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Cent. Eur. J. Chem. • 7(3) • 2009 • 569-575 DOI: 10.2478/s11532-009-0058-3 Central European Journal of Chemistry Synthesis, DNA-binding and antiproliferative activity of N-(Nitrogen heterocyclic) norcantharidin acylamide acid Research Article Wen-Zhong Zhu , Rui-Ding Hu Xiao-Liang Zheng 3 1,2 , Qiu-Yue Lin , Xiao-Xia Wang , 1,2* 1,2 1,2 1 Zhejiang Key Laboratory for Reaction Chemistry on Solid Surfaces, Zhejiang Normal University, Jinhua 321004,China 2 College of Chemical and Life Science, Zhejiang Normal University, Jinhua 321004, China 3 Institute of Matria Medica, Zhejiang Academy of Medical Sciences, Hangzhou 310013, China Received 24 December 2008; Accepted 09 March 2009 Abstract:Two novel norcantharidin acylamide acids (HL1=N-pyrimidine norcantharidin acylamide acid, C12H13N3O4; HL2=N-pyridine norcantharidin acylamide acid, C13H14N2O4) were synthesized by a reaction of norcantharidin(NCTD) with 2-aminopyrimidine and 2-aminopyridine, respectively. Their structures were characterized by elemental analysis, IR, UV and 1 H NMR. Fluorescence titration and viscosity measurements indicated that HL1, HL2 and HL3 (HL3=N-phenyl norcantharidin acylamide acid, C14H15NO4) can bind calf thymus DNA via partial intercalation. The liner Stern–Volmer quenching constant Ksv values for HL1, HL2 and HL3 were 2.05 × 104 L mol-1, 1.15 × 104 L mol-1 and 8.30×103 L mol-1, respectively. Two compounds containing heterocycle of HL1 and HL2 have been found to cleave pBR322 plasmid DNA at physiological pH and temperature. The test of antiproliferation activity showed that the compounds had moderate to strong antiproliferative ability against the tested cell lines except of HL3 against the SMMC7721 cell line. The results indicated that the heterocycle attached to the norcantharidin was favorable to antiproliferative activity. This result was consistent with the DNA binding experiment. Keywords: Norcantharidin • Pyrimidine • Pyridine • DNA binding • Antiproliferative activity © Versita Warsaw and Springer-Verlag Berlin Heidelberg. 1. Introduction Many clinically successful anticancer drugs are themselves either naturally occurring molecules or have been developed from their synthetic analogs. Great interest is currently being focused on developing natural products due to their interesting anticancer activities [1-4]. Cantharidin has been used as a medicinal agent and shown to be active in cervical, leukaemia, bladder and colon cancer cell lines [5-7]. Although cantharidin is cytotoxic to cancer cells and stimulatory on the bone marrow, the renal toxicity of this drug has prevented its use in mainstream oncology. Norcantharidin (Fig. 1a), the demethylated analogue of cantharidin, also possesses anticancer activity and stimulates the bone marrow, but its nephrotoxicity weakens significantly [8]. Many derivatives of norcantharidin have been synthesized and some of them have good anti-tumor activity in vitro [9-10]. To improve the action of drugs with DNA in cell and assess the effect of varying the aromatic ring and hydrophilicity of acylamide on the DNA-binding structure, * E-mail: [email protected] 569 Synthesis, DNA-binding and antiproliferative activity of N-(Nitrogen heterocyclic) norcantharidin acylamide acid Figure 1. Structures of NCTD(a), HL1(b), HL2(c) and HL3(d). two new norcantharidin acylamide acid HL1 (Fig. 1b) and HL2 (Fig. 1c) were synthesized. DNA-binding properties of the compounds were studied by luminescent spectra and viscosity measurement. DNA cleavages of the compounds are also demonstrated. Furthermore, the antiproliferative activities of the compounds toward human hepatoma cells SMMC7721 and human lung cancer cells A549 in vitro were also evaluated with MTT cell viability assay. 2. Experimental Procedures 2.1 Reagents and Instruments Norcantharidin (NCTD, C8H8O4) was obtained from Suzhou Sunray Pharmaceutical Co. 2-aminopyrimidine, 2-aminopyridine and aniline were purchased from Sinopharm Chemical Reagent Co. Aniline and THF (Analytical Reagent) were distilled before use. MTT (3-[4, 5- dimethylthiazol-2-yl]-2, 5-diphenyl tetrazolium bromide) was purchased from the Sigma Company. Calf thymus DNA (ct-DNA, Huamei Co.) was dissolved in 50 mmol L−1 NaCl, 5 mmol L−1 Tris–HCl (pH 7.4). Solutions of ct-DNA gave ratios of UV-vis absorbance of 1.8 at 260 and 280 nm, indicating that the DNA was sufficiently free of protein [11]. Plasmid DNA (pBR322) purchased from Shanghai Biologic Engineering Co. was diluted to 25 μg mL−1. Double-distilled water was used to prepare buffer solutions. Human hepatoblastoma cells (SMMC7721) and human lung cancer cells (A549) were purchased from Shanghai Institute of Cell Bank, Shanghai, China. Elemental analyses of C, H and N were carried out in a Vario EL III elemental analyzer. The melting points of all compounds were determined by the capillary method on a Büchi 510 melting point apparatus and were uncorrected. Infrared spectra were recorded as KBr pellet by using a NEXUS-670 FT-IR spectrometer. Ultraviolet-visible spectra were obtained on a UV-2501PC spectrophotometer. 1H NMR was run on a Brucker Avance 400MHZ NMR spectrometer using trimethylsilyl (TMS) as standard internal reference. The chemical shifts are reported in ppm (δ scale). Fluorescence emission spectra were recorded with a Perkin-Elmer 570 LS-55 spectrofluorometer. Agarose gel electrophoresis was performed on PowerPac Basic electrophoresis apparatus (BIO-RAD). Gel image formation were obtained on UNIVERSAL HOOD 11-S.N. (BIO-RAD Laboratories). Sheldon CO2 culture box and East-China Electronic tube Factory DG3022A ELISA instruments were used to perform antiproliferative activity. 2.2 Preparation of the N-pyrimidine norcantharidin acylamide acid (HL1=(1S,4R)-3(pyrimidine-2-ylcarbamoyl)-7-oxa-bicyclo [2.2.1] heptane-2-carboxylc acid) 30 mL THF solution containing 2-aminopyrimidine (2.36 g, 25 mmol) was added dropwise to another THF solution containing norcantharidin (4.12 g, 25 mmol). The mixture was stirred for 10 hours at room temperature and a white precipitate was formed. The precipitate was filtered and washed with acetonitrile. Then the compound was recrystallized from 95% ethanol, and dried for 2 hours in a vacuum. Yield 88%, mp: 104-106oC. Anal. Calcd. for HL1 (C12H13N3O4): C, 54.75; H, 4.98; N, 15.96. Found: C, 54.23; H, 5.26; N, 15.38. IR (KBr pellet, cm-1): ν(N-H) 3339(s); ν(C=O) (COOH) 1703(s); ν(C=O) (CONH) 1669(s); ν(pyrimidine, C=N) 1627(s); ν(C-O-C) 1170(m). UV-Vis: 293.5 nm, 220.5 nm. 1 H NMR (DMSO-d6), δ (ppm): 6.52-6.56(m, 3H, ArH); 4.66-4.67(m, 2H, C1C4-H); 2.90(d, 2H, C2C3-H); 1.48-1.56(m, 4H, C5C6-H). 2.3 Preparation of the N-pyridine norcantharidin acylamide acid (HL2 =(1S,4R)-3-(pyridine2-ylcarbamoyl)-7-oxa-bicyclo [2.2.1] heptane-2-carboxylic acid) HL2 was prepared in a manner similar to that of HL1 except for 2-aminopyridine instead of 2-aminopyrimidine. Yield 92%, mp: 147-148 oC. Anal. Calcd. for HL2 (C13H14N2O4): C, 59.54; H, 5.38; N, 10.68. Found: C, 59.60; H, 5.43; N, 9.90. IR (KBr pellet, cm-1): ν(N-H) 3316 (s); ν(C=O) (COOH) 1714(s); ν(C=O) (CONH) 1662(s); ν(pyridine, C=N) 1622(s); ν(C-O-C) 1172(m). UV-Vis: 299.4 nm, 229.6 nm. 1H NMR (DMSO-d6), δ (ppm): 6.42-7.88 (m, 4H, Ar-H), 4.64-4.65(m, 2H, C1C4-H), 2.90(d, 2H, C2C3-H), 1.47-1.55(m, 4H, C5C6-H). W-Z. Zhu et al. 2.4 Preparation of the N-phenyl norcantharidin acylamide acid (HL3= (1S,4R)-3-Phenyl carbamoyl-7-oxabicyclo [2.2.1] heptane2-carboxylic acid) HL3 was prepared by using a method that is similar to that found in literature [12]. Anal. Calcd. for HL3 (C14H15NO4): C, 64.36;H, 5.78; N, 5.36. Found: C, 64.77; H, 5.98; N, 5.09. IR (KBr pellet, cm-1): ν(N-H) 3302 (s); ν(C=O) (COOH) 1720(s); ν(C=O) (CONH) 1681(s); ν(benzene) 1601(s); ν(C-O-C) 1170(m). UV-Vis: 240.8 nm. 1H NMR(DMSO-d6), δ(ppm): 11.96(s, 1H, COOH); 9.65(s, 1H, NH); 6.99-7.53 (m, 5H, Ar-H); 4.62-4.79(m, 2H, C1C4-H), 2.90(d, 2H, C2C3-H), 1.49-1.61(m, 4H, C5C6-H). 2.5 DNA binding and cleavage experiments Fluorescence quenching experiments were carried out by adding different concentrations (0 - 108 μmol L-1) ct-DNA solution (3.74 × 10-4 mol L-1) to the samples containing 40 μmol L-1 compounds solution and TrisHCl buffer (PH 7.4). After incubation for 4 hours at 4°C, fluorescence measurements were excited at 280 nm and emission was observed between 300 and 500 nm. Viscosity experiments were conducted on an Ubbelohde viscometer, immersed in a thermostatic water-bath maintained to 30°C. Each compound was introduced into a DNA solution (3.74 × 10-4 mol L-1) by microsyringe. The average values of three replicated measurements were used to evaluate the viscosity of the samples. Data is represented as (η/η0)1/3 vs. the ratio of the concentration of the compound to DNA, where η and η0 are the viscosity of DNA in the presence and absence of compounds, respectively. Viscosity was calculated from the observed flow time of DNA solution in the presence of compounds (t), corrected from the flow time of buffer alone (t0), η=(t- t0) / t0. The compounds were incubated with the pBR322 plasmid DNA in order to understand whether any interaction occurred. The incubation time lasted for 3 h at 37°C until 0.25% bromophenol blue and 1 mmol L-1 EDTA were added. The DNA cleavage products were subjected to electrophoresis on 1.0% agarose gel containing 0.5 μg mL-1 ethidium bromides. The gels were run at 110 V for 1.2 h in Tris-borate - ethylenediaminetetraacetic acid (TBE) buffer and the bands were photographed. 2.6 Antiproliferative activity evaluation Growth of cells in the exponential phase were assayed in 96-well plates by adding 100 μL stock solution directly to culture wells. After the cells were seeded for 24 h, the HL and NCTD were added. Then the cells were incubated for 72 h, followed by adding 100 μL MTT (1 mg mL-1, dissolved in DMEM nutrient solution) into each well for 4 h at 37°C. Later, the liquid in each well was discarded and then 150 μL acidifying isopropanol (containing 0.04 mol L-1 HCl) was added. The mixture was placed in the dark for 30 min. The inhibition rate and IC50 were calculated [13]. 3. Results and Discussion 3.1 Characterization of HL1 and HL2 The acylamide acids were prepared by direct reaction of norcantharidin with appropriate mole ratios of 2-aminopyrimidine, 2-aminopyridine and aniline in THF. The yields were good. The desired compounds were separated from solution by suction filtration and purified by recrystallization with ethanol. The compounds have been visibly characterized through UV-vis and IR spectral analysis. The main UV-Vis absorption spectra of the compounds at 220.5 nm (HL1) and 229.6 nm (HL2) are ascribed to the 1La(π-π*) transition of the pyrimidine and pyridine. The bands at 293.5 nm (HL1) and 299.4 nm (HL2) are ascribed to the 1Lb (π-π*) transition of the pyrimidine and pyridine [14], respectively. IR absorption spectra of the compounds have been tested. The bands at 3339 cm -1 and 3316 cm-1 are assigned to the N-H stretching vibration of HL1 and HL2, respectively. The amide I band consists mainly of ν(C=O), and the amide II and III bands arise from δ(N-H) as well as from ν(C-N), although these modes are coupled to one another [15]. So the bands at 1669 cm-1 (HL1) and 1662 cm-1 (HL2) are the amide I band that consist of ν(C=O), and the bands at 1541 cm-1 (HL1), 1540 cm-1(HL2) are amide II bands that arise from δ(N-H). Meanwhile, at the 1243 ~ 1245 cm-1 bands of amide III from ν(C-N) are observed. The bands at 1703 cm-1 and 1714 cm-1 belong to the ν(C=O) in carboxyl of HL1 and HL2, respectively. The compounds exhibits one sharp band at 1627 cm-1(HL1) and 1622 cm-1(HL2) due to ν(C=N) of heterocyclic stretching vibration. 3.2.DNA binding and cleavage studies 3.2.1 Fluorescence spectral studies The interaction mechanism of compounds molecules with DNA can be studied by fluorescence spectra. When the compounds combine with DNA, their emission spectra and lifetime of excited state will change. The change of the fluorescence spectra will indicate that the compounds combined with DNA in a certain form. It is reported that if the emission of the compounds decreases obviously with the amount of DNA increasing, 571 Synthesis, DNA-binding and antiproliferative activity of N-(Nitrogen heterocyclic) norcantharidin acylamide acid Figure 2. Fluorescence spectra of the combination HL1(a), HL2(b) and HL3(c) in the absence and presence of increasing amounts DNA, λex = 280 nm, λem = 300 – 500 nm. Arrows show the intensity changes upon increasing concentration of the DNA. For(a) [HL1]=40 μmol L-1, [DNA]/10-5 mol L-1: (1): 0; (2): 1.8; (3): 3.6; (4): 5.4; (5): 7.2; (6): 9.0; (7): 10.8. For(b) [HL2]=40 μmol L-1 , [DNA]/10-5 mol L-1: (1): 0; (2): 1.8; (3): 3.6; (4): 5.4; (5): 7.2; (6): 9.0; (7):10.8. For(c) [HL3]=40 μmol L-1, [DNA]/10-5 mol L-1: (1): 0; (2): 1.8; (3): 3.6; (4): 5.4; (5): 7.2; (6): 9.0; (7):10.8. the compounds interact with DNA by intercalation fully [16] or partially [17]. The reduction in emission intensity of HL with increasing ct-DNA concentration is shown in Fig. 2. In the absence of DNA, HL1, HL2 and HL3 emit intense luminescence in Tris-HCl buffer at ambient temperature, with a maximum appearing at 362 nm (HL1) Fig. 2a, 355 nm (HL2) Fig. 2b and 348 nm (HL3) Fig. 2c, respectively. When DNA is present the intensity of the emission for HL1, HL2 and HL3 all decrease. This phenomenon of the luminescence property of compounds in presence of DNA strongly supports that the compounds bind to double-stranded DNA by intercalation. The stacking of the compound with the base pairs of DNA leads to transfer of electron and energy from the aromatic ring of compound to the base pairs [18] and the nitrogen atoms of aromatic ring in HL1 and HL2 play a beneficial role in the accumulation. This maybe relative to the hydrogen bonds formed between nitrogen atoms of heterocycle and base pairs of the DNA. As a result, HL1 containing pyrimidine can stack with base pairs of DNA more easily than HL2 containing pyridine. According to the Stern–Volmer equation [19]: I0/I = 1+ Ksv [Q], where I0 and I represent the fluorescence 572 intensities in the absence and presence of the DNA, respectively. [Q] is the concentration of DNA. The Ksv values for HL1, HL2 and HL3 are 2.05 × 104 L mol-1, 1.15 × 104 L mol-1 and 8.30 × 103 L mol-1, respectively. It can be found that the luminescence reduce of HL1 was more obviously than that of HL2 and HL3. 3.2.2 Viscosity study To further confirm the interaction mode of the compounds with DNA, a comparative viscosity study between the NCTD and the HL were carried out (Fig. 3). Hydrodynamic measurements which are sensitive to length increase (for example, viscosity, sedimentation) are regarded as the least ambiguous and the most critical tests of binding mode in solution in the absence of crystallographic structure data or NMR [20]. A classical intercalative mode thinks that significant increase in viscosity of DNA solution is due to increase in lengthening the DNA helix, as base pairs are separated to accommodate the binding compound. However, a partial and/or nonclassical intercalation of compounds may bend (or kink) the DNA helix, resulting in the decrease of its effective length and, concomitantly, its viscosity [21]. As shown in Fig. 3, the W-Z. Zhu et al. (η/η0)1/3 effects of HL and NCTD on the viscosity of ct-DNA at 30.0oC were investigated. It is found that the presence of NCTD has no obvious effect on the relative viscosity of DNA, whereas the HL decreases the relative viscosity of DNA. The NCTD can not insert the DNA double helix, because of the rigid non-planarity of the six-membered ring and the hindering effect of ether oxygen atom in NCTD. HL molecule which contained planer aromatic ring could insert into DNA base pairs. The reduced degree of DNA viscosity for HL1 is stronger than that for HL2 and HL3. This result demonstrates that the increased number of nitrogen atoms of heterocycle could form more hydrogen bonds with base pairs of DNA, which facilitates intercalation of compounds to DNA. Fluorescent titration experiment and viscosity measurement suggest that the compounds may bind to DNA by partial intercalation. The binding ability with DNA decreased in following order: HL1, HL2, and HL3. 3.2.3 Gel eletrophoresis studies The cleavage reaction on plasmid DNA can be monitored by agarose gel electrophoresis. When circular plasmid DNA is subjected to electrophoresis, relatively fast migrations will be observed for the intact supercoil form (Form I). If scission occurs on one strand (nicking), the supercoil will partial relax to generate a slower-moving open circular form (Form II) [22]. The ability of NCTD and HL in effecting DNA cleavage has been investigated by gel electrophoresis using supercoiled pBR322 DNA (Fig. 4 and Table 1). Initially, in the untreated pBR322 plasmid DNA (lane 1) does not show apparent cleavage of DNA. The cleavage efficiency of HL1 (Fig. 4a, lane 4) and HL2 (Fig. 4b, lane 4) can cleave 68% and 43% the supercoiled plasmid DNA (Form I) to partial nicked circular DNA (Form II at 400 μM, respectively. In contrast to HL1 and HL2, NCTD and HL3 (Table 1) cannot cleave the supercoiled plasmid DNA. And the observed DNA cleavage activity of HL1 and HL2 are believed to form monofunctional adducts with Guanine. The monofunctional adducts could close to form initially bifunctional interstrand GC adducts that can evolve into interstrand GG adducts. When bifunctional interstrand adducts is formed, planar compounds containing nitrogen heterocycle, HL1 and HL2 will be positioned along the helix axis so that they will push apart adjacent base pairs [23]. All these results are well consistent with spectroscopic and viscosity measurement. 3.3 Antiproliferative activity evaluation r(CCompound/CDNA) Figure 3. Effect of increasing amounts of compounds on the relative viscosities of ct-DNA at 30oC. [DNA] = 3.72 × 10-4 mol L-1, r = [compound]/[DNA]. (1): r = 0; (2): r = 0.09; (3): r = 0.18; (4): r = 0.27; (5): r = 0.36; (6): r = 0.45; (7): r = 0.54; (8): r = 0.63, respectively. The antiproliferative activity of HL and NCTD against two kinds of tumor cells (human hepatoma cells SMMC7721 and human lung cancer cells A549) were studied, the results of which are listed in Fig. 5. From the figure, the average inhibitory ratio against SMMC7721 (Fig. 5a) and A549 (Fig. 5b) cancer cell lines increases with the Figure 4. Electrophoretic separation of pBR322 DNA induced by HL1(a) and HL2(b), [DNA] = 3 µg mL-1. lane 1: DNA alone; lane 2: DNA+compound (100 µM); lane 3: DNA+compound (200 µM), lane 4: DNA+ compound (400 µM). 573 Synthesis, DNA-binding and antiproliferative activity of N-(Nitrogen heterocyclic) norcantharidin acylamide acid Table 1. Comparison of the pBR322 DNA cleavage efficiency at different concentrations of NCTD and HL. Compounds Form / % DNA control NCTD HL 1 HL2 HL 3 Figure 5. DNA + Compound (100 µM) DNA + Compound (200 µM) DNA + Compound (400 µM) 77 I 81 80 80 II 19 20 20 23 I 81 71 75 32 II 19 29 25 68 I 81 76 67 57 II 19 24 33 43 I 81 78 74 68 II 19 22 26 32 Effect of the NCTD and compounds at different concentrations for 72 hours on the proliferation of tumor cell. All assays were performed in triplicate for three independent experiments. (a): SMMC7721; (b): A549. Data are expressed as mean±S.D. (n = 3). Table 2. 72 h IC50 (μM) values of test compounds in SMMC7721 and A549 cells lines. Data represent mean±S.D. All assays were performed in triplicate for three independent experiments. Compounds a IC50 (μM)a NCTD HL HL2 HL3 SMMC7721 115.5 ± 9.5 84.2 ± 4.1 111.0 ± 5.7 > 200 A549 88.7 ± 12.8 126.8 ± 9.4 190.0 ± 9.3 163.6 ± 33.4 1 IC50 (μM) was given as the concentration at 50% inhibition of cell growth. increasing of the concentration of HL. Generally, the anti-proliferative activities of HL against the SMMC7721 cell lines are stronger than toward A549. The order of anti-proliferative activity against the tumor cell lines in the range of tested concentration (25 – 200 μM) is: HL1>HL2>HL3. As shown in Fig. 5a, at higher dose (200 μM), the inhibition rates of HL1 (88.3 ± 3.1%) and HL2 (85.4 ± 1.2%) are much higher than that of NCTD (66.1 ± 3.2%) against SMMC7721 cell lines, respectively. In the range of tested concentration, HL3 almost showed no anti-proliferative activity against the SMMC7721 cell lines, whereas as the dose is increased, HL3 have obvious inhibition against A549. The concentration of the compounds for 50% inhibition (IC50) on the SMMC7721 and A549 cell lines were determined and the results were listed in Table 2. As shown in Table 2, IC50 of the HL1 and HL2 were lower (84.2 ± 4.1 μM and 111.0 ± 5.7 μM, respectively) compared with NCTD (115.5 ± 9.5 μM) for 574 the SMMC7721 cell lines. The results indicated that the nitrogen-heterocycle attached to the norcantharidin is favorable for antiproliferative activity. It is consistent with the results of the DNA binding experiment. Therefore, we think that it is more likely that the molecular target contributing to this antiproliferative activity of this compound is not only the proteins [24], but also DNA. 4. Conclusions Two novel norcantharidin acylamide acids of nitrogenheterocycle were synthesized and characterized. The HL can bind to DNA by partial intercalation binding modes. The compounds of HL1 and HL2 have been found that they not only bind to ct-DNA but also cleave pBR 322 DNA at physiological pH and temperature. The results showed that HL1 and HL2 have stronger anti-proliferative activity to SMMC7721 cells than to A549 W-Z. Zhu et al. cells. The inhibition activity of HL1 (IC50 = 84.2 ± 4.1 μM) are much higher than that of NCTD (IC50 = 115.5 ± 9.5 μM) against SMMC7721 cell lines. So HL1 seems to be well suited for further work aiming at the development of new anticancer agents. These observations suggested that the structure of side chains attached to NCTD plays an important role in the binding extent with DNA and in the anti-proliferative effect against cancer cells. However, further studies are necessary. 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