therapy for venous leg ulcers Venous leg ulcers are persistent ulcers of the legs that are caused by high blood pressure that damages small blood vessels to the point where ulceration occurs. They affect around 1 in 500 people in the UK, although this rate rises sharply with age with an estimated 1 in 50 people over the age of 80 developing them. People who are obese, unable to exercise or who have varicose veins are also at higher risk of developing venous leg ulcers. They can be treated by cleaning and dressing the wound, and use of compression bandages to restrict blood flow. However, they are slow to heal and prone to infection by bacteria. Various allogeneic cell therapy approaches have been investigated as possible treatments for venous leg ulcers. Some of these have involved use of cultured cells alone, and others have used cells in combination with a matrix of some description. In general, trials of these approaches have been too small to demonstrate clinical effectiveness. However a recent large, properly randomised, study looked at the use of growth-arrested neonatal keratinocytes and fibroblasts in a spray-applied matrix for treating venous leg ulcers. It provided clear evidence of significantly greater reduction in wound area associated with the cell-based treatment compared to the control (placebo) treatment.155 It also provided evidence for optimum dose and timing of dose. There have also been a number of trials looking at transplanted pancreatic beta cells for treatment of diabetes. These have shown promise, with around 70% of patients becoming insulin independent.156 However, insulin independence is only maintained for a relatively short time, with all of the treated patients eventually reverting back to insulin replacement therapy. Furthermore, the treatments are limited by the availability of suitable donors (each patient needs multiple donors) and it is unclear whether the clinical benefits are outweighed by the need for immune-suppression. Allogeneic therapy using HS cells has also been used to treat leukaemia (and acute myeloid leukaemia) using tissue typing to match donors and hosts. However, much of the recent interest in allogeneic cell therapy has been in trials using two main types of cells: neural stem cells derived from fetal tissue differentiated cells derived from hES cell lines. 155 156 Kirsner R et al, The Lancet, 2012 published online at http://dx.doi.org/10.1016/S0140-6736(12)60644-8 Matsumoto S, J Diabetes, 2(1), 16-22, 2010 POST Report March 2013 Stem Cell Research Page 56 Fetal neural stem cells Disorders of the Central Nervous System Current trials of fetal-derived stem cells are summarised in Table 5.1. An American company, Stem Cells Inc, is currently conducting trials of a fetal-derived neural stem (NS) cell line in treatments of three diseases: Batten disease, a rare neurodegenerative disorder affecting children Pelizaeus–Merzbacher disease, a rare disorder of the central nervous system affecting coordination, motor abilities, and intellectual function chronic spinal cord injury. Another American company, Neuralstem Inc is testing fetal-derived spinal cord neural stem (NS) cells in clinical trials for the treatment of amyotrophic lateral sclerosis, a form of motor neurone disease (see Box 4.5 in Chapter 4). All of these trials are in early (phase I) stage, where the object is primarily to establish that the procedures are safe and well tolerated by the patients. Stroke A British company ReNeuron is conducting early stage (phase I) clinical trials on fetal-derived NS cells. These cells have been modified in the laboratory to immortalise them. This means that they are capable of propagating indefinitely, but this is controlled by a promoter that can be switched on and off for manufacturing purposes. The cells are being implanted into the brains of disabled stroke patients at three different doses to check that the treatment is safe. Early results from the trial are promising, with all five of the first patients treated showing reductions in neurological impairment and spasticity. The Company has submitted an application to the UK regulatory authority to start a multi-site Phase II clinical trial in mid 2013 to examine the efficacy of the cells in treating disabled stroke patients. The proposed study is expected to take up to 18 months. TABLE 5.1 TRIALS OF FETAL STEM CELLS157 Company Stem Cells Inc Neuralstem Inc ReNeuron Disease Batten disease Pelizaeus‐ Merzbacher Disease Chronic spinal cord injury Amyotrophic lateral sclerosis Stroke Cells Phase Fetal‐derived NS cells Fetal‐derived NS cells I I Fetal‐derived NS cells Fetal‐derived spinal cord NS cells Immortalised fetal‐derived NS cells I I I TABLE 5.2 TRIALS OF HES-DERIVED CELLS Company Disease ACT Stargardts macular dystrophy Age related macular degeneration Spinal muscular atrophy Geron ACT CSC London project/ Pfizer Spinal cord injury Age related macular degeneration Cells Oligo‐ dendrocyte progenitor cells Retinal pigment epithelium Retinal pigment epithelium Motor neurone progenitor cells Retinal pigment epithelium 158 Phase I dis‐ continued I I I submitted I submitted hES-derived cell therapies Spinal cord injury A number of trials involving hES-derived cell lines are underway or poised to start (see Table 5.2). The first such trial was Geron’s trial of cells derived from hES cells to treat patients with severe spinal cord injury. This type of injury is caused by trauma to the spinal cord and results in a complete loss of sensory or motor function below the site of the injury. The trial was open to patients who met specific criteria, namely a traumatic spinal cord injury to the middle (thoracic) region of the spine between the third and eleventh vertebrae. 157 158 Adapted from Trounson A et al, BMC Medicine, 9:52, 2011 Adapted from Trounson A et al, BMC Medicine, 9:52, 2011 POST Report March 2013 Stem Cell Research The trial recruited five such patients. Each received a single injection of cells derived from hES cells into the spinal cord at the site of injury one to two weeks after the injury occurred. The cells used were oligodendrocyte progenitor cells. These are naturally occurring cells in the nervous system that are known to be lost following traumatic spinal cord injury. They produce the myelin sheath that protects nerves in the spinal cord. They also produce protein factors that are responsible for the growth and survival of developing nerve cells and the maintenance of mature nerve cells. However, the trial was discontinued in November 2011. Geron announced that in view of the current economic climate, it was going to focus on experimental cancer therapies, which are further along in development. The patients already recruited and treated in the trial will continue to be monitored in accordance with the clinical trial protocol. But the trial itself is now closed and will not be recruiting any more patients. Diseases of the eye The American company Advanced Cell Technology (ACT) has derived retinal pigment epithelium from hES cells and is undertaking phase I clinical trials to assess its suitability for treatment of two diseases of the eye: Stargardts macular dystrophy (SMD), a genetic eye disorder that causes progressive loss of vision. It typically affects people in late childhood and early adulthood. Age-related macular degeneration (AMD, a leading cause of vision loss in adults over 50, see Box 5.6). Each trial will recruit 12 patients who will receive the retinal epithelial cells as a transplant under the retina. The first three patients receive the lowest dose, with the dosage increasing with each subsequent cohort of three patients. Initial results of the first two patients – one with AMD and one with SMD – were published in February 2012.159 159 Schwatrz S et al, The Lancet, 379 (9817), 713-720, 2012 Page 57 Box 5.6 AMD and The London Project to Cure Blindness The London Project to Cure Blindness is a on-going project led by Professor Pete Coffey at the University College, London (UCL) Institute of Ophthalmology to develop a stem cell-based therapy for AMD. It aims to prevent blindness, restore sight and improve the quality of life for people with AMD. It was set up in 2007 and was initially funded through philanthropic donations and by the charitable sector, including the UK charity the Macular Disease Society and the US-based Lincy Foundation. In April 2009, UCL announced that the pharmaceutical company Pfizer will provide funding to enable research into the development of stem cell-based therapies for AMD as well as other retinal diseases. Proof-of-concept trials were conducted at Moorfields Eye Hospital in 2007 and 2008 using retinal pigment epithelium cells taken from non-diseased parts of the patient’s eye. Such trials showed that transplanting ‘healthy’ cells under the damaged area of the eye (the macular) can prevent blindness and restore sight. However, the complexity of the surgery and its associated complications mean that this is not a viable method for treating the estimated 550,000 UK cases of AMD in 2012. This figure is projected to increase to 679,000 cases by 2020 as the proportion of older people in the UK population increases.160 Having demonstrated that retinal pigment epithelium could restore vision in patients suffering from AMD, the London Project researchers started looking for alternative sources of these cells. They found that they could derive healthy, fully functional retinal pigment epithelial cells from hES cells. Furthermore, they have developed methods for growing sheets of these cells, and relatively simple surgical techniques for transplanting them into the eye. This may make it possible to conduct the required surgery in around an hour on a day-care basis which would represent a much more practical approach to treating the projected increase in cases of AMD in the UK. The researchers have successfully demonstrated that the hESderived cells can restore visual function in an animal model of AMD and are awaiting regulatory approval to start recruiting patients in a phase I clinical trial. Checks conducted four months after the treatments showed that both patients tolerated the treatment well. There was no evidence of runaway cell growth or tumour formation (a particular concern with cells derived from pluripotent ES cells). Nor were there any signs of immune rejection or abnormal signalling. There was clear evidence that the retinal pigment epithelial had successfully been transplanted in the patient with SMD and was growing in a normal, controlled fashion. Evidence of a successful transplant was not seen in the patient with AMD. However, both patients showed some signs of improved vision. 160 Owen C et al, Br J Ophthalmol, 96 (5), 752-756, 2012 Page 58 The Advanced Cell Technology trial has now obtained clearance from the MHRA to begin treating patients as part of a Phase I/II clinical trial for SMD in the UK. Patient enrolment has begun and the first patient was treated at Moorfields Eye Hospital in London in January 2012. The London Project to Cure Blindness (see Box 5.6), in conjunction with Pfizer has also derived retinal pigment epithelium from hES cells. It has conducted extensive pre-clinical studies and is awaiting regulatory approval to start phase I clinical trials to treat patients with AMD. If such approval is forthcoming, the trial will also take place at Moorfields Eye Hospital in London. Neurodegenerative disease There is also considerable interest in using cells derived from hES cells for treating a range of neurodegenerative diseases. To date no such approaches have received regulatory approval for clinical trials to start. An American company, California Stem Cells (CSC, see Table 5.2) has derived motor neurone progenitor cells from hES cells and is awaiting regulatory approval for a trial to treat spinal muscular atrophy (SMA). SMA is the leading genetic cause of death in infants. It is a disorder caused by a deficiency in a protein which is essential to the proper functioning of the motor neurons in the spinal cord. It causes deterioration of the muscles that control walking, swallowing and breathing. There are currently no treatments for the disease. Looking further ahead, the EU’s seventh Framework Programme is funding the NeuroStemcell programme to develop treatments for Huntington’s disease and Parkinson’s disease (see Box 5.7). Both of these diseases are caused by degeneration of specific types of neurons. The approach involves deriving safe, well-characterised and pure populations of the specific neuronal types and investigating their performance in animal models of these diseases. Researchers from three UK institutions are participating in the project (see Box 5.7). POST Report March 2013 Stem Cell Research Box 5.7 The NeuroStemcell programme The NeuroStemcell programme is an €11.9 million research project funded for four years under the EU’s Seventh Framework Programme. It consists of a consortium of 13 research institutions and three SMEs from six EU Member States with one US collaborator. Its aim is to develop better treatments for two diseases: Huntington’s disease (HD) and Parkinson’s disease (PD). Both diseases are associated with degeneration of specific types of neurons: striatal neurons in HD and dopamine-producing neurons in PD. The project aims to deliver safe and validated cells of these types that can be used therapeutically (via transplantation into patients) and in research for drug discovery purposes. Three UK institutions are taking part in the consortium: The University of Cardiff’s Brain Repair Group which has an international reputation in assessing motor and cognitive function associated with cell transplantation in animal models of HD and PD. This group will provide simple standardised tests of motor function for use by all groups in the consortium for screening stem cell grafts. It will also develop more sophisticated tests of motor and cognitive function to assess the efficacy of promising stem cell transplants in animal models of HD and PD. The University of Cambridge, which will be involved in producing the stem cells and in translational research towards their use in clinical studies. A group at the Wellcome Trust Centre for Stem Cell Research will focus on the production and stable expansion of neural stem cells from ES cells and fetal tissue sources. It will provide the consortium with neural stem cells derived from animals (rats) and humans. A second, clinical, group will focus on the translation of stem cell therapies to patients with PD. This will include defining subtypes of PD so that novel therapies can be targeted to appropriate groups of patients. It will also develop new markers of disease to assess therapeutic effects of any stem cell therapies. Imperial College, London’s Clinical Science Centre which will develop defined population of specific types of neurons and progenitor cells. This will involve directing the differentiation of ES cells to produce defined neural cell populations and studying their survival, differentiation and integration following transplantation. POST Report March 2013 Stem Cell Research 6 Page 59 General Remarks Overview Stem cell research is regulated by many different agencies, and there is some overlap between them. Recent years have seen progress in reducing this overlap, but there is scope for further streamlining of both regulation and legislation. The UK is one of the world leaders in stem cell research, but the challenge is translating this research from the lab into the clinic. The Government is supporting this translation through initiatives such as the Cell Therapy Catapult and the Biomedical Catalyst Fund. There are many potential benefits arising from stem cell research, including cell-based therapy. The next few years should see firm evidence available from clinical trials to better assess the potential of cell-based therapy. 6.1 Background This section of the report looks at the issues raised by the advances in stem cell research made over the 10 years since the House of Lords Stem Cell Research Committee published its report. In its report, the committee grouped its conclusions and recommendations under four main headings: Stem cell research. This was primarily concerned with the availability of alternatives to hES cells, and the continued necessity for research on hES cells. Status of the early embryo. Among the issues here were whether the potential benefits of hES cell research outweigh the possible moral objections, and whether embryos should be created specifically for research purposes. Cell nuclear replacement (CNR) and cloning. At the time the committee reported, there was debate over whether embryos created using CNR should be regulated in the same way as those created by fertilisation. And there was concern that CNR might be used for human cloning in countries that did not explicitly prohibit it.161 Future legislation and regulation. Here the committee focussed on mechanisms to review progress in stem cell research, on the need to ensure that the HFEA was adequately resourced, on the creation and maintenance of a stem cell bank and on the consents obtained to those individuals donating embryos from which cell lines are derived. Many of the issues considered by the Committee are still of interest today. For instance, debate about the continued necessity for hES cell research and alternatives sources of stem cells intensified following the development of iPS cells. Similarly, while the debate over the moral status of the embryo has not moved on much since the Committee’s report, discussion on the potential risks and benefits of embryo research continues. For some of the other issues considered by the Committee, the debate has shifted its focus in the last ten years. Nuclear transfer is one such example. When the Committee published its report, the main concern was the possible use of such techniques for human cloning. Now, however, the debate is largely about whether related techniques are safe enough to be used in the clinic to prevent mitochondrial disease (Box 2.2). A similar shift has occurred on the issue of the regulation of health research in general, and of embryo research in particular. In 2002, the Committee was concerned to ensure that the government keep HFEA’s funding “under review and ensure that it is commensurate with its increased responsibilities”.162 In June 2012 the Government consulted on proposals (since dropped) to abolish HFEA163 and is now considering options for merging it with HTA.164 This section of the report will look at these issues under the following headings. Regulatory issues such as the establishment of the HRA, the future of the HTA and HFEA, possible reform of the Human Tissue Act 2004, NHS research permissions, reform of the Clinical Trials Directive and intellectual property issues. Commercialisation of stem cell research. Potential benefits and risks of cell therapy. Where stem cell research might go in the next few years. 162 163 161 Human cloning was prohibited in the UK by the Human Reproductive Cloning Act 2001 164 Report from the Select Committee on Stem cell Research, House of Lords, HL 83(i), February 2002 www.dh.gov.uk/health/files/2012/06/Consultation-on-proposals-totransfer-functions-from-the-Human-Fertilisation-and-EmbryologyAuthority-and-the-Human-Tissue-A.pdf www.wp.dh.gov.uk/publications/files/2013/01/Terms-ofreference.pdf POST Report March 2013 Stem Cell Research Page 60 6.2 Regulatory Issues Background The current regulatory system for stem cell research was described in chapter 3. From a stem cell researcher’s point of view the current system is complex, and involves dealing with multiple agencies. For example, a researcher may need to seek permissions from the following bodies: HFEA (for research on human embryos) HTA (for research on human tissue) Home Office (for research on animals) HSE (for research involving genetic modification) Research Ethics Committee (for research involving human subjects) Individual primary care trusts (until 1 April 2013, for NHS research permissions) MHRA (for clinical trials) EMA (for clinical trials involving stem cells, tissue engineered products or other advanced therapy medicinal products). Recent years have seen several initiatives to streamline the regulation of health research in general. These include the DH review of armslength bodies, the Academy of Medical Sciences’ (AMS) review of the regulation and governance of health research and the establishment of the Health Research Authority as a single regulatory body for health research. These are discussed in the following sections. DH Review of arms-length bodies The DH’s review of arms-length bodies published in July 2010, proposed setting up a single regulator for health research.165 It saw such an approach as having a number of advantages. For instance, it would provide a single point of contact for researchers, and have the potential to increase efficiency, shorten the time taken to consider applications and lead to a more proportionate approach to regulation of research. Among the arms-length bodies considered in the DH review were two of the key organisations involved in regulating stem cell research: HFEA and HTA. The review proposed abolition of both HFEA and HTA with their functions being split between the new health research regulator and CQC. 165 ‘Liberating the NHS: report of the arm’s-length bodies review, DH, 2010 Proposals for a health research agency This approach was endorsed by the AMS review which recommended setting up a health research agency. The AMS review envisaged that such an agency would work as a “one-stop shop” for the regulation of health research and would have the following core functions. Be responsible for all aspects of the ethical review of health research. AMS recommended moving NRES into the new agency. Be the appointing authority for phase I RECs for clinical trials and advise on ethical issues relating to the processing of health and social care information. Be responsible for some other research regulation functions. AMS recommended that the new agency would be responsible for advising ministers on the administration of radioactive medicinal products to patients. Work closely with MHRA to streamline the regulation of clinical trials by providing clear guidance on the Clinical Trials Directive and ensuring that good clinical practice inspections are proportionate. Be responsible for streamlining the process for obtaining NHS R&D permissions and establishing consistent practices and timelines. AMS also recommended transferring the researchrelated regulatory functions of HTA to the new agency. It noted the Government’s intention to reform the HFEA by the end of the current parliament. It recommended that, if this remained the Government’s intention, the research-related regulatory functions of HFEA should also be transferred to the new agency. Establishment of HRA In December 2011, the Government established HRA as a Special Health Authority (SHA). Its purpose is to protect and promote the interests of patients and the public in health research. However, HRA will also work to combine and streamline the current approval system and promote a consistent and proportionate approach to regulation. An explicit goal is to reduce the regulatory burden on research-active businesses, universities and the NHS.166 166 www.dh.gov.uk/health/2011/12/creation-hra/ POST Report March 2013 Stem Cell Research The National Research Ethics Service has been transferred to the HRA and the authority has also taken on the functions of the National Patient Safety Agency. HRA is providing the Integrated Research Approval Service (IRAS) and working towards establishing a unified approval process. The draft Care and Support Bill will establish the HRA as a statutory non-departmental public body. As discussed in the next section it envisages that further regulatory responsibilities will be transferred to the HRA. The future of HTA and HFEA In June 2012, DH published a consultation on options to transfer the research functions regulated by HFEA and HTA to other bodies.167 It invited opinions on three main options: Option one (the Government’s preferred option) − all HTA and HFEA regulatory functions to be transferred to the Care and Quality Commission (CQC) except those HFEA functions relating to research which will be transferred to HRA. HFEA and HTA will be abolished. Option two – all functions to be transferred to CQC/HRA as above, with the exception of a limited set of functions that will be transferred to other organisations. HFEA and HTA will be abolished. Option three – HFEA and HTA will retain their current functions but deliver further efficiency savings. Further details of the three options are summarised in Table 6.1. The consultation closed at the end of September 2012, and the Government published the responses in January 2013.168 The impact assessment that accompanied the consultation identified a number of potential benefits and risks.169 The main benefits were seen as: reduced running costs estimated at £370,000380,000 a year arising from abolition of HFEA and HTA reduced administration costs, although these were not quantified savings arising from a reduction in regulatory overlap and the reduced regulatory burden on those regulated (again, not quantified). 167 168 169 http://data.parliament.uk/DepositedPapers/Files/DEP20121078/Consultation.pdf www.wp.dh.gov.uk/publications/files/2013/01/Stakeholderresponses.pdf www.ialibrary.bis.gov.uk/uploaded/DH%206044%20%20Consultation%20IA-Transfer-Functions-from-the-HFEA-andHTA.pdf Page 61 As far as potential risks were concerned, the impact assessment suggested that these were: fragmentation and loss of expertise and knowledge arising from dispersing the functions of a single regulator between multiple regulators loss of cumulative expertise arising from abolition of HFEA and HTA the standard of regulation could be adversely affected during the transition period loss of reputation and confidence in the regulatory system resulting from the abolition of two tried and trusted regulators such as HFEA and HTA. Consultation responses The Government received and published over one hundred responses. Overall, 60% of respondents agreed that HFEA and HTA should retain their functions; 75% disagreed with the proposal to transfer HFEA and HTA functions to CQC and HRA. Key themes identified by the responses were:170 Around half of respondents favoured retention of HFEA and HTA because of concerns over whether CQC has the expertise or capacity to take on regulation of these fields. Some referred to reports by the National Audit Office and the Public Accounts Committee (see Box 6.1) which concluded that extending CQC’s remit might affect its capacity to deliver its core functions. Many respondents cited concerns over the potential loss of expertise built up by HFEA and HTA over the years as a reason for retaining these bodies. Many also suggested that HFEA and HTA were well known, respected and trusted brand names. Around half of respondents commented on the impact assessment. Many of these felt that the transition costs had been underestimated. Overall, the message that emerged was that the potential benefits of options one and two were somewhat modest and outweighed by the risks associated with the abolition of the two regulators. Many respondents supported further reduction in regulatory overlap and more streamlining of the regulatory landscape. Some referred to recent cost efficiencies and closer working practices made by HFEA and HTA (see Box 6.2) citing them as evidence that abolition was unnecessary. Around a quarter of respondents saw a need for a review of the way the bodies undertake their functions. 170 www.dh.gov.uk/health/files/2013/01/Government-response-toconsultation1.pdf POST Report March 2013 Stem Cell Research Page 62 TABLE 6.1 SUMMARY OF PROPOSALS TO TRANSFER HFEA AND HTA FUNCTIONS Agency HFEA HTA Function Licensing research involving human embryos/admixed embryos Inspection and regulation of licensed embryo research centres Issuing guidance on embryo research (e.g. on obtaining consent from people providing gametes or embryos for research) Functions relating to exemptions (which are specific to research projects) from the normal requirements Licensing treatment services Approving embryo tests (e.g. PGD) Procuring/distributing sperm Licensing the storage of human gametes, embryos/admixed embryos Powers of inspection Maintaining a register of information relating to treatments Authorising disclosure of information for medical/research purposes Provision of information to donors, donor conceived people and donor siblings Setting remuneration levels for gamete and embryo donors Licensing organisations that store/use human tissue for research Licensing anatomical and post‐mortem examinations Licensing the removal of tissue from a dead body for use for a scheduled purpose other than transplantation or research Licensing the storage of anatomical specimens Licensing the storage of a dead body for use for a scheduled purpose Licensing the public display of human bodies or tissue Assessing donations from living persons for transplantation Consent to DNA analysis of tissue from a living person for the benefit of another person Powers of inspection Licensing the storage/use of tissues and cells intended for human application Licensing activities in accordance with regulations relating to the procurement, testing, processing, distribution, import or export of tissues and cells intended for human application Authorisation of persons to distribute, import or export tissues or cells from where procurement takes place for immediate transplantation to humans Authority to disclose identifying information about a donor Option 1 Option 2 Option 3 HRA HRA HFEA CQC CQC CQC CQC CQC CQC CQC CQC HFEA HFEA HFEA HFEA CQC CQC CQC CQC HSCIC HSCIS HFEA HFEA HFEA CQC DH HFEA CQC CQC CQC CQC DH HRA CQC CQC HFEA HTA HTA HTA CQC CQC CQC CQC HTA HTA CQC CQC CQC ACE NHSBT CQC HTA HTA HTA CQC CQC CQC MHRA or CQC MHRA or CQC HTA HTA CQC CQC HTA CQC CQC HTA HRA HRA HRA CQC HRA HRA HRA HFEA HFEA HFEA HTA Key HFEA Human Fertilisation and Embryology Authority HTA Human Tissue Authority HRA Health Research Authority CQC Care and Quality Commission HSCIC Health and Social Care Information Centre DH Department of Health MHRA Medicines and Healthcare products Regulatory Agency ACE Arts Council England NHSBT national Health Service Blood and Transplant Source: Compiled from www.dh.gov.uk/health/files/2012/06/Consultation-on-proposals-to-transfer-functions-from-the-HumanFertilisation-and-Embryology-Authority-and-the-Human-Tissue-A.pdf POST Report March 2013 Stem Cell Research Box 6.1 Capacity of CQC to take on new functions A potential problem flagged up by the impact assessment for options one and two was the risk that current HFEA/HTA functions would not be delivered as effectively during the transition period as organisations adapted to the changes. It also suggested that increasing the regulatory functions of CQC might “overstretch” the organisation, and adversely affect delivery of its current functions.171 This was identified as a risk both under options one and two, but was greatest under option one because this option involved more functions being transferred to CQC. Others also questioned whether CQC has the capacity to take on new functions. For instance, a National Audit Office report in 2011 noted that CQC would start registering thousands of primacy care services in July 2012. It concluded that further extending CQC’s role could “distract it from its core work of regulating health and adult social care” .172 Moreover, an inquiry into CQC by the Public Accounts Committee in 2012 concluded that CQC “should not take on the functions of” HFEA at this time.173 It went on to say that CQC “does not have the capacity to take on oversight of such a complex area, and the change would undermine its ability to focus on the improvements it needs to make in relation to its existing regulatory functions”. Overall, the responses showed that there is widespread support for HFEA and HTA throughout the research sector, with the majority of respondents wishing to see these bodies retained, albeit for a range of different reasons. That said, many respondents expressed a wish to see further streamlining of regulation in this area. For instance, some respondents identified the full integration of HFEA research approvals into the IRAS system as a priority. Others called for a review of human tissue legislation, for instance to make RECs responsible for regulating the storage of tissue taken from the living for research purposes rather than requiring an HTA licence. There was also strong support among respondents for the HRA, particularly with respect to it becoming the single point of contact for all research permissions and approvals. Finally, respondents also identified scope for streamlining inspections. For instance AMS noted that HTA and HFEA are working to move towards joint inspections for research centres that are licensed by both organisations because they use human embryos to derive embryonic stem cells for therapeutic purposes. 171 172 173 www.ialibrary.bis.gov.uk/uploaded/DH%206044%20%20Consultation%20IA-Transfer-Functions-from-the-HFEA-and-HTA.pdf The Care Quality Commission: Regulating the quality and safety of health and adult social care, NAO, December 2011 www.publications.parliament.uk/pa/cm201012/cmselect/ cmpubacc/1779/177904.htm Page 63 Box 6.2 Efficiency savings already made by HFEA and HTA HFEA and HTA have both made cost efficiencies since the arms length body review was announced in July 2010. For instance, HFEA has reduced its total expenditure by 25% (from £8m to £6m), and the total number of staff it employs (from 86 in 2010/11 to 70 staff now). At the same time it has reduced the fees it charges for licensed centres to provide treatment cycles and co-located with CQC resulting in an annual saving of around £400,000 in office accommodation costs. Over the same period, HTA has made 27% savings and reduced its fees across sectors by an average of around 17%. There is also scope for achieving efficiency savings in terms of reduced regulatory overlap under the current system (option three) and progress has been made towards this. For instance: HFEA, HTA and CQC have convened a joint working group with the aim of avoiding duplication and streamlining regulation. The working group is developing a system whereby centres licensed for particular activities by HFEA are exempt from requiring a CQC licence. CQC has agreed two joint working agreements (memoranda of understanding), one with HFEA and one with HTA. Each ensures that the regulators will share information about services that fall under the remit of all three bodies, respect each organisation’s independence, and continue to explore ways to develop more effective and efficient ways to work together to promote quality and safety. HTA has undertaken joint inspection visits with MHRA on 12 establishments licensed by both for development of medicinal products. HFEA and HTA are planning to hold joint inspections of ten research centres that do research on stem cells or that store ovarian/testicular tissue. Government response The government Response stated that HFEA and HTA will remain as separate statutory bodies, at least for the time being.174 It intends to introduce further efficiencies in the way in which HFEA and HTA undertake their functions and operations and has announced a review to inform this process. The review will report by April 2013 and is being conducted by the Chief Executive of the Health Protection Agency. The terms of reference for the review include examining the scope:175 to streamline the way in which the two bodies undertake their regulatory and statutory functions, including through joint working, sharing resources and information and working more closely with other health sector regulators to reduce and rationalise the burden of inspection, information collection and process of research approvals that falls on the regulated sector, without compromising the safeguards in the respective Acts for shared Authority membership and leadership, and of a merger of the two bodies functions and operations. 174 175 www.dh.gov.uk/health/files/2013/01/Government-response-toconsultation1.pdf https://www.wp.dh.gov.uk/publications/files/2013/01/Terms-ofreference.pdf POST Report March 2013 Stem Cell Research Page 64 The Government response addresses many of the issues raised by respondents to the consultation. However, it falls short of reviewing aspects of the legislation itself. For instance a number of respondents called for a review of various aspects of the Human Tissue Act (2004) to further reduce the burden of regulation. The new review also reawakens the possibility of a merger between HFEA and HTA. This was discussed in some detail in 2007 during pre-legislative scrutiny of the draft Human Tissue and Embryos Bill. The draft Bill contained measures to set up a single competent authority for tissue and embryos. This would have involved replacing HFEA and HTA with a new single body called the Regulatory Authority for Tissue and Embryos (RATE). The Joint Scrutiny Committee that conducted the prelegislative scrutiny in 2007 heard evidence on the proposed risks and benefits of such a merger that was strikingly similar to that submitted to the 2012 consultation. 176 In 2007, the main potential benefits of a merger were avoidance of duplication, increased efficiency, exploitation of synergies between HFEA and HTA and cost savings (at that time estimated as £700,000 a year). Potential risks were seen as the loss of expertise, loss of trust in the system, loss of two highly visible brands, concerns about whether the new regulator would be able to handle its broader remit and scepticism about whether the potential benefits would be delivered in practice. Having considered the evidence the Joint Scrutiny Committee noted that it “found the evidence against establishing RATE overwhelming” and recommended the Government to abandon the proposed merger. The Government decided to accept this recommendation and the Bill was subsequently amended accordingly.177 Future regulation of stem cell research In addition to the proposed changes to the regulation of human tissue and embryos, recent years have also seen regulatory developments in two other areas relevant to stem cell researchers. These are: a review of the Clinical Trials Directive streamlining and co-ordination of the system for obtaining the various permissions needed to conduct clinical trials in the NHS. Review of the Clinical Trials Directive Clinical trials are regulated under the Clinical Trials Directive, introduced in 2001. The Directive was intended to protect patient safety, but it is widely recognised that this has been achieved at the expense of increasing the administrative burden and cost of conducting clinical trials within the EU. The number of applications to conduct trials in the EU fell by 25% between 2007 and 2011 (from more than 5,000 to 3,800).178 Between 2000 and 2006, the UK’s share of clinical trials fell from 6% to just over 2% globally.179 Among the main problems associated with the Directive are:180 Inconsistent implementation across EU member states. This increases the complexity of conducting multinational trials, and thus also the cost and time taken to gain approvals. It can also leads to a divergence in the outcome of assessments between member states. The broad scope of the Directive. As implemented in the UK, studies involving minor changes to authorised clinical procedures are classified as clinical trials. For instance, a study using a drug in accordance with its marketing authorisation but with the addition of an imaging step to investigate the drug’s effect on a particular part of the body would need full clinical trials approval. A lack of proportionality in the requirements. For instance a trial involving the first use of a product in humans would be subject to the same requirements as a potentially ‘lower risk’ one involving a new use of a product that was widely available without prescription. Duplication in the requirements for safety reporting. For instance adverse reactions must be reported to the relevant ethics committees in all of the participating member states. 178 176 177 Joint committee on the Human Tissue and Embryos (Draft) Bill - First Report, July 2007 Government Response to the Report from the Joint Committee on the Human Tissue and Embryos (Draft) Bill, Cm 7209, October 2007 179 180 http://ec.europa.eu/health/files/clinicaltrials/2012_07/ proposal/2012_07_proposal_en.pdf Kinapse (2008). Commercial clinical research in the UK: report for the Ministerial Industry Strategy Group Clinical Research Working Group. A new pathway for the regulation and governance of health research, AMS, 2011 POST Report March 2013 Stem Cell Research In July 2012, the Commission adopted a proposal for a clinical trials regulation181 to replace the current Directive. The proposed regulation has yet to pass through the European Parliament and Council, and is not expected to be in place before 2016. Among its main proposals are: a streamlined authorisation procedure which will allow for a rapid assessment by all Member States and which will deliver a single outcome simplified reporting procedures which will spare researchers having to submit the same information in different formats to multiple bodies in different member states more transparency on the progress of a trial and on its results the possibility for the Commission to make sure the rules are being properly supervised and enforced in different countries. Conducting clinical trials in the NHS Researchers wising to conduct clinical trials in the NHS need to obtain a wide range of approvals from various bodies before they can start recruiting patients. These were outlined in Chapter 3 and include ethical approval, approval(s) from MHRA and any other appropriate regulator, as well as NHS R&D permissions from all of the health trusts participating in the trial. They also need to obtain funding for the trial, draw up contracts for research and NHS staff, and report details of the progress of the trial (including any adverse effects) to the relevant authorities. Recent years have seen a number of initiatives to reduce the administrative burden of conducting clinical research in the NHS. For instance NRES, now established within HRA, provides a single, UK-wide ethical opinion on proposed research IRAS provides an integrated approach to obtaining regulatory, ethics and governance approvals NIHR’s Co-ordinated Systems for gaining NHS Permissions (CSP) reduces NHS R&D approval times for studies run through the NHS Clinical Research Network model agreements, drawn up by the UK health departments, NIHR, and industry speed up the contracting process for clinical trials carried out in the NHS. 181 2012/0192 (COD), Proposal for a Regulation of the European Parliament and of the Council on clinical trials on medicinal products for human use, and repealing Directive 2001/20/EC Page 65 Of the various different requirements needed to conduct clinical research, AMS highlighted the need to obtain research permissions from every NHS trust participating in a trial as the major bottleneck.182 It recommended setting up a new national research governance service within HRA to provide a single portal for rapidly obtaining NHS R&D permissions. However, the Plan for Growth in March 2011183 made it clear that the Government sees NIHR’s CSP as the best way of speeding up NHS R&D permissions. It contained a requirement (from 2012) for NIHR to publish data showing how long it takes between a provider receiving a valid research protocol and recruiting the first patient into a study. It set a 70 day benchmark for this and, from 2013, performance against this benchmark will affect funding from NIHR. While NIHR’s CSP may reduce NHS R&D approval times, it is only open to research trials that are eligible for support by the Clinical Research Network. All clinical research trials that are fully funded by NIHR or some other government body such as a research council or by an NIHR non-commercial partner are automatically eligible for such support. Commercially funded trials may be eligible for such support and thus benefit from the CSP process. But the funder will have to show that the funding was open to all qualified researchers in England, and that the research is of high quality, benefits the NHS and takes account of the priorities, needs and realities of the NHS. Patentability of hES cells The European patent system The European Patent Convention (EPC) is a treaty signed by 38 European countries including all EU member states. It provides an autonomous legal system for granting patents operated by the European Patent Office (EPO). It enables a patent to be granted across all EPO signatories circumventing the need to apply to an individual national patent office such as the UK Intellectual Property Office (UKIPO). National courts are responsible for enforcing the patents; EU national courts are subject to the Court of Justice of the European Union (CJEU) which interprets and enforces approved legislation drafted by the EU. 182 183 A new pathway for the regulation and governance of health research, AMS, 2011 The plan for Growth, HM treasury and BIS, 2011 Page 66 Attempts to establish a single European patent system have been underway for 50 years. Although EPO can grant Europe-wide patents, post-grant patents are subject to national legislation. The goal of the unitary patent is to reduce the cost and time it takes to get a patent in Europe by establishing a centralised court system to deal with litigation of European patents. Under the current system, EPO sits outside EU jurisdiction. For instance, it is not bound by rulings of the CJEU, but chooses to align itself with them, and with other EU policy such as the so-called Biotech Directive.184 The Biotech Directive was adopted in 1998 to harmonise patent law for biotechnological inventions across Europe and encourage innovation within the field. It contains morality provisions that (among other things) state that uses of human embryos for industrial or commercial purposes shall be considered unpatentable. The provisions note that the commercial exploitation of such inventions is contrary to ordre public or morality. hES cells and the morality provisions In 2008, the Enlarged Board of Appeal at the EPO heard an appeal on a patent held by the Wisconsin Alumni Research Foundation (the WARF case). At issue was whether the EPC forbids the patenting of claims directed to hES cells which, at the time of filing, could only have been prepared by a method which necessarily involved the destruction of human embryos. The appeal board found that a product that necessarily involved the destruction of a human embryo could not be patented because this amounts to the use of an embryo for commercial or industrial purposes. Following the appeal board’s decision EPO adopted the position of allowing claims directed to hES cells filed after 9 May 2003. The significance of this date is that it represents the first time that an hES cell line was submitted to a stem cell bank. The logic of EPO’s position was that from this time onward, claims involving hES cells did not necessarily involve the (further) destruction of a human embryo because the cells could have been obtained from a stem cell bank. However, a ruling by the CJEU in October 2011 raised further doubts over the patentability of hES cell lines in Europe. 184 Directive on the legal protection of biotechnological inventions 98/44/EC POST Report March 2013 Stem Cell Research Greenpeace versus Bustle An NGO (Greenpeace) challenged a patent held by a German researcher (Professor Oliver Brustle) in Germany’s Federal Court of Justice. The patent in question concerned the use of neuronal precursor cells derived from hES cells to treat diseases such as Parkinson’s disease. At the heart of the Greenpeace case was whether the patent contravened the morality provisions of the Biotech Directive. The German court referred the case to the CJEU seeking advice on three questions. What is meant by the term “human embryos”? Specifically, is an hES cell isolated at the blastocyst stage to be considered a human embryo? What is meant by exclusion from patentability of “human embryos for industrial or commercial purposes”? Specifically, does this include use of hES cells for the purpose of research? If a patent does not explicitly mention using human embryos to derive hES cells, but their use is required, should the patent be granted? This question arose because the Bustle patent made no reference to how the hES cells were derived. The CJEU ruling On the first question, the CJEU took a wide view of the term “human embryo”, essentially ruling that it included all human (totipotent) cells that have the capacity to develop into a human being. This includes embryos that have been created by fertilisation as well as those created using techniques such as parthenogenesis or nuclear replacement (Chapter 2). However, the CJEU declined to rule on the specific question of whether an hES cell isolated at the blastocyst stage constituted a human embryo, noting that this was for the referring (German) court to decide. On the second question, the CJEU ruled that the use of embryos for scientific or medical research is not patentable in itself unless it is associated with an invention which can be useful to embryos. And on the final question, the CJEU ruled that inventions which require the prior destruction of human embryos, or their use as base material, are not patentable even if the patent does not refer to their use. POST Report March 2013 Stem Cell Research Implications for patentability Taken together these rulings have significant implications for the patentability of inventions involving hES cells in Europe. In June 2012, the European Patent Office (EPO) published new guidelines for patent examiners to take account of the rulings.185 The following month the UKIPO published new guidelines for patent applications relating to biotechnological products.186 Broadly speaking, under the new guidelines: Inventions using hES cells, the derivation of which has involved the destruction of a human embryo at any point in the past, cannot be patented. This includes all current hES cell lines plus any cell lines derived by methods such as nuclear transfer or parthenogenesis. Inventions that use human embryos for industrial or commercial purposes (including research) cannot be patented. The sole exception is if they involve therapeutic or diagnostic purposes which are applied to the human embryo and are useful to it. Inventions using human iPS cells can be patented (because they have been derived by reprogramming adult cells rather than by destruction of an ‘embryo’). Inventions using stem cells derived from adults can be patented (because this does not involve the use or destruction of human embryos). Non-destructive methods One interesting test for the new guidelines is the availability of methods for deriving hES cell lines from human embryos (see Box 6.3) that do not involve destruction of the embryo. The existence of such nondestructive methods raises the question of whether claims directed at hES cells derived using such methods are patentable in Europe. 185 186 http://documents.epo.org/projects/babylon/eponet.nsf/0/6c 9c0ec38c2d48dfc1257a21004930f4/$FILE/guidelines_for_examination_2 012_part_g_en.pdf Examination Guidelines for Patent Applications relating to Biotechnological Inventions in the Intellectual Property Office, UKIPO, July 2012 Page 67 Box 6.3 Non-destructive derivation of hES cell lines In 2006, a paper was published detailing a method of deriving hES cell lines from single cells taken from a human embryo.187 The method used was very similar to that used for pre-implantation genetic diagnosis (PGD). In this proof of principle study, single cells removed from human embryos were cultured overnight and used to derive two hES cell lines. Both cell lines proliferated in an undifferentiated state for more than eight months and expressed normal markers of pluripotency. The method has been patented and commercialised by an American company, Advanced Cell Technology. It is currently being considered by the National Institutes of Health as an alternative source of pluripotent stem cell lines. The embryos from which the single cells were taken were not allowed to develop further in this study. However, the authors suggest that the technique’s similarity to PGD means that the embryos would be undamaged by the procedure and capable of developing normally if implanted into a woman. PGD has been widely used to select embryos for implantation that are free from specific genetic disorders. It has been shown to be safe and effective and to have no impact on the development potential of the embryo. Prior to the publication of the new guidelines it was widely thought that such claims might be patentable because they did not result in the destruction of an embryo. However, the new UKIPO guidelines make it clear that they are not. It states that “claims to methods and processes where stem cells are obtained from an embryo yet the embryo remains intact are also excluded as even though the embryos are not destroyed, it is still considered to be used for an industrial or commercial purpose”. The new guidelines have not been challenged in a national court or in an EPO Board of Appeal. Wider implications In the immediate aftermath of the Bustle vs Greenpeace case there was speculation that the inability to gain intellectual property rights in Europe would drive stem cell research abroad. However, this is not necessarily the case. For instance, inventions arising from stem cell research conducted in Europe can still be patented elsewhere. Furthermore, stem cell researchers may be still be able to gain intellectual property rights on their inventions within Europe by seeking patents on downstream processes instead of the cell lines.188 For example, Europe’s first clinical trial using hES cells (testing a UK-developed treatment for age related sight loss) is not affected by the ruling as the researchers patented the method of delivering the hES cells to the back of the eye rather than the cells themselves. Finally, it has also been suggested that making Europe a “patent-free zone” for hES cells might stimulate rather than stifle innovation and research. 187 188 Klimanskaya I et al, Nature, 444 (7118), 481-485, 2006 Nature 478, 441, 2011 POST Report March 2013 Stem Cell Research Page 68 Box 6.4 Tumour stem cells The idea that cancers could be caused and sustained by populations of abnormal stem cells (tumour stem cells) first arose in the late 1990s. Experiments in mice with leukaemia showed that a subpopulation of leukemic cells were capable of initiating tumours when injected into normal (but similar) mice. Since this time, evidence has emerged that a range of solid tumours also contain sub-populations of cells capable of initiating tumours when injected into healthy animals. Whether or not this constitutes proof of tumours being caused and sustained by tumour stem cells has been hotly debated in recent years. At the heart of the debate has been whether the act of transplanting tumour cells from one animal to another changes the behaviour of the cells. More recently, researchers have looked at tumours of the skin,189 gut190 and brain191 in mice using labelling techniques that allow the origin of cells to be traced back. In each case, they found that large populations of tumour cells originated from small subsets of cells that they hypothesised were tumour stem cells. If this hypothesis turns out to be true, it would have major implications for the way that tumours were treated. For example, it would mean that a successful treatment would have to specifically target the subset of tumour stem cells. 3.9 Commercialisation Regenerative medicine is one of the areas identified as a key UK growth opportunity for the 2020s by the Government Office for Science Foresight programme.192 This section looks at the: current state of UK stem cell research compared to other countries the number and type of companies developing cell therapies various different business models by which stem cell research could be commercialised some of the main challenges that need to be overcome during the commercialisation process the UK life sciences strategy. Current state of UK stem cell research One of the reasons why stem cell research is seen as a future growth opportunity is the strength of the UK research base in this area. Evidence for this comes from an analysis of primary peer-reviewed papers on regenerative medicine193 commissioned by BIS in 2011. The study looked at papers on stem cells (including tumour stem cells, see Box 6.4), stem cell transplantation, tissue-engineering and regenerative medicine. It found that the UK is producing world class research which has a significant impact across the field. 189 190 191 192 193 Driessens G et al, Nature, 488, 527–530, 2012 Schepers A et al, Science, 337 ( 6095), 730-735, 2012 Chen J et al, Nature, 488, 522–526, 2012 www.bis.gov.uk/assets/foresight/docs/general-publications/10-1252technology-and-innovation-futures.pdf A bibliometric analysis of regenerative medicine, Evidence, Thomas Reuters (www.bis.gov.uk/assets/BISCore/innovation/docs/B/11-1059bibliometric-analysis-of-regenerative-medicine.pdf) However, the field is getting increasingly competitive with a rapid increase in the total volume of papers published between 2005 and 2009. While this increase in volume has been faster in Asia than in either North America or Europe, the USA is still recognised as the world leader. UK policy has been to support research across the full field to maximise the likelihood of medical advances being made.194 As discussed in more detail later, the Government has committed to continue to support this sector in the long-term. Businesses and business models Turning stem cell research into cell-based therapies will require businesses to participate in translational research and clinical trials. The Regenerative Medicine in Europe (REMEDiE) project is an EU-funded programme that has tracked developments in the stem cell field. One of its strands has been to track the number and type of businesses involved in the area and to identify the different possible business models. Businesses Data from the REMEDiE project shows that the regenerative medicine sector is dominated by companies in three geographical locations: North America, Europe and the Far East. In total, North America has the most regenerative medicine companies (183) followed by Europe (145) and the Far East (37). In each case most of the companies are small or medium enterprises (SMEs, see Table 6.2) with only a small number of large pharmaceutical companies (‘big pharma’) getting involved at this stage. Within Europe, most of the companies (big or small) are located within the UK, Germany or France. Business models The REMEDiE project also looked at the type of products under development by SMEs and ‘big pharma’.195 It identified three distinct cell therapy business models: service model, where a clinic treats a patient with cells taken from the patient’s own body product model, where stem cells are used to make product that can treat many patients tissue matching model where banked stem cells are matched to the patient. 194 195 Taking Stock of Regenerative Medicine, BIS/DH, 2011 (www.bis.gov.uk/assets/BISCore/innovation/docs/T/11-1056-taking-stockof-regenerative-medicine.pdf) www.york.ac.uk/media/satsu/res-remedie/remedie-policy-brief.pdf POST Report March 2013 Stem Cell Research TABLE 6.2 COMPANIES BY LOCATION196 North Europe Far East America Total companies 183 145 37 Of which SMEs 167 132 34 Of which ‘big 16 13 3 pharma’ Service model Using the patient’s own cells for therapy is known as autologous therapy. In the simplest form, this might consist of harvesting a selected population of cells from the patient (such as mesenchymal stem cells), multiplying up the cell number, and then re-introducing them to a diseased site in the patient’s body. In more complex guises, such a therapy might include one or more manipulation steps, whereby the harvested cells are differentiated, engineered or manipulated in some other way before re-introduction into the patient’s body. Examples of this type of therapy were given in Chapter 5 and include use of mesenchymal stem cells to treat bone/cartilage disease, heart disease, diabetes or neurodegenerative disorders. Autologous therapies account for the vast majority of approaches being developed by SMEs in Europe and elsewhere. The approach has a number of advantages. For instance, using the patient’s own cells sidesteps the problem of immune rejection. Furthermore, such approaches require lower levels of capital investment than that needed for the development of new drugs. Finally, trials of such approaches are usually fairly straightforward from a regulatory perspective, although this will vary depending on the extent of manipulation of the cells. This means that it may be possible to move promising research from the laboratory to the clinic relatively rapidly. A disadvantage of this approach is that there is less scope for companies to protect their investment in research by securing intellectual property rights for their therapy. Rather than developing a single product that can be used for many patients, companies are developing a service that can be applied to individuals. In this respect, the delivery of autologous therapy is envisaged as being comparable to the way that IVF clinics operate. 196 Taking Stock of Regenerative Medicine, BIS/DH, 2011 Page 69 Product model Using stem cells to develop a single product that can be used to treat many patients is known as allogenic therapy. In many respects this is more like the standard pharmaceutical model of product development and delivery where companies seek intellectual property rights to protect their research investment. It is these types of products that the big pharma companies are interested in developing. An example is the use of stem cells to treat age-related macular degeneration (AMD), an approach that is currently in clinical trials and was outlined in Chapter 5. The main disadvantage of this approach is the risk of immune rejection, because the cells used for therapy are not from the patient receiving the treatment. They are thus likely to be recognised by the patient’s immune as foreign and attacked. As noted in Chapter 5), this is not a problem for (immunologically privileged) areas of the body such as the central nervous system where the immune system is effectively switched off. Other disadvantages include the fact that capital investment costs are high and product development times are long. Patient matching A third type of model identified by the REMEDiE project was a model where stem cells are cryo-preserved and banked. Patients needing cell therapy are tissue typed, and cells that closely match their profile are used for therapy. This kind of approach is similar to that used for skin grafts such as Apligraf, a commercial product derived from human cells that is used to treat venous ulcers (see Box 5.5 in Chapter 5). Such approaches can minimise (but not eliminate) problems with immune rejection. However, they require significant investment to set up and maintain the cell banking infrastructure. Indirect commercial applications In addition to the three business models discussed above, stem cells can be used for a variety of other commercial applications. For instance, iPS cells have been used to model a wide range of diseases (Chapter 4). Such models can be used to develop a better understanding of the underlying causes of a disease as well as to rapidly screen potential new treatments. Stem cells can also be used to screen potential new drugs for possible toxicity effects. Such an approach may reduce the number of animals used in toxicity testing and help to produce safer medicines. A collaboration between government, academia and industry − Stem Cells for Safer Medicines − was launched in 2008 to explore the use of stem cells in early drug discovery. Public sector funding is coordinated by the Technology Strategy Board (TSB) with funding from MRC, BBSRC, ESRC and DH. POST Report March 2013 Stem Cell Research Page 70 197 FIGURE 6.1 UK MEDICAL BIOTECH PIPELINE Figure 6.1 UK Medical biotech pipeline Taken together, pharmaceutical companies hope that the use of cell-based models for safety and efficacy will save them time and money in the development process. A particular aim is to reduce the number of drugs that fail the most expensive (phase III) part of the clinical trials process. Barriers to commercialisation The Government’s Strength and Opportunity 2011 report highlighted a strong and resilient UK life sciences sector.198 It identified a total of 841 new biomedical products under development in the UK (Figure 6.1). Of these around half (423) were biotech products (antibodies, proteins, etc.) or advanced therapy products (gene therapy, cell therapy). However, as shown in Figure 6.1, most of these are in the discovery/preclinical phase, with only a small proportion in the translational research stage (phase I or II) and a tiny proportion being in the later stages (phase III, regulatory filing) of commercialisation. Aside from the regulatory issues discussed previously, the other main barrier to the commercialisation of cell therapy in the UK is the lack of funding available to move promising research from the lab, through clinical trials, and into the NHS.199,200 For conventional drugs or biotech treatments the source of such funding would normally be pharma/biotech companies. However such companies are being cautious. On the one hand, they are looking to diversify into new areas with the decline of the so-called blockbuster drugs that have generated their funding for further R&D in the past. On the other hand, a range of uncertainties mean that, for the time being, many companies are playing a waiting game with respect to cell therapy. These uncertainties include: 197 198 199 200 Strength and Opportunity 2011, BIS, 2011 Strength and Opportunity 2011, BIS, 2011 (www.bis.gov.uk/assets/biscore/innovation/docs/s/11-p90-strength-andopportunity-2011-medical-technology-sectors.pdf) www.york.ac.uk/media/satsu/res-remedie/remedie-policy-brief.pdf Taking Stock of Regenerative Medicine, BIS/DH, 2011 the limited evidence of efficacy currently available from clinical trials of cell therapy the fact that cells are more difficult to scale up and manufacture to the required standards than small molecule drugs or protein-based biotech treatments continued uncertainty about the regulatory requirements for cell based therapy concerns about the patentability of hES cell-based therapy in Europe. These uncertainties mean that government support and funding is needed to help drive the commercialisation of cell-based therapy in the UK. In December 2011, BIS launched its UK life sciences strategy.201 Its aim is to develop the infrastructure to link UK academic researchers with industry, investors, clinicians and the NHS. The following sections look at progress in implementing those parts of the strategy most relevant to stem cell research and cell-based therapy. UK life sciences strategy Implementation of the UK life sciences strategy has focused on 5 areas: research, clusters and collaborations investment and incentives streamlining regulation people infrastructure. Research, clusters and collaborations Cell Therapy Catapult A key component of the strategy is the establishment of a Cell Therapy Catapult at St Guy’s and St Thomas’ Hospital in London. Core funding for the Catapult is from the Technology Strategy Board (TSB) which is providing £10 million per year over 5 years. Its aim is to identify cell therapy research projects with high growth potential and drive them through the translational research stage so that they are ready for phase III clinical trials. It is hoped that the demonstration of successful projects will stimulate inward investment, and help to grow a UK cell therapy industry. 201 Strategy for UL Life Sciences, BIS, 2011 (www.bis.gov.uk/assets/biscore/ innovation/docs/s/11-1429-strategy-for-uk-life-sciences.pdf) POST Report March 2013 Stem Cell Research UK Regenerative Medicine Platform To assist the Catapult in identifying opportunities for commercialisation, the Research Councils have established a £25 million UK regenerative medicine platform. The platform will fund interdisciplinary research hubs such as the new NIHR biomedical research centres and units. Once the Catapult has identified promising research projects, it can ease the project through the translational research stage. This will involve identifying leading clinicians in the area, helping the researchers through the regulatory requirements, and giving assistance with manufacturing, supply and scale-up. Finally, the Catapult can help with commercialisation issue such as licensing, intellectual property and identifying investment partners for phase III clinical trials. UK strategy for regenerative medicine In parallel with the life sciences strategy the Research Councils and TSB have collaborated to develop a strategy for UK regenerative medicine.202 This includes a joint MRC/TSB Biomedical Catalyst Fund to support translational research by academics or SMEs (discussed below). Another key part of the strategy is the support of underpinning research through response mode funding. Among the areas identified for such funding are improved understanding of: cellular reprogramming differentiation and ageing disease and repair mechanisms stem cell niches the extracellular environment genetic instability harnessing immune responses advanced bio-processing development of predictive models for innovation and value systems. Clinical and research data Another key strand of the UK life science strategy is opening up clinical and research data. For example, MHRA and NIHR have invested £60 million in a clinical practice research data link. This gives biomedical researchers access to anonymised patient data for clinical trials or other studies. It is hoped that making such data more accessible will strengthen the UK’s position as a country for conducting biomedical research. Page 71 Patients can also benefit from the opening up of data. For instance NIHR supports a clinical trials gateway website that provides patients with easy to understand information about clinical trials currently being conducted in the UK.203 Patients and their doctors can search the site to see whether there are any trials that might be of benefit to them. Investment and incentives Biomedical Catalyst Fund The availability of funding for translational research has been a significant barrier to cell therapy. To address this, the MRC/TSB Biomedical Catalyst Fund was launched in April 2012. The fund is a £180 million programme to support translational research from concept to commercialisation. It is available to UK SMEs and academics either individually or in collaboration. So far funding of around £10 million has been awarded through the program. MRC has awarded £7.41m of funding to 14 UK universities for around 150 projects, while TSB has awarded £2.45m to SME-led projects. Applications are currently being accepted for a second round of funding. Promotion and inward investment Global marketing of the UK as a place to conduct life science research is seen as an important part of the life sciences strategy. Activities here include the UK hosting the 2012 Healthcare and Life Sciences Global Forum in August. UK Trade and Investment is also: developing a tool that can be used by the government, companies and trade associations to promote investment in UK life sciences running targeted business development campaigns to highlight recent advances in UK capabilities creating a venture capital unit to encourage investment into UK companies and funds. Patent Box Other incentives include the Patent Box announced in the 2012 Budget.204 This will be phased in from 2013 and provides companies with a reduced rate (10%) of corporation tax on profits from patents and certain other types of intellectual property. 203 202 A UK Strategy for Regenerative Medicine, MRC, BBSRC, EPSRC, ESRC, TSB, March 2012 204 www.ukctg.nihr.ac.uk/default.aspx The Patent Box: Technical Note and Guide to the Finance Bill 2012 clauses, HM Revenue and Customs, November 2012 POST Report March 2013 Stem Cell Research Page 72 Streamlining regulation Proposals for streamlining of the regulation of health research were discussed earlier. At the European level this includes the revision of the Clinical Trials Directive. At the UK level, key priorities are establishing HRA as a non-departmental public body, simplifying the process for obtaining NHS R&D permissions and making decisions on the future regulation of embryo research and of research that uses human tissue. In addition to these, MHRA is looking at ways of reducing the burden of regulation on researchers and SMEs. It has published guidance on its website about schemes that that support drug development, licensing and patient access to innovative therapies.205 These include schemes that: Allow an unlicensed medicine to be used for the treatment of a single patient under certain circumstances, such as if a suitable licensed medicine is not available in the UK. Result in fast tracked assessments for new medicines. Companies may apply for fast tracking if they can show that a medicine would provide a major breakthrough in the treatment of patients for certain conditions. Allow patients earlier access to medicines. MHRA recently consulted on a scheme that would allow patients access to promising new (unlicensed) medicines for treating life-threatening diseases. The scheme is envisaged as applying to just one or two medicines a year that have passed through phase III clinical trials but are not yet licensed. People Another implementation strand in the life science strategy is to ensure that the UK is able to develop, recruit and reward the best talent in the life sciences sector. To this end, NIHR has funded three rounds of recruitment for its new research professorships. The scheme is open to Higher Education Institutions in partnership with NHS organisations based in England. It is looking to recruit researchers who are at a relatively early stage in their careers and have an outstanding record of clinical and applied health research and its effective translation for improved health. Successful nominees receive a package to support a Professorship, a Post-Doctoral appointment, research running costs, a travel fund, access to the NIHR Leadership Programme and the opportunity for a sabbatical, as well as basic salary and indirect costs. 205 www.mhra.gov.uk/Howweregulate/Medicines/Licensingofmedicines/ Regulatory schemes that support drug development licensing and patient access to innovative therapies/EUschemes/index.htm The first two rounds are now complete. Eight new professorships were awarded in the first round (2011) and this included one award where the research interests included cell therapy approaches. The second round (2012) resulted in five further awards, with up to this number being available in the final round (2013) which closes in December 2012. The successful applicants cover a very wide range of research interests. In addition to developing clinicians and researchers, trained support staff will be needed if cell-based therapy is to become more widespread. These will need to include engineers and production staff who are trained in good manufacturing practice (GMP) for the production of cell-based products. The BIS review of regenerative medicine published in 2011 suggested that the number of staff with the necessary core skills and knowledge to deliver regenerative therapies was limited.206 A recent initiative here is the Society of Biology’s degree accreditation programme which aims to address concerns about the quantity and quality of practical training, numerical and analytical skills offered by biological degrees. Another initiative accredited by the University of Kent and run by the company Cogent is the high level apprenticeship for professional technicians launched in February 2012 that aims to provide an alternative pathway to enter the life sciences industry at the technician level. Infrastructure If cell-based therapy is to become more widely used, then the UK will need to develop infrastructure to: supply clinical grade cell lines manufacture and process cells in accordance with good manufacturing practice (GMP) for phase I clinical trials and then scale up manufacture for later phase clinical trials store, distribute and deliver cells for use in cell therapy facilities. Cell supply The UK Stem Cell Bank is currently focused on generating clinical-grade hES cell lines to supply phase I clinical studies. The MRC has invested £3 million in three derivation centres with the aim of providing 25 hES cell lines to the Bank. As noted in Chapter 4, the first xenofree (grown without the use of animal cells or products) hES cell lines have now been deposited. The UK Stem Cell Bank is also leading an international initiative to standardise global approaches to the validation and distribution of clinical-grade hES cell lines. Continued support for the UK Stem Cell Bank will be necessary if the UK is to develop and grow a cell therapy industry. 206 Taking Stock of Regenerative Medicine, BIS/DH, 2011 POST Report March 2013 Stem Cell Research Cell manufacture Cells are difficult to grow in a reproducible way. The manner in which a cell is grown will affect its properties as a therapeutic agent. This means that, for cell therapies, manufacturing is a vital consideration from a very early stage of the development process. The manufacturing stage must be able to reliably and reproducibly propagate, expand and differentiate cells to produce a well characterised, pure and safe cell population of known potency.207 In the first instance, relatively small batches of cells will be needed for research and phase I clinical trials. But as the development process continues, manufacturing will need to be scaled up to provide cells for later stage (phase II and III) trials and ultimately for therapeutic purposes. Research into some of the problems posed by reproducible cell manufacture has been supported by the Biomedical Catalyst Fund and the British Standards Institution recently published guidelines on the characterisation of human cells for clinical use.208 Furthermore, the Cell Therapy Catapult is specifically designed to drive promising cell therapy projects through the manufacturing and scale-up stages while complying with regulatory requirements. However, if such initiatives do succeed in helping to establish and grow a UK cell therapy industry then further manufacturing infrastructure will be required. A survey conducted by the ATMP Manufacturing Community in 2011 found that the UK currently has 12 MHRA-licensed facilities for ATMP manufacture and that a further eight are planned.209 It concluded that this relatively wide distribution of small facilities matched the current need to supply research projects and phase I clinical trials. But it noted that more capacity is likely to be needed in the future. This increased demand could come from an increase in the use of autologous cells for therapy. In this case, the demand would be for more, smaller, facilities attached to NHS hospitals. Alternatively (or additionally) there could be a demand for larger, high throughput manufacturing facilities for the production of allogenic cells. The development, accreditation and standardisation of such large-scale cell culture facilities is likely to present “significant technical and regulatory challenges”.210 207 208 209 210 A UK Strategy for Regenerative Medicine, MRC, BBSRC, EPSRC, ESRC, TSB, March 2012 BSI Characterization of human cells for clinical application PAS 15 93, 2011 Foley L et al, Regenerative Medicine, 7(3), 285–289, 2012 A UK Strategy for Regenerative Medicine, MRC, BBSRC, EPSRC, ESRC, TSB, March 2012 Page 73 Cell storage and distribution Looking further ahead, if cell therapy is to become an established part of the NHS landscape, then further infrastructure will be needed for cell storage, transport and distribution to clinics. The experience and facilities of the NHS Blood and Transplant Authority could form the basis for such infrastructure. However, this will require further research into areas such as storage processes as cryopreservation and cell hibernation. While, cryopreservation protocols have been developed for a wide range of stem cells (including hES cells), many involve the use animal products which render them unsuitable for clinical use. 6.3 Potential benefits and risks of cell therapy Potential applications of stem cell research have been referred to throughout this report. To recap, these can be grouped into the following categories: acellular products endogenous repair use of cells for drug testing or as toxicity platforms use of autologous or allogeneic cells for therapy. The following sections look at some of the potential benefits and risks of these approaches. Acellular products Acellular products are medical devices that are used to provide a matrix which can regenerate damaged tissue when naturally repopulated by human cells and blood vessels. They include both natural and synthetic products. Examples include: AlloDerm Regenerative Tissue Matrix. This is a commercially available product made from donated human skin which has been aseptically processed to remove the epidermis and any other cells that may cause problems with immune rejection. The resulting biological matrix can be used in procedures such as hernia repair, abdominal wall repair and breast replacement following mastectomy. Actifuse is another example of a commercially available product that can be used to promote bone repair. It is a synthetic silicate matrix that can be used to fill gaps and voids in bone. In animal studies, it has been shown to encourage the growth of new bone and the development of capillary blood vessels, while the matrix itself is slowly resorbed. Evidence from the clinical use of such products suggests that they are well tolerated and safe. The absence of cells in the transplanted matrix means that there is minimal risk of immunological problems such as rejection. However, effectiveness can vary significantly from one patient to another, with some showing significant benefit and others exhibiting little or no response. POST Report March 2013 Stem Cell Research Page 74 Endogenous repair There is considerable interest in using small molecules, proteins or other factors to stimulate the body’s own (endogenous) repair mechanisms to regenerate tissue. Examples already in widespread clinical use include: Using granulocyte-colony stimulating factor to mobilise blood (haematopoietic) stem cells after chemotherapy. This rapidly increases the number of white blood cells (neutrophils) and helps to protect against bacterial infection. Using erythropoietin to stimulate red blood cell production in patients suffering from severe anaemia. This includes cancer patients who receive radiation or chemotherapy and those with chronic kidney disease. Numerous other factors to stimulate endogenous repair are the subject of research. For example, studies have looked at thymosine beta-4, a small protein (peptide) that may be able to reactivate cardiac progenitor cells to repair damaged heart tissue following a heart attack.211 There is also interest in the use of leukaemia inhibitory factor to stimulate the self-renewal of neural stem cells and the proliferation of various glial cells.212 The interest here is that harnessing such cells to boost myelin protein production may prove effective in treating diseases such as multiple sclerosis. The pharmaceutical sector is interested in such approaches because they are a good match with its expertise and its existing business model. In principle, factors that stimulate endogenous repair pose no greater risk than those raised by conventional small molecule or current biotech treatments, and the current regulatory system is well equipped to assess such risks. Future success in this area will depend on continued research to improve understanding of the signalling pathways and factors that control endogenous repair mechanisms. Cells for screening and testing Another use of stem cells is for testing the efficacy and toxicity of potential new drugs. As discussed in Chapter 4, hiPS cells may prove to be particularly valuable for the screening of efficacy because they can be used to create models for a wide range of diseases (see Table 4.2 for examples). The iPS cells can be differentiated into cells of the type predominantly affected by the disease. Such models can lead to better understanding of the underlying mechanisms behind a disease and allow drug developers to develop potential new treatments for it. These can be screened for efficacy using the disease model. Promising new treatments can also then be screened for toxicity against a range of cell populations such as kidney cells, liver cells and heart cells. Such approaches have a number of advantages. They can provide models of disease in tissue that otherwise may be inaccessible for study (such as brain or heart tissue). They provide a platform for the rapid screening of large numbers of potential new drugs for efficacy and safety. And they can identify potential toxicity problems at an early stage of drug development before expensive clinical trials have been started. There are no additional risks as such associated with using stem cells for safety and toxicity testing during drug development. Pharmaceutical companies will still have to do conventional toxicity testing and clinical trials to show that a new drug is safe and effective. However, there is some scope for improvement of existing disease models. For example, some diseases are particularly difficult to model using hiPS cells; Franconi anaemia and Fragile X syndrome are two examples of such diseases discussed in Chapter 4. And the cell populations resulting from current differentiation and expansion systems tend to be immature cells of varying purity. Progress in addressing such issues would be widely applicable across the whole field of cell therapy and regenerative medicine. Cell therapy The benefits and risks of cell therapy depend on the whether the therapy uses the patient’s own cells (autologous therapy) or uses cells from another person (allogeneic therapy). Within these categories the benefits and risks may vary depending on how the cells were derived and the extent to which they have been manipulated before being used for treatment. 211 212 Crockford D et al, Ann N Y Acad Sci 1194, 179–89, 2010 Deverman B and Patterson P, The Journal of Neuroscience, 32(6), 21002109, 2012 POST Report March 2013 Stem Cell Research Autologous therapy Simple autologous therapy In its simplest form, autologous therapy involves taking cells from a patient’s body, processing them and reintroducing them into the patient. Examples of this type of approach include using haematopoietic stem (HS) cells following chemotherapy for treating lymphoma or multiple myeloma, use of HS cells following acute myocardial infarction (heart attack), use of keratinocytes for treatment of burns and the use of chondrocytes and mesenchymal stem cells for cartilage repair. The main advantage of such approaches is that there is little risk of immune rejection of the cells and, in the trials reported to date, relatively low risk of other serious adverse effects. However, such treatments tend to be relatively expensive because they are tailored to individual patients. Moreover, the approach is limited to readily accessible cells such as mesenchymal stem cells, HS cells and keratinocytes. There is on-going debate about just how much of a limitation this is in practice. As described in Chapter 4, a very wide range of cell types can now be derived from stem cells that are readily accessible in the human body. Overall, the evidence from clinical trials on the benefits of such treatments is variable. In some cases, such as use of HS cells following chemotherapy for cancer treatments, there is good evidence of clinical benefit and the treatments are well established. In other cases, such as the use of HS cells following heart attack, the evidence of long-term clinical benefit is less clear cut. There is evidence that the HS cell treatment improves short-term measures (reducing tissue damage and maintaining heart function). But small study sizes and variations in patient selection, stem cell delivery (timing and dose) and patient follow up mean that the evidence for increased long-term survival is variable.213 Advanced autologous therapy Looking further ahead, it is likely that more advanced autologous therapies will be developed. Researchers might develop treatments based on differentiated and purified cell populations derived from autologous cells, or even genetically modify autologous cells to improve their efficacy. 213 www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal. pone.0037373 Page 75 For instance, circulating angiogenic (CA) cells from patients with coronary artery disease have limited regenerative capacity. Researchers recently showed that the regenerative capacity of these cells can be restored by genetically modifying them to over-produce a signalling factor (nitric oxide).214 This raises the possibility of using genetically modified autologous CA cells to treat patients with coronary artery disease. However, the greater the extent of manipulation applied to an autologous cell before it is re-introduced into the body, the greater the potential risks associated with the therapy are likely to be. This in turn means that it is likely to be much more difficult to gain regulatory approval for a clinical trial involving an advanced autologous therapy than it is for a trial involving a more straightforward therapy. hiPS cells In theory at least, hiPS cells could be used for autologous therapy. Adult cells from the patient could be reprogrammed into hiPS cells, and these could then be used to derive a very wide range of cell types for use in autologous therapy. On the face of it such an approach would appear to offer the best of both worlds. It has the advantage of lack of immune rejection associated with autologous therapy. And it has the advantage of being able to generate the widest possible range of cell types usually associated with allogeneic hES therapy (see next section). However there are two main drawbacks that make it highly unlikely that hiPS therapy will be used in the near future. First, the derivation of hiPS cell lines from individual patients is likely to be very expensive and time consuming, which may limit their clinical utility. For instance, techniques that take weeks to yield enough cells for treatment are unlikely to be useful for treating conditions such as heart attack or stroke. Second is the continued uncertainty about the safety and efficacy of cell populations derived from hiPS cell lines. This was discussed in Chapter 4, where it was noted that hiPS cell lines show very subtle differences in their characteristics when compared with hES cell lines. Researchers believe that hiPS cells retain an ‘epigenetic memory’ of their former state. It is not clear what impact these subtle differences would have on the safety or efficacy of hiPS-derived cells. But their very existence means that for the immediate future hiPS cells are best considered as useful disease models rather than likely candidates for cell therapy. 214 Ward M et al, Molecular Therapy, 19 (7), 1323–1330, 2011 POST Report March 2013 Stem Cell Research Page 76 Allogeneic cell therapy In some respects, allogeneic cell therapy is a well established treatment. For instance donor HS cells have been used for many years to treat patients suffering from various forms of leukaemia. A combination of tissue matching between the patient and donor (often a close relative) and immune suppressing drugs are used to minimise problems with immune rejection. However, in other respects allogeneic cell therapy lags behind autologous therapy. The big hope is that cell lines derived from pluripotent hES cells will eventually lead to better treatments for a wide range of diseases. In the last couple of years, clinical trials of this new generation of allogeneic cell therapy have started to gain regulatory approval and recruit patients. Examples of such trials were detailed in Chapter 5 and include: Geron’s trial for treatment of spinal cord injuries (now discontinued) Applied Cell Technology’s trials using retinal pigment epithelium derived from hES cells to treat Stargardt’s Macular Dystrophyand age-related macular degeneration (AMD) The London Project for curing blindness backed by Pfizer has applied to conduct a trial using hES derived cells to treat AMD California Stem Cell has applied for a licence to conduct a clinical trial using hES derived cells to treat type 1 spinal muscular atrophy. Main advantages Among the key advantages of these allogeneic cell therapies is that researchers can use hES cells to derive the full range of human cell types, so in principle at least the treatments are applicable to a wide range of diseases affecting different parts of the body. A further advantage is that the approach fits neatly with the current pharmaceutical business model; a company investing in such research has a product that it can potentially sell to recoup its investment. Disadvantages However, a major downside is how well such therapies are tolerated by the patient’s immune system. This may be less of an issue in parts of the body that are immune privileged such as parts of the central nervous system. This special status is thought to be a defence mechanism to protect highly sensitive parts of the body with a limited capacity for regeneration from the damage that an immune response could cause. It is no coincidence that all of the most advanced trials and planned trials of allogeneic cell therapy target immune privileged sites of the body, where the treatments are expected to be well tolerated. Tissue matching So what are the prospects for allogeneic therapies that target body systems that are not immune privileged? The experience with using HS cells in combination with tissue matching and immune suppression to treat various forms of leukaemia suggests that the problems of immune rejection are not insurmountable. An individual’s immunological identity consists of two main components: their blood type and their human leukocyte antigen (HLA) profile. HLA’s are proteins (antigens) found on the outer surface of cells and are the main cause of immune rejection of organ transplants. An approach where hES cells representing all of the main blood groups and HLAs were derived and banked would allow accurate tissue matching between the cells used for therapy and the patient. Depending on the exactness of the match required, it has been estimated that a bank containing as few as 10 and no more than 150 hES cell lines could provide adequate coverage.215 Novel methods Other strategies for minimising immune rejection of allogeneic therapy have also been suggested. For example, the California Institute for Regenerative Medicine is funding a group of researchers trying to develop a treatment for diabetes using beta cells derived from hES cell lines.216 The group has reported successful results from using novel encapsulation methods to ‘hide’ the transplanted cells from the host’s immune system. The encapsulation method is permeable to small molecules such as signalling factors and small peptides such insulin, does not itself elicit an immune response and prevents the cells of the host’s immune system accessing the transplanted beta cells and recognising them as foreign. Cell therapy and clinical trials The coming years are likely to see an increase in the number of cell therapies being investigated in clinical trials. Irrespective of the approach used – autologous or allogeneic – such therapies pose a number of challenges for the clinical trial regulatory system. Regulators want details of a drug’s potency, purity and dose. Such concepts are difficult to translate into the world of cell therapy. How does one measure the potency of a complex, multi-functional structure like a cell? How does one define dose for a product that is capable of multiplying? Or define purity in a population of cells that is capable of differentiation? 215 216 Taylor C et al, The Lancet, 366 (9502), 2019-2025, 2005 http://www.cirm.ca.gov/content/cell-therapy-diabetes POST Report March 2013 Stem Cell Research Such considerations mean that clinical trials may need to adapt to the new challenges posed by cell therapy. Researchers may need to develop better biomarkers to track cells in the body and allow a more accurate estimation of the extent of therapeutic effect. They need better methods of cell sorting to achieve ‘pure’ populations of cells. But at the same time the regulatory system may have to develop more flexibility about the design of clinical trials to reflect the special challenges posed by cells. 6.4 Where next? Much has happened since the House of Lords Stem Cell Research Committee published the report of its inquiry in 2002. Researchers have made huge leaps in understanding the factors that interact with DNA and its surrounding protein to control fundamental cellular processes such as the cell cycle, cell death, cell division and differentiation. These leaps mean that they can maintain embryonic stem cells in a pluripotent state or direct their differentiation down a specific lineage almost at will. They can reverse this process using a defined cocktail of transcription factors to reprogram adult cells back to pluripotent iPS cells. And, within limits, they can trans-differentiate cells from one lineage to another without going through a pluripotent stage. The next decade will likely see more of the same sort of advances in the laboratory. Researchers are rapidly reaching a stage where they can master the direction of cell fate in the laboratory. The efficiency with which iPS cells can be produced is likely to improve, and scientists are likely to learn more about the potential usefulness or limitations of such cells for therapy. Similarly, the range of cell lineages that can be produced by transdifferentiation is likely to increase. Such cells are a potentially useful source of cells for therapy as deriving them does not involve transition through a pluripotent stage and this minimises concerns about their safety. Researchers are also likely to pursue approaches where cells are used as the vehicle to deliver gene therapy. Few in the field doubt that these advances will lead to significant clinical benefits to patients. What is in doubt is how, when and where this will happen. It is likely that better models of disease provided by advances such as hiPS cells will suggest new targets for the stimulation of endogenous repair by conventional drugs or biotech products. The development of such products may be aided by the use of stem cells for safety and efficacy screening of potential new drugs. While the UK is well poised to exploit any such opportunities, such approaches are likely to take ten years or more. Page 77 To date much of the clinical trials activity in the area of cell therapy has focused on autologous therapy. In general, such trials have been small and the evidence of clinical benefit they have yielded has been variable. The next few years should see some of the more promising approaches progressing to later stage trials, possibly yielding more clear-cut evidence of clinical benefit. However, there are still questions about how to commercialise such approaches. The big hope for the coming decade is allogeneic cell therapy. Trials of such approaches have only recently started. In the first instance, the trials are principally designed to show how well tolerated the treatments are; any evidence of clinical benefit would be regarded as an added bonus. But a successful allogeneic trial could act as the catalyst to kick start further investment in such approaches. At present allogeneic cell therapy is confined to certain parts of the body that are more or less immune privileged. However, this could change if ways could be found to make the treatments more immunologically acceptable to the host. For the foreseeable future it is likely that such approaches will continue to depend on cells derived from hES cell lines. The UK government is currently funding research across the entire spectrum of these activities, investing in infrastructure and supporting translational research in activities such as manufacturing, scale up and bioprocessing. However, at some point in the coming decade or so, choices will have to be made and funding prioritised accordingly. POST Report March 2013 Stem Cell Research Page 78 A1 ACE AMD AMS AS ATMP BIS CJEU CQC CSP Annex A1 Acronyms Arts Council for England Age-related macular degeneration Academy of Medical Sciences adult stem (cells) Advanced therapy medicinal product Department for Business Innovation and Skills Court of Justice of the European Union Care Quality Commission Co-ordinated system for gaining NHS research permissions DH Department of Health EG embryonic germ (cells) EMA European Medicines Agency EPC European Patent Convention EPO European Patent Office ES embryonic stem (cells) EU European Union GAfREC Governance Arrangements for Research Ethics Committees GMP good manufacturing practice GTAC Gene Therapy Advisory Committee GVHD graft versus host disease GVT graft versus tumour (response) hAS human adult stem (cells) hEG human embryonic germ (cells) hES human embryonic stem (cells) HFE HFEA hiPS hMS HO HRA HS HSE HSCIC HTA iPS IRAS MHRA Human Fertilisation and Embryology (Act) Human Fertilisation and Embryology Authority human induced pluripotent stem (cells) human mesenchymal stem (cell) Home Office Health Research Authority haematopoietic stem (cells) Health and Safety Executive Health and Social Care information Centre Human Tissue Agency induced pluripotent stem (cells) Integrated Research Application System Medicines and Healthcare products Regulatory Agency MRC Medical Research Council MS mesenchymal stem (cell) mtDNA mitochondrial DNA NHSBT National Health Service Blood and Transplant NIHR National Institute for Health Research NRES National Research Ethics Service NTS nuclear transfer stem (cells) PS parthenogenetic stem (cells) REC Research Ethics Committee SHA Special Health Authority TEP Tissue engineered product TSB Technology Strategy Board UKSCB United Kingdom Stem Cell Bank POST Report March 2013 Stem Cell Research A2 Page 79 Annex A2 Glossary Blastocyst Blastomere BMP Early stage (5-7 days) of developing embryo consisting of trophoblast and inner cell mass One of the cells found in the inner cell mass of the blastocyst Bone morphogenic protein 4, a protein that plays a critical role as a signal factor in the early differentiation of the embryo Chorion One of the membranes that allows nutrients to pass from the mother to the developing embryo c-Myc A gene coding for a transcription factor that is one of the four factors used in reprogramming adult cells into iPS cells Ectoderm One of three types of tissue found in the early embryo that gives rise to the outer layer of skin and the central nervous system Embryoid bodies Clusters of embryonic stem cells that arise during cell culture and from which embryonic stem cell lines can be derived Endoderm One of three types of tissue found in the early embryo that gives rise to the lungs, liver, pancreas and other internal organs Epigenetic Refers to various mechanisms whereby environmental factors in the cell modify patterns of gene expression Gametes Sperm or eggs Histones Proteins found in close association with DNA in chromosomes; the histone-DNA association is one of the (epigenetic) mechanisms for controlling patterns of gene expression Inner cell mass The 200 or so pluripotent cells found inside the blastocyst from which embryonic stem cells can be derived Klf4 Krupple like factor 4, a transcription factor found in stem cells and one of the four factors used in reprogramming adult cells into iPS cells Mesoderm One of three types of tissue found in the early embryo that gives rise to the heart, kidney, blood system, bone and muscle Morula Early stage (3 days) of developing embryo containing totipotent stem cells Multipotent Stem cells that have the ability to give rise to some or all of the cell types found in the tissue they are associated with Nanog A key transcription factor involved in maintaining pluripotency and supporting self-renewal Oct 4 Octamer-binding transcription factor, a key factor in preventing differentiation and maintaining pluripotency and one of the four factors used in reprogramming adult cells into iPS cells Oligopotent Stem cells that have the ability to give rise to just a few different cell types Parthenogenesis A process that can stimulate an unfertilised egg into (temporarily) behaving as if it had been fertilised and from which parthenogenetic stem cells can be derived Pluripotent Cells that have the ability to give rise to all of the cell types found in the adult human body SHH Sonic hedgehog, a protein that plays a key role in patterning of the neural tube in early embryonic development Somatic Refers to a (differentiated) cell of adult origin Sox 2 A key transcription factor involved in maintaining pluripotency and supporting self-renewal and one of the four factors used in reprogramming adult cells into iPS cells Teratomas Tumour-like growths containing each of the main classes of differentiating cells that form when pluripotent cells are injected into various sites in immune deficient mice Totipotent Cells that have the ability to develop into a complete organism Transcription A protein that binds to specific DNA sequences and thereby controls patterns of gene factor expression Trophectoderm The name given to the trophoblast after around 12-15 days Trophoblast Outer layer of cells found in an early embryo that give rise to the placenta and other extraembryonic tissue Unipotent Cells that have the ability to give rise to a single cell type Xeno-free Refers to cell lines that have been isolated/grown without the use of animal-derived products Page 80 POST Report March 2013 Stem Cell Research