nitrogen assimilation and global regulation in escherichia coli
... Annu. Rev. Microbiol. 2003.57:155-176. Downloaded from arjournals.annualreviews.org by WIB6332 - University of Saarland on 01/04/10. For personal use only. ...
... Annu. Rev. Microbiol. 2003.57:155-176. Downloaded from arjournals.annualreviews.org by WIB6332 - University of Saarland on 01/04/10. For personal use only. ...
Molecular characterization of MHC class II in a nonmodel anuran
... associations between certain MHC alleles and disease resistance or susceptibility have been found in a number of species (Sommer 2005). Overall, this marker has been found often to be more informative than neutral markers to judge the evolutionary potential of a population (Piertney and Oliver 2006) ...
... associations between certain MHC alleles and disease resistance or susceptibility have been found in a number of species (Sommer 2005). Overall, this marker has been found often to be more informative than neutral markers to judge the evolutionary potential of a population (Piertney and Oliver 2006) ...
XSL Formatter - H:\XML
... sets all contain a group of sequences that spans the same gene or region of the genome. Environmental samples are derived from a group of unclassified or unknown organisms. A population set contains sequences from different isolates of the same organism. A phylogenetic set contains sequences from di ...
... sets all contain a group of sequences that spans the same gene or region of the genome. Environmental samples are derived from a group of unclassified or unknown organisms. A population set contains sequences from different isolates of the same organism. A phylogenetic set contains sequences from di ...
Document
... While for the PAM 1 matrix it holds that a mutational event corresponds to a difference of 1%, this is not true for higher order PAM matrices Indeed, subsequent mutations have a gradually increasing chance to happen in correspondence of already mutated amino acids The degree of difference increases ...
... While for the PAM 1 matrix it holds that a mutational event corresponds to a difference of 1%, this is not true for higher order PAM matrices Indeed, subsequent mutations have a gradually increasing chance to happen in correspondence of already mutated amino acids The degree of difference increases ...
Multiple Alignment
... MSA applies both to nucleotide and amino acid sequences To construct a multiple alignment, one may have to introduce gaps in sequences at positions where there were no gaps in the corresponding pairwise alignment. This means that multiple alignments typically contain more gaps than any given pair of ...
... MSA applies both to nucleotide and amino acid sequences To construct a multiple alignment, one may have to introduce gaps in sequences at positions where there were no gaps in the corresponding pairwise alignment. This means that multiple alignments typically contain more gaps than any given pair of ...
Genomic Insights into Methanotrophy: The Complete Genome Sequence of Methylococcus capsulatus (Bath)
... sequence similarity with the Pyrococcus horikoshii intein. The intein lacks a recognizable endonuclease sequence and appears degenerate compared to the archaeal IF-2 intein, casting doubt on its ability to be mobile. If functional, the presence of the intein in this protein suggests that head morpho ...
... sequence similarity with the Pyrococcus horikoshii intein. The intein lacks a recognizable endonuclease sequence and appears degenerate compared to the archaeal IF-2 intein, casting doubt on its ability to be mobile. If functional, the presence of the intein in this protein suggests that head morpho ...
First genomic insights into members of a candidate bacterial
... the same DNA. Paired-end Nextera libraries were prepared for each sample according to the manufacturer’s instructions, quantified using the QuantIT kit (Molecular Probes) and sequenced (2 × 250 bp paired end) on an Illumina MiSeq using the Reagent Kit v2 (Illumina) at the National Institute of Advan ...
... the same DNA. Paired-end Nextera libraries were prepared for each sample according to the manufacturer’s instructions, quantified using the QuantIT kit (Molecular Probes) and sequenced (2 × 250 bp paired end) on an Illumina MiSeq using the Reagent Kit v2 (Illumina) at the National Institute of Advan ...
PCR Reagents
... TaqNovaHS DNA Polymerase is a mixture of thermostable TaqNova DNA polymerase isolated from Thermus aquaticus and a highly specific monoclonal antibody, which acts as an inhibitor of the polymerization activity. The TaqNovaHS enables easy set up of a hot-start PCR reaction at room temperature. The an ...
... TaqNovaHS DNA Polymerase is a mixture of thermostable TaqNova DNA polymerase isolated from Thermus aquaticus and a highly specific monoclonal antibody, which acts as an inhibitor of the polymerization activity. The TaqNovaHS enables easy set up of a hot-start PCR reaction at room temperature. The an ...
PhD Thesis - Cox Group
... secondary metabolites gene clusters in their respective genomes. This has motivated researchers to express the silent secondary metabolite gene clusters whose chemical ...
... secondary metabolites gene clusters in their respective genomes. This has motivated researchers to express the silent secondary metabolite gene clusters whose chemical ...
MS#5_(Cueno and Laude).indd - Philippine Journal of Science
... of the coconut endosperm and, as seen in Figure 1, visible differences in terms of PCR band intensity were observed, we did expect sequence differences even in the 3’UTR. The major sequence difference between DCT1-5mo and DCT1-6mo transcripts is the 52 nt missing from DCT16mo transcripts (Table 1 an ...
... of the coconut endosperm and, as seen in Figure 1, visible differences in terms of PCR band intensity were observed, we did expect sequence differences even in the 3’UTR. The major sequence difference between DCT1-5mo and DCT1-6mo transcripts is the 52 nt missing from DCT16mo transcripts (Table 1 an ...
Construction of in vivo infectious clones of PRSV P-YK and W-CI
... PRSV W was first described as Watermelon mosaic virus 1 (WMV-1) infecting cucurbits (Webb & Scott, 1965), and considered for a long time as a distinct potyvirus. However, WMV-1 and PRSV isolates are serologically indistinguishable when tested against antibodies prepared to viral particles (Gonsalves ...
... PRSV W was first described as Watermelon mosaic virus 1 (WMV-1) infecting cucurbits (Webb & Scott, 1965), and considered for a long time as a distinct potyvirus. However, WMV-1 and PRSV isolates are serologically indistinguishable when tested against antibodies prepared to viral particles (Gonsalves ...
AN ABSTRACT OF THE THESIS OF Sara R. Fassio for the degree of
... determinants comprise a network of genes called the ToxT regulon, whose expression is modulated by a hierarchy of transcriptional regulators (17). These regulators include the transcription factors AphA and AphB, which positively regulate transcription of the twocomponent regulatory system tcpPH. Th ...
... determinants comprise a network of genes called the ToxT regulon, whose expression is modulated by a hierarchy of transcriptional regulators (17). These regulators include the transcription factors AphA and AphB, which positively regulate transcription of the twocomponent regulatory system tcpPH. Th ...
The endogenous molecular clock orchestrates the temporal
... researchers have shown that the clock mechanism exists in virtually all cell types in the body including skeletal muscle [17,18]. The intrinsic molecular clock is most known for its role in regulating cellular metabolism even under constant lighting or feeding conditions [19-26]. These studies have ...
... researchers have shown that the clock mechanism exists in virtually all cell types in the body including skeletal muscle [17,18]. The intrinsic molecular clock is most known for its role in regulating cellular metabolism even under constant lighting or feeding conditions [19-26]. These studies have ...
Analysis of similarity of the S1 gene in infectious bronchitis virus (IBV
... Coronaviruses have the largest RNA virus genomes and replicate by means of the specific enveloped transcription. Moreover, its mismatching percent and the combination percent is very high, so the virus can mutate easily (Moore et al 1998). Thus the viruses’ antigenicity and pathogenicity are changed ...
... Coronaviruses have the largest RNA virus genomes and replicate by means of the specific enveloped transcription. Moreover, its mismatching percent and the combination percent is very high, so the virus can mutate easily (Moore et al 1998). Thus the viruses’ antigenicity and pathogenicity are changed ...
Characterization of the chimeric seven
... study contained non-polar methionine at position homologous to 105, similar to GPR with leucine at this position but unlike BPR which has polar Gln (Fig. 3), suggesting that they are green-absorbing rhodopsins. Accordingly, the absorption spectra suggest that all CFR isolates from the Ganges River a ...
... study contained non-polar methionine at position homologous to 105, similar to GPR with leucine at this position but unlike BPR which has polar Gln (Fig. 3), suggesting that they are green-absorbing rhodopsins. Accordingly, the absorption spectra suggest that all CFR isolates from the Ganges River a ...
Transcriptome analysis reveals unique C4
... Parietochloris incisa (synonym with M. incisa [11,12]) [13]. Thus, M. incisa may be a potential resource for both ArA and carotenoids exploitation. There are two pathways proposed in microalgae for ArA biosynthesis [14-16]. The understanding of ArA biosynthesis pathway in M. incisa, thus, is first o ...
... Parietochloris incisa (synonym with M. incisa [11,12]) [13]. Thus, M. incisa may be a potential resource for both ArA and carotenoids exploitation. There are two pathways proposed in microalgae for ArA biosynthesis [14-16]. The understanding of ArA biosynthesis pathway in M. incisa, thus, is first o ...
Characterization of sparfloxacin-resistant mutants of Staphylococcus aureus Original article
... (amino acid change from Ser-80 to Tyr), the MIC of the three quinolones was greatly increased (from 1 mg/ml to \32 mg/ml in the case of sparfloxacin). That seems to suggest that a concomitant mutation both in gyrA and grlA is necessary to develop a higher level of resistance to this antibacterial ag ...
... (amino acid change from Ser-80 to Tyr), the MIC of the three quinolones was greatly increased (from 1 mg/ml to \32 mg/ml in the case of sparfloxacin). That seems to suggest that a concomitant mutation both in gyrA and grlA is necessary to develop a higher level of resistance to this antibacterial ag ...
Primers BSHG06 - National Genetics Reference Laboratories
... We have developed a prototype specification for validated primer design and optimisation and have demonstrated its utility in the context of a fully automated sample processing system. We have also implemented an automated optimisation pipeline that will expedite the development of new primer set ...
... We have developed a prototype specification for validated primer design and optimisation and have demonstrated its utility in the context of a fully automated sample processing system. We have also implemented an automated optimisation pipeline that will expedite the development of new primer set ...
Transcriptional Regulation of Metabolism
... gene. Among the set of transcription factors involved, PDX1 (pancreatic duodenum homeobox) is a key component (214) (Fig. 2). PDX1 is the main determinant in the cell lineage of the developing endocrine pancreas and in combination with other transcription factors confers tissue-specific expression o ...
... gene. Among the set of transcription factors involved, PDX1 (pancreatic duodenum homeobox) is a key component (214) (Fig. 2). PDX1 is the main determinant in the cell lineage of the developing endocrine pancreas and in combination with other transcription factors confers tissue-specific expression o ...
Rhizopus Raw-Starch-Degrading Glucoamylase: Its
... glucoamylase gene was not expressed in yeast cells, we have cloned a glucoamylase gene from a CDNAlibrary prepared from Rhizopus mRNA.Sequence analysis of both glucoamylase genes revealed that the genomic gene contained 4 intervening sequences and the CDNAgene lacked 145 nucleotides corresponding to ...
... glucoamylase gene was not expressed in yeast cells, we have cloned a glucoamylase gene from a CDNAlibrary prepared from Rhizopus mRNA.Sequence analysis of both glucoamylase genes revealed that the genomic gene contained 4 intervening sequences and the CDNAgene lacked 145 nucleotides corresponding to ...
Shelef, Katie: A Critical Analysis of Degenerate Primer Design Programs
... T}. The degeneracy of primer P, d(P) = ’ li=1 ÁpiÁ, where l = length of primer P [15]. The need for degeneracy in primer design is partially due to the degeneracy of the genetic code. Because several nucleotide codons can code for the same amino acid, target DNA sequences that have differing codon u ...
... T}. The degeneracy of primer P, d(P) = ’ li=1 ÁpiÁ, where l = length of primer P [15]. The need for degeneracy in primer design is partially due to the degeneracy of the genetic code. Because several nucleotide codons can code for the same amino acid, target DNA sequences that have differing codon u ...
Bio.Seq.Seq
... DNA as A,C,T,G RNA as A,C,U,G DNA include all ambiguous base characters: R,Y,W,S,M,K,H,B,V,D and N RNA including the ambiguous base characters DNA including the non-standard bases B, D, S and W Standard amino acid alphabet Amino acids including rare or nonstandard ones ...
... DNA as A,C,T,G RNA as A,C,U,G DNA include all ambiguous base characters: R,Y,W,S,M,K,H,B,V,D and N RNA including the ambiguous base characters DNA including the non-standard bases B, D, S and W Standard amino acid alphabet Amino acids including rare or nonstandard ones ...
Nucleic acid vaccines against rickettsial diseases and methods of use
... USAID Grant No. LAG-1328-G-00-3030-00. The govern ...
... USAID Grant No. LAG-1328-G-00-3030-00. The govern ...
food produced from glyphosate tolerant sugar beet line 77
... into sugar beet plants by the addition of two new genes. One of these genes encodes the CP4-EPSPS protein, a key enzyme in the biosynthesis of aromatic amino acids in plants and microbes that is not sensitive to applications of glyphosate. The second gene, the gox gene, encodes the glyphosate oxidor ...
... into sugar beet plants by the addition of two new genes. One of these genes encodes the CP4-EPSPS protein, a key enzyme in the biosynthesis of aromatic amino acids in plants and microbes that is not sensitive to applications of glyphosate. The second gene, the gox gene, encodes the glyphosate oxidor ...
food produced from glyphosate
... into sugar beet plants by the addition of two new genes. One of these genes encodes the CP4-EPSPS protein, a key enzyme in the biosynthesis of aromatic amino acids in plants and microbes that is not sensitive to applications of glyphosate. The second gene, the gox gene, encodes the glyphosate oxidor ...
... into sugar beet plants by the addition of two new genes. One of these genes encodes the CP4-EPSPS protein, a key enzyme in the biosynthesis of aromatic amino acids in plants and microbes that is not sensitive to applications of glyphosate. The second gene, the gox gene, encodes the glyphosate oxidor ...
Promoter (genetics)
In genetics, a promoter is a region of DNA that initiates transcription of a particular gene. Promoters are located near the transcription start sites of genes, on the same strand and upstream on the DNA (towards the 5' region of the sense strand).Promoters can be about 100–1000 base pairs long.