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Dissecting Gene Expression Changes Accompanying a Ploidy
Dissecting Gene Expression Changes Accompanying a Ploidy

... changes in gene expression. By altering the copy number of a subset of genes, relative to the rest of the genome, aneuploidy causes a change in the relative expression level of those genes. In the case of Down syndrome, for example, the relative expression of genes on chromosome 21 has been shown to ...
Wk12-DeanApop
Wk12-DeanApop

... Induction of FasL by HBx Is Mediated by Egr-2 and Egr-3 • FasL expression correlates with Egr-3 expression (Fig. 4A), but not with Egr-1 ...
Lab 9: Regulation of lactose metabolism
Lab 9: Regulation of lactose metabolism

... and are all transcribed in the same direction into one mRNA molecule. These three genes transcribed together into a single mRNA constitute an operon. The genes, in order from the promoter region, are: 1) lacZ, 2) lacY, and 3) lacA. The lacZ gene codes for ßgalactosidase, the enzyme that is necessary ...
Loci sarA and/or agr by the Genes Regulated Staphylococcus
Loci sarA and/or agr by the Genes Regulated Staphylococcus

... this list is incomplete and that an expansion of known virulence factors is needed to better understand S. aureus pathogenic processes. In an effort to identify previously unrecognized agrand/or SarA-regulated genes, we performed transcription profiling on RNA samples extracted from wild-type cells ...
Kinoshita, T et al.
Kinoshita, T et al.

... has been reported [34]. This study suggested that a SINE-related sequence, without a tandem repeat structure, is responsible for the imprinted pattern of FWA expression in A. halleri [34]. Thus, in A. halleri at least, the tandem repeat structure, but not the SINE-related sequence, is dispensable fo ...
Dynamic Model of Paclitaxel Biosynthesis Suggests That the Key
Dynamic Model of Paclitaxel Biosynthesis Suggests That the Key

... Paclitaxel, isolated from the bark of several Taxus species, is diterpene alkaloid with remarkable anticancer propertiese specially effective against breast cancer and non-small cell lung cancer [1].The most promising and environmentally friendly way for the sustainable production of paclitaxel is p ...
Computing Co-Expression Relationships
Computing Co-Expression Relationships

... – About 800 genes differentially displayed at least one time point. – Based on array data of 300 ATH1 slides extracted from RMA array data of about 2600 ATH1 slides downloaded from the NASCarrays • Threshold for pearson correlation coefficient = 0.8 ...
Ascidian embryogenesis and the origins of the chordate body plan
Ascidian embryogenesis and the origins of the chordate body plan

Identification of Candidate Genes for Rice Grain Aroma by
Identification of Candidate Genes for Rice Grain Aroma by

Epigenetic chromatin states uniquely define the developmental
Epigenetic chromatin states uniquely define the developmental

... (green) and H3K27me3 (orange) enriched promoters in HSCs, MPPs, PreMegEs, and T cells (left panel). Promoters associated with both H3K4me3 and H3K27me3 (black) were assessed for overlapping peaks (FDR ⱕ 0.05) within a 5-kb region of TSS, and bivalent promoter methylation was defined as presence of c ...
Genome Biology - Institute for Applied Ecology
Genome Biology - Institute for Applied Ecology

... In birds, males are homogametic (ZZ) and females are heterogametic (ZW), in contrast to the mammalian pattern of female XX homogamety and male XY heterogamety. Like the mammalian X and Y chromosomes, the euchromatic Z is large (over 500 genes) and the heterochromatic W small (probably containing ten ...
Gene Prediction - Compgenomics2010
Gene Prediction - Compgenomics2010

... is calculated as P(X|S)=P(x1,x2,…………,xL| b1,b2,…………,bL) ...
B bab +/ab x ab/ab AB/ABABB ab +/ab x ab/Y AB/ABAB ab +/ab ab
B bab +/ab x ab/ab AB/ABABB ab +/ab x ab/Y AB/ABAB ab +/ab ab

... Recombinant type ...
Gene Section
Gene Section

... acids upstream of the start site of EVI1 in the third exon, of which 63 amino acids are derived from the untranslated second exon and from the untranslated part of the third exon of EVI1, and remaining 125 amino acids are from the MDS1 gene. MDS1-EVI1 contains the PR domain that is about 40% homolog ...
Figure 4 - WebmedCentral.com
Figure 4 - WebmedCentral.com

... Timed interactions between the Hox expressing non-organiser mesoderm and the Spemann organiser generate positional information during vertebrate gastrulation. The drawings show simplified 2dimensional representations of Xenopus gastrulae. The first 5 drawings show parasagittal (ventral to dorsal) tw ...
Deletions, Duplications and Inversions ppt
Deletions, Duplications and Inversions ppt

... caused when crossing-over occurs Crossing-over within the inversion can lead to duplication and deletions In the case of paracentric inversions such a cross-over can result in dicentric and acentric chromosomes in ...
TTEST – Between subjects
TTEST – Between subjects

... x-axis could mean a continuum from over-to under-expression (“blue” and “green” genes over-expressed, yellow genes under-expressed) y-axis could mean that “gray” genes are over-expressed in first five expts and under expressed in The remaining expts, while “brown” genes are under-expressed in the fi ...
Structural organization of the malaria mosquito heterochromatin
Structural organization of the malaria mosquito heterochromatin

... portion of the malaria mosquito Anopheles gambiae genome. Methods and Algorithms: Imunostaining of An. gambiae polytene chromosomes was performed using antibodies against Heterochromatin Protein 1 (HP1) and lamin Dm0 Drosophila melanogaster. Physical mapping was done by Cy3, Cy5 labeled PCR amplifie ...


The Zebrafish Model Organism Database
The Zebrafish Model Organism Database

... The Zebrafish Model Organism Database (ZFIN; http: //zfin.org) is the central resource for zebrafish (Danio rerio) genetic, genomic, phenotypic and developmental data. ZFIN curators provide expert manual curation and integration of comprehensive data involving zebrafish genes, mutants, transgenic co ...
Biochemistry
Biochemistry

... affords a unique opportunity for regulating the transcription of certain genes. An additional feature of bacterial mRNAs is that most are polycistronic. This means that multiple polypeptides can be synthesized from a single primary transcript. Polycistronic mRNAs are very rare in eukaryotic cells bu ...
Leukaemia Section t(11;14)(q24;q32) IGH/miR -125b-1 Atlas of Genetics and Cytogenetics
Leukaemia Section t(11;14)(q24;q32) IGH/miR -125b-1 Atlas of Genetics and Cytogenetics

... leukemic recurrence as bilateral ovarian tumors 7 years after allogenic bone marrow transplantation for BCPALL. Chapiro et al. reported two further adult cases: a female patient aged 45 years with an early-pre-B phenotype who died 21 months after diagnostic, and a male patient aged 33 years who were ...
1 Combining Gene Expression with Marker Genotypes in Poultry
1 Combining Gene Expression with Marker Genotypes in Poultry

Salinity stress-tolerant and -sensitive rice (Emphasis Type="Italic
Salinity stress-tolerant and -sensitive rice (Emphasis Type="Italic

... OsAKT K+ -channel homologues are expressed cell-specifically in roots and leaves Here we report the isolation of a rice cDNA, OsAKT1, homologous to inward-rectifying K+ channels, and focus on the analysis of cell specificity of its expression by in situ hybridization. By using a probe from a region ...
The surface-located YopN protein is involved in calcium signal
The surface-located YopN protein is involved in calcium signal

... The low-calcium response (Icr) is strongly conserved among the pathogenic Yersinia species ar»d is observed when the pathogen is grown at 37°C in Ca^ *-depleted medium. This response is characterized by a general metabolic downshift and by a specific induction of virulence-plasmid-encoded yop genes. ...
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Long non-coding RNA

Long non-coding RNAs (long ncRNAs, lncRNA) are non-protein coding transcripts longer than 200 nucleotides. This somewhat arbitrary limit distinguishes long ncRNAs from small regulatory RNAs such as microRNAs (miRNAs), short interfering RNAs (siRNAs), Piwi-interacting RNAs (piRNAs), small nucleolar RNAs (snoRNAs), and other short RNAs.
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