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Loss of Function but No Gain of Function Caused by
Loss of Function but No Gain of Function Caused by

... Homeodomain containing transcription factors of the Hox family play critical roles in patterning the anteroposterior embryonic body axis, as well as in controlling several steps of organogenesis. Several Hox proteins have been shown to cooperate with members of the Pbx family for the recognition and ...
Molecular Testing and Clinical Diagnosis
Molecular Testing and Clinical Diagnosis

... – On glass slides, hybridization can be detected by fluorescence and spot color detection by a microarray scanner. – The silicone chip consists of electrodes, independently addressable via an electronic control system. Hybridization is detected by changes in resistance. ...
PART II Introducció 53
PART II Introducció 53

... citogenètiques a nivell del braç llarg del cromosoma 15 humà. Alteracions d’aquest tipus poden donar lloc al que s’anomenen patologies o transtorns d’origen genòmic (Lupski, 1998b; 2003; Stankiewicz & Lupski, 2002) (Taula 5). És a dir, malalties causades per la pèrdua, guany o disrupció de l’integri ...
Faster-Z Evolution Is Predominantly Due to Genetic Drift Research
Faster-Z Evolution Is Predominantly Due to Genetic Drift Research

... Wu 2005; Torgerson and Singh 2006; Baines and Harr 2007) have shown that X-linked genes exhibit accelerated rates of functional change compared with autosomes. These studies provide a broad consensus for Faster-X Evolution; however, the underlying evolutionary mechanism remains a subject of debate. ...
Proportionality between variances in gene expression induced by
Proportionality between variances in gene expression induced by

... reflects the structural robustness of the phenotype, i.e., the rigidity of the phenotype against changes induced by genetic mutations, whereas the latter reflects the robustness of the phenotype against the stochasticity encountered during the developmental process or that induced by environmental c ...
When epigenetics meets alternative splicing: the roles of DNA
When epigenetics meets alternative splicing: the roles of DNA

... studied for more than 30 years, yet it is far from being fully understood. Accumulating evidence suggests that many splicing events occur cotranscriptionally and that the mRNA precursor remains associated with the chromatin until all of the introns have been removed. Cotranscriptional splicing adds ...
Gene Section ERG (v-ets erythroblastosis virus E26 oncogene like (avian))
Gene Section ERG (v-ets erythroblastosis virus E26 oncogene like (avian))

... ERG-3 is expressed in hematopoietic stem cells and in endothelial cells. In the GNF SymAtlas database, the major ERG expression was found to be in CD34+ cells (that include both hematopoietic stem cells and endothelial cells). ERG was also reported to be expressed in during early T and B cell develo ...
Transgenerational epigenetics in the germline cycle
Transgenerational epigenetics in the germline cycle

Review Article
Review Article

... infection; then they will need to obtain nutrients and to multiply while at the same time evading the host defence mechanisms. In some instances, they may need to invade host cells for survival or further dissemination within the host (Finlay & Falkow, 1989). The recognition that bacterial pathogeni ...
Acquisition of Retinoic Acid Signaling Pathway and
Acquisition of Retinoic Acid Signaling Pathway and

... The neural crest cells give rise to the cranial nerves, cephalic skeletal components and many other tissues comprising the head structure (Gans and Northcutt, 1983). Since most of these and other vertebrate-specific cell types derive from the neural crest cells, their evolution is thought to be an e ...
development, the Linker histone H1 is essential for Drosophila
development, the Linker histone H1 is essential for Drosophila

... However, its elimination by gene inactivation led to partially decondensed chromatin, supporting an in vivo role for H1 in chromatin folding. Mammals express at least eight nonallelic H1 subtypes that differ in their expression during development. Although none of the eight individual subtypes appea ...
Modeling Gene Expression Networks using Fuzzy Logic
Modeling Gene Expression Networks using Fuzzy Logic

... genetic information, into messenger RNA (mRNA) molecules. mRNA molecules are then translated (Here “translate” means that messenger RNA directs the amino acid sequence of a growing polypeptide during protein synthesis) into the proteins that perform most of the critical functions of cells. The analy ...
Chapter 15 - ElderWiki
Chapter 15 - ElderWiki

... •Homologous chromatids may break and rejoin at incorrect places, such that one chromatid will lose more genes than it receives. •A diploid embryo that is homozygous for a large deletion or male with a large deletion to its single X chromosome is usually missing many essential genes and this leads to ...
Echinoderm conundrums: Hox genes, heterochrony, and an excess
Echinoderm conundrums: Hox genes, heterochrony, and an excess

... from the right somatocoel, whose Hox expression indicates a much more caudal origin, to form stalk structures, including at least parts of the chambered organ and possibly ligaments and muscles. The ectodermal component of the cystidean oral region, located at its distal end, and the basal adhesive ...
Polyploidy and genome evolution in plants
Polyploidy and genome evolution in plants

Liu - Blumberg Lab
Liu - Blumberg Lab

... -Expression levels within a cell line - within 1kb of FANTOM enhancer - 5kb of cancer associated SNP site - exon number of lncRNA gene ...
The DNA sequence of human chromosome 21
The DNA sequence of human chromosome 21

... were considered as a hallmark for gene prediction only if these ESTs were spliced into two or more exons in genomic DNA, and showed greater than 95% identity over the matched region. These criteria are conservative and were chosen to discard spurious matches arising from either cDNAs primed from int ...
Similarities and differences of gene expression in yeast stress
Similarities and differences of gene expression in yeast stress

... be an undirected graph whose vertices correspond to genes, and the vertices of two genes are connected by an edge if their expression profiles are sufficiently correlated. Namely, the p-value of the Pearson correlation between the expression patterns of the two genes is statistically significant (p- ...
Deep Insight Section Spatial arrangement of the human genome and its
Deep Insight Section Spatial arrangement of the human genome and its

... al., 2003; Gerlich et al., 2003). Both 3D FISH and live cell approaches have their specific advantages and limitations and it is important to explore both approaches in parallel. For example, the 3D FISH approach is particularly suited to study the topology of a large set of active and inactive gene ...
Plant Molecular Biology
Plant Molecular Biology

... Fig. 1. Construction of plasmids. (A) Inserts containing the nodD genes or only their promoters of various Rhizobium species are indicated together with the used restriction sites. Size and positions of the indicated nod genes are according to published data [31, 30, 8, 34] and data of J. Alan Downi ...
Comparison of genes among cereals
Comparison of genes among cereals

... These gene predictions are based on prediction algorithms. Predicting genes is still an imperfect science [60], and no single gene-prediction algorithm is completely accurate. The annotation of the shotgun sequence of rice japonica that is discussed in this section used several gene-prediction algor ...
A defense-offense multi-layered regulatory switch in a pathogenic
A defense-offense multi-layered regulatory switch in a pathogenic

... starts at the OFF state, when the level of the sRNA regulator is 0 and the TF is expressed and active (A), leading to a high level of protein 1 and a low level of protein 2 (B). Upon change in condition (ON step, at t = 10 h) the sRNA is activated, leading to a decrease in the level of the TF (A) as ...
WNT targets - Stanford University
WNT targets - Stanford University

Mining Phenotypes and Informative Genes from Gene Expression
Mining Phenotypes and Informative Genes from Gene Expression

... inconsistent signals for the samples in a phenotype, and thus cannot be used to distinguish phenotypes. They are called non-informative genes. If phenotype information is known, the major task is to select the informative genes that manifest the phenotypes of samples. This can be achieved by superv ...
Title: Evolution of dosage compensation in Anolis carolinensis, a
Title: Evolution of dosage compensation in Anolis carolinensis, a

... the autosomes because of their unique inheritance patterns (Meisel and Connallon 2013). In species with XX/XY sex determination, females have two copies of the X chromosome, which means that, similar to the autosomes, deleterious recessive genes can be shielded from selection by dominant alleles in ...
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Long non-coding RNA

Long non-coding RNAs (long ncRNAs, lncRNA) are non-protein coding transcripts longer than 200 nucleotides. This somewhat arbitrary limit distinguishes long ncRNAs from small regulatory RNAs such as microRNAs (miRNAs), short interfering RNAs (siRNAs), Piwi-interacting RNAs (piRNAs), small nucleolar RNAs (snoRNAs), and other short RNAs.
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