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168 Recent Patents on Anti-Cancer Drug Discovery, 2012, 7, 168-184 Targeting Acetyl-CoA Carboxylases: Small Molecular Inhibitors and their Therapeutic Potential Di-Xian Luo1,2, Di-Jun Tong3, Sandeep Rajput2, Chun Wang4,5, Duan-Fang Liao4,5, Deliang Cao2 and Edmund Maser6,* 1 Institute of Translational Medicine & Department of Laboratory Medicine, The First People's Hospital of Chenzhou, 102 Luojiajing Road, Chenzhou 423000, Hunan, P.R. China; 2Department of Microbiology, Immunology and Cell Biology, Simmons Cancer Institute, Southern Illinois University School of Medicine. 913 N. Rutledge Street, Springfield, IL 62794, USA; 3Department of Cardiovascular Medicine, Central Hospital of Yiyang, Yiyang 41300, P.R. China; 4 Institute of Pharmacy and Pharmacology, College of Pharmaceutics and Life Science, University of South China, Hengyang 421001, P.R. China; 5Department of Traditional Chinese Diagnotics, School of Pharmacy, Hunan University of Chinese Medicine, Changsha 420108, P.R. China; 6Institute of Toxicology and Pharmacology for Natural Scientists, University Medical School Schleswig-Holstein, Campus Kiel. Brunswiker Str. 10 24105, Kiel, Germany Received: November 1, 2011; Accepted: January 12, 2012; Revised: February 12, 2012 Abstract: Acetyl-CoA carboxylases (ACCs) play a rate-limiting role in fatty acid biosynthesis in plants, microbes, mammals and humans. ACCs have the activity of both biotin carboxylase (BC) and carboxyltransferase (CT), catalyzing carboxylation of Acetyl-CoA to malonyl-CoA. In the past years, ACCs have been used as targets for herbicides in agriculture and for drug discovery and development of human diseases, such as microbial infections, diabetes, obesity and cancer. A great number of small molecule ACC inhibitors have been developed, including natural and non-natural (artificial) products. These chemicals target BC reaction, CT reaction or ACC phosphorylation. This article provides a comprehensive review and updates of ACC inhibitors, with a focus on their therapeutic application in metabolic syndromes and malignant diseases. The patent status of common ACC inhibitors is discussed. Keywords: Acetyl-CoA carboxylases, cancer, fatty acid synthesis, inhibitors, metabolic syndromes, obesity. 1. INTRODUCTION Obesity, a worldwide epidemic, not only impacts life quality, but also leads to a variety of co-morbidities, such as diabetes, hypertension, dyslipidemia, coronary heart disease, stroke, atherosclerosis, and cancer, accelerating obesityrelated morbidity and mortality [1-6]. It is needed to develop effective therapeutics of obesity and the ensuring comorbidities. Acetyl-CoA carboxylases (ACCs) are ratelimiting enzymes in fatty acid de novo biosynthesis, catalyzing ATP-dependent carboxylation of acetyl-CoA to malonylCoA [7-9]. This reaction continuously proceeds in two steps in participation of biotin prosthetic group, i.e., an ATPdependent biotin carboxylation and an ATP-independent transfer of the carboxyl group Fig. (1) [10]. In humans and other mammals, there are two ACCs: ACC1 (also called ACC-) with 265kDa and ACC2 (also known as ACC-) with 280kDa. ACC1 and ACC2 are encoded by different genes, but share 75% amino acid sequence similarity except for extra 114 amino acids in the Nterminus of ACC2, in which the first 20 amino acid residues constitute a signal peptide targeting mitochondrial membrane [11]. Thereby, these two ACCs have distinct subcellular *Address correspondence to this author at the Institute of Toxicology and Pharmacology for Natural Scientists, University Medical School SchleswigHolstein, Campus Kiel. Brunswiker Str. 10 24105, Kiel, Germany; Tel: 0431-597-3540; Fax: 0431-597-3558; E-mail: [email protected] -9/12 $100.00+.00 distribution and function although they both catalyze the production of malonyl-CoA Fig. (1) [10]. ACC1 is expressed mostly in lipogenic tissues (the liver, adipose and lactating mammary gland) and catalyzes the rate-limiting reaction in the biosynthesis of long-chain fatty acids in cytosol. The product malonyl-CoA is used for the elongation of acyl chains by fatty acid synthase (FAS) [12-15]. In contrast, ACC2 is expressed mainly in the liver, skeletal muscle and heart with high energy metabolic activity, where its product malonyl-CoA participates in the regulation of fatty acid oxidation by inhibiting carnitine palmitoyltransferase I (CPT-I) that catalyzes the transition of long-chain acyl-CoA across mitochondrial membranes [16]. Therefore, malonylCoA is a dual functional metabolite involved in both fatty acid synthesis and oxidation, and ACC1/2 isozyme-nonselective inhibitors may selectively reduce fatty acid synthesis in lipogenic tissues and increase fatty acid oxidation in energy production organs [17, 18]. In view of the importance of ACCs in fatty acid synthesis and oxidation, the investigation of ACC inhibitors have been attracting the interest of researchers and many promising inhibitors have been developed and used in preclinical and clinical studies for the treatment of obesity and metabolic syndromes or in the management of malignancies [19]. This article reviews the recent updates of ACC inhibitor exploitation and their patent situations. © 2012 Bentham Science Publishers Acetyl-CoA Carboxylase Inhibitors Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 169 O O O O HN S O N C C O se Biotin Carboxyl Carrier protein se era rase nsf oxyla NH ansfe ytra O S oxytr Biotin translocation O N Bioti n Ca rb Carb box Biotin Carboxyl Carrier protein B io ti n C ar b o xy la se Car NH HN C H2 S Malonyl-CoA CoA O C S xytran C Carbo O O NH sferas e Biotin Carboxyl Carrier protein HO HN Acetyl-CoA ADP + Pi C N CoA O O O S B io ti n C ar b o xy la se C H3 O O C ATP Fig. (1). ACC work mode. ACC has three functional domains and its catalyzation reaction occurs in two steps. The initial reaction is an ATP-dependent transfer of CO2 from HCO3- to a nitrogen atom of the biotin prosthetic group of ACCs, and the 2nd step is an transfer of the activated CO2 from biotin to acetyl-CoA, forming malonyl-CoA [10]. 2. STRUCTURE OF ACETYL-COA CARBOXYLASES ACCs are conserved in their amino acid sequence and function in most living organisms, such as archaea (~34% similarity in amino acid sequence), bacteria (~34% similarity), yeast (~56% similarity), plants (~54% similarity), rodents (~98% similarity), and mammals (~98% similarity), compared to humans. However, genes encoding ACCs are varied Fig. (2A). In mammals and most eukaryotic organisms, ACCs are a multiple domain polypeptide composed of biotin carboxylase (BC), biotin carboxyl carrier (BCCP), and carboxyltransferase (CT) domains that are encoded by a single gene. ACCs from Streptomyces coelicolor (S. coelicolor) comprise subunit containing BC and BCCP domains and subunit (CT domain), encoded by an accA1(A2) and pccB gene, respectively [20-22]. ACC in Archaeal Acidianus brierleyi consists of 3 subunits encoded by accC, accB, and pccB gene, respectively [23]. In Escherichia coli (E. coli), carboxyltransferase of ACCs consists of subunit and subunit encoded by accA and accD, respectively [24]. Therefore, in many low grade organisms, ACC is an unstable multi-submit enzyme comprised of BC, BCCP and CT subunits. BC domain/subunit catalyzes carboxylation of N1 atom in ureido ring of biotin covalently linked to a lysine residue in BCCP with bicarbonate as a donor of carboxyl group and ATP as an energy source. CT domain/subunit catalyzes the transfer of the carboxyl group from the N1 atom to the methyl group of acetyl-CoA [17]. Significant sequence homology exist between the BC subunit and eukaryotic BC domain, but the conservation of the CT compo- nent is much lower [25]. An exception appears in plants where ACCs exist as a multi-functional single protein (MFACC) and a multi-subunit heteromeric complex (MS-ACC) Fig. (2B) [26, 27]. 2.1. BC Domain of acetyl-CoA Carboxylases Crystal structure shows that yeast BC domain consists of 20 -strands (1-20) and 21 -helices (A–U), forming three sub-domains (A, B, and C) and an ATP-grasp fold [2831] Fig. (3A). The A-domain (residues 1-175) consists of helices A-G and strands 1-5; B-domain (residues 234293) holds helices K and L and strands 9-11; and Cdomain (residues 294-566) is composed of anti-parallel sheet (12-20) flanked with helices M-U. Residues 176233) comprise an AB linker (helices H-J and 6-8). A-, C-domains and AB-linker form a cylindrical structure with ATP located at one end and B-domain acts as a lid at another end Fig. (3B). ATP binding site, i.e., the active site of enzyme is located at the interface of the B-domain and cylinder [30]. The B-domain keeps open conformation to the entry of substrate or the release of product, but is closed during the catalytic process. 2.2. CT Domain of Acetyl-CoA Carboxylases Crystal structures of human ACC CT domain in complex with CP-640186 and bovine CT domain in complex with novel inhibitors have been identified [32, 33]. Yeast CT domain dimer was also identified as a free enzyme or in complexes with CoA [25], herbicides haloxyfop/diclofop [34], or 170 Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 A BC Mammalian/Wheat/Yeast Luo et al. a subunit S. coelicolor Encoding gene: BC Encoding gene: accC MF-ACC b subunit accA1 (A2) BC Acidianus brierleyi CT BCCP BCCP BCCP accB CT MF/MS-ACC CT MS-ACC pccB pccB CT BC E. coli Encoding gene: B accC Gramineae MF-ACC Plastid MF-ACC BCCP accB MS-ACC accA accD Dicot MF-ACC Plastid MS-ACC Fig. (2). ACC function domain. (A) ACC protein domains and encoding genes. ACCs of mammalian, wheat and yeast are composed of BC, BCCP, and CT domains encoded by a single gene. ACC from S. coelicolor consists of subunit consisting of BC and BCCP domains and subunit, encoded by an accA1 (A2) and pccB gene, respectively. ACC form Acidianus brierleyi consists of 3 subunits encoded by an accC, accB, and pccB gene, respectively. In E. coli, carboxyltransferase of ACCs consists of subunit and subunit encoded by accA and accD gene. (B) ACC forms in plant, a multi-functional single protein (MF-ACC) and a multi-subunit heteromeric complex (MS-ACC). an inhibitor CP-640186 [35]. This yeast CT domain dimer is formed by a side-to-side reverse arrangement of two monomers [36]. A yeast CT domain monomer comprises 24 helices and 29 -strands, constructing two sub-domains (Nand C-domains) intimately associated with each other Fig. (3C). The N-domain consists of residues 1484-1824 (strands 1-13 and helices 1-8), and the C-domain is composed of residues 1825-2202 (1-12 and helices 1-8). The N- and C-domains share similar polypeptide backbone folds with a central -- superhelix (strands 5, 7, 9, and 11 and helix 6). Catalytic pocket/cavity is formed by small sheets and 6 helix of -- superhelix of two domains, featured with additional binding surface for CoA Fig. (3C and 3D). The active site is located at the middle site of the interface of N- and C-domains in the dimer. Conserved residues in the active site, Arg 1954 and Arg 1731 in particular, are important for carboxyl group recognition of malonyl-CoA, and the N1 atom of biotin itself functions as a general base [25]. 2.3. BCCP Subunit/Domain of Acetyl-CoA Carboxylases BCCP subunit in E. coli contains the essential biotin covalently bound to lys 35 from the C-terminus, and the integral BCCP has strong tendency to aggregate [37, 38]. The molar ratio of BC to BCCP subunits in E. coli is 1:2 [39]. The N-terminus (residues 1-30) of BCCP is responsible for the interaction with BC, and the BC·BCCP complex could be biotinylated in vitro. 3. REGULATION OF ACETYL-COA CARBOXYLASE ACTIVITY Due to the importance in energy and lipid metabolism, ACCs activity is regulated at multiple levels, including transcriptional, posttranslational, and metabolite-allosteric regulations. Transcription of ACC1/2 genes is controlled by sterol-regulatory-element binding protein 1 (SREBP-1), liver X receptor, retinoid X receptor, peroxisome-proliferationactivated receptors (PPARs), forkhead box O (FOXO), C/EBP and PPAR co-activator (PGC) [40-44]. By stimulating these signalings, a variety of factors and hormones, such as glucose, insulin, and thyroid hormones regulate ACC expression. Please refer to the recent review articles for more details [45-52]. Posttranslational regulation of ACC activity includes phosphorylation and stabilization [53]. ACCs are phosphorylated as inactive monomers. On the contrary, dephosphorylation activates ACCs that self-associates for a functional multimeric filamentous complex. Induced polymerization of mammalian acetyl-CoA carboxylase by MIG12 provides a tertiary level of regulation of fatty acid synthesis [54]. AMPactivated kinase (AMPK), regulated by a variety of stress signals and adipokines, (e.g. leptin and adiponectin), mediates the phosphorylation of ACC at Ser 79, Ser 1200, and Ser 1215 [45, 55-57], and protein kinase A (PKA) activated by low blood glucose phosphorylates ACCs at Ser 77, and Ser 1200 [42, 58]. Additionally, breast cancer protein 1 Acetyl-CoA Carboxylase Inhibitors Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 A B B-Domain C-Domain C b11 b6 ATP aR B-Domain aK b9 aT aS b15 b16 b17 b14 b12 aI b13 b19 Sor aN b18 aM b20 aD aE C AB linker linker aG b1 aP b 3 b 2 aF b 4 b5 aO A-Domain ATP aJ b8 b7 AB aH aC B-Domain aL b10 aU aQ C-Domain Sor aA aB N N D C N Domain CoA N Mol2 C domain C Domain b7D A-Domain Mol1 b7C N domain b7A b7B a3A 171 a6C a6 a 6B CoA a4 a6A a5 a3 b11 b 9 a7 b6 b10 b 8 b12 a8 b13 b4 b3 a1 b2 a6 a6D a7 b 10 a8A N a2 b8 b6 b 4A a3 b4 b3 a2 a8 a8B C b 4B a4 b9 b 11 b 12 b1 a5 N a8C b1 N A C-Domain N Domain C Fig. (3). 3D structure of ACC domains. A and B: Crystal structure of BC domain of yeast ACC 1. C and D: Crystal structure of CT domain of ACC 2. The crystal structure figures were produced with permission as indicated in footnote. (BRCA1) prevents ACCs from dephosphorylation at Ser 79 and Ser 1263 [59, 60]. Recent studies from our laboratory have revealed a novel regulatory mechanism on ACC activity. Aldo-keto reductase family 1 member B10 (AKR1B10), a NADPH-dependent xenobiotic reductase primarily expressed in the colon and small intestine [61-63], upregulated simultaneously with ACC1 in tumorigenic transformation of human mammary epithelial cells. Through direct association with ACC1, AKR1B10 blocks its ubiquitin-dependent degradation, mediating fatty acid synthesis and lipid metabolism [64, 65]. ACC activity is also regulated in molecular conformation by local metabolites. Citrate, a precursor of acetyl-CoA, allosterically activates ACCs, stimulating conversion of excessive acetyl-CoA to malony-CoA [66]. In contrast, palmitoylCoA, an end-product of fatty acid synthesis, promotes the inactive conformation of ACCs, diminishing malonyl-CoA production [67]. 1 Reprinted from Molecular Cell, Vol. 16, Shen Y, Volrath SL, Weatherly SC, Elich TD, Tong L, A mechanism for the potent inhibition of eukaryotic acetyl-coenzyme A carboxylase by soraphen A, a macrocyclic polyketide natural product, 881-91., Copyright (2004) , with permission from Elsevier. 2 , From Zhang H, Yang Z, Shen Y, Tong L, Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase, 2003; 299: 2064-2067. Reprinted with permission from AAAS. 4. ACETYL-COA CARBOXYLASE INHIBITORS As critical enzymes in fatty acid synthesis and energy metabolism, ACCs are pathogenically implicated in several human diseases, including metabolic syndromes and deadly 172 Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 malignancies, and thus may be potent therapeutic targets. In the past decades, ACC inhibitors have been extensively explored in preclinical and clinical trials. Discussed below are updates on the investigation and development of ACC inhibitors. Luo et al. domain [110]. These inhibitors include sulfonamide-containing spirochromane derivatives (JP119987, US20110077262A1 and US7935712) [113, 114], non-spirocyclic matter (JP119987), spiro [chromene-2,4-piperidin]-4(3H)-ones (WO07011809 and WO07011811), and pyrazolospiroketone (US 20110028390) [115]. 4.1. Categories of Acetyl-CoA Carboxylase Inhibitors ACC inhibitors include two main classes: natural and non-natural (artificial) compounds. As summarized in Table 1 [17, 68-72], natural ACC inhibitors are isolated from natural products, such as Soraphen A (WO03011867) from Sporangium cellulosum [73-75], avenaciolide (WO03094912 and JP035998) from Aspergillus avenaceus, chloroacetylated biotin (US6242610 and US6485941) from beans, egg yolks, and cauliflower [72, 76, 77], pseudopeptide pyrrolidine dione antibiotics (Moiramide and Andrimid, US7544709 and US20050080129) from bacteria [78, 79], curcumin (WO05113069 and US20050267221) from turmeric [80]. The natural products inhibit ACC activity by three modes. Curcumin phosphorylates and inactivates ACC via activating AMPK [81-83], Moiramide B and Andrimid act as a CT inhibitor, and other natural products inhibit the BC activity by interacting with the allosteric site [78, 79]. Chemically synthesized inhibitors are composed of three subclasses based on their chemical structures Table 2 [18, 33, 84-111]. The first subclass possess commonly extended linear aliphatic region. Inhibitory activity of these compounds depends on their intracellular conversion to CoA thioesters, inhibiting ACC activity by competing with acetylCoA in the CT catalyst. This subclass of ACC inhibitors includes anthranilic acid derivatives (2-amino-,,trifluoro-p-toluic acids; US4307113 and JP11171848), sulfonamide derivatives (N-(1-[4-[2-(4-isopropoxyphenoxy)1,3-thiazol-5-yl]phenyl]ethyl)ethyl) acetamide; US0191323 and WO0202101), benzodioxepine derivatives (A1, 3,3Dimethyl-7-(4-methylsulfanyl-phenylethynyl)-3,4-dihydro2H-benzo[b][1,4] dioxepine; US0113374), alkynyl-substituted thiazole derivatives (A1, N-[4-(2-furyl)-5-(4-pyridyl) thiazol-2-yl]pyridine-4-carboxamide; US0105919), heteroaryl-substituted thiazole derivatives (A1, 4-(6-((dimethylamino)methyl)pyridin-3-yl)-N-(4-(pentyloxy)-3(trifluoromethyl) phenyl) thiazol-2-amine; US0041720), , -dicarboxylic acid derivatives (MEDICA 16 and ESP55016; US4711896), benzoic acid derivative (S-2E; US5145865), furan-2,5-dicarboxylic acid diamides (TOFA; US3546255), aryloxyphenoxypropionate derivatives (Haloxyfop; US0014643), and cyclohexanedione derivatives (sethoxydim, US4640706). The second subclass of ACC inhibitors is bipiperidinylcarboxamide pharmacophores or cyclohexyl. They are potent, reversible, isozyme-nonselective inhibitors targeting the CT domain of ACC [112], and however, the cyclohexyl derivatives exhibit potent inhibition of human ACC2, 10-fold selectivity over inhibition of human ACC1 [33]. These compounds include bipiperidinylcarboxamide analogs (CP640186), (4-piperidinyl)-piperazine, pseudopeptide pyrrolidine dione antibiotics, benzthiazolylamide analogs, and cyclohexyl derivative. The third subclass of ACC inhibitors is spirochromanone pharmacophores and they may inhibit ACC by targeting CT 4.2. Popular Acetyl-CoA Carboxylase Inhibitors Although thousands of ACC inhibitors have been developed thus far, most published reports are based on studies with these compounds Table 3, which are actively applied/investigated in agriculture for weeding and in laboratory animals for the treatment of obesity, type 2 diabetes mellitus, or cancer. 4.2.1. Soraphen A Soraphen A (1S,2S,3E,5R,6S,11S,14S,15R,16R,17S, 18S)-15,17-dihydroxy-5,6,16-trimethoxy-2,14,18-trimethyl11-phenyl-12,19-dioxabicyclo[13.3.1] nonadec-3-en-13-one) (WO03011867) was isolated from the culture broth of Sorangium cellulosum, a soil-dwelling myxobacterium [73, 74]. This polyketide natural product contains an unsaturated 18-membered lactone ring, an extracyclic phenyl ring, two hydroxyl groups, three methyl groups, and three methoxy groups [74, 116, 117]. Soraphen A is an allosteric inhibitor of the BC domain, binding to the interface between the Adomain and C-domain, 25Å away from the putative ATP binding site. ATP and Soraphen A molecules are located at opposite ends of the cylindrical structure of the BC domain. Soraphen A interacts with residues from helices N and O and strands 17-20 in the C-domain, as well as several residues of helix C in the A-domain. Soraphen A is a noncompetitive eukaryotic ACC inhibitor with sensitivity at a nanomolar level; soraphen A has no inhibitory activity towards the bacterial BC subunits [74, 118-120]. This species selectivity of soraphen A is explained by the amino acid sequence and structural difference of the binding sites, e.g. the absence of 18 in E. coli BC) [117]. 4.2.2. Haloxyfop Haloxyfop (2-[4-[3-chloro-5-(trifluoromethyl)pyridin-2yl] oxyphenoxy]propanoic acid) contains pyridine moiety, and two forms of Haloxyfop are synthesized i.e. haloxyfopmethyl and haloxyfop-ethoxyethyl (US0184980). Haloxyfops are commercially used as pre- and post-emergence selective herbicides in broad leaf crops. They are absorbed by the foliage and roots and hydrolyzed to haloxyfop, inhibiting growth of meristematic tissues. The (R)-isomer, not (S)isomer, of haloxyfop is herbicidally active [34]. Another derivative, diclofop (2-(4-(2,4-dichlorophenoxy) phenoxy)propionate) (US0184980) inhibits fatty acid synthesis in Zea mays. Haloxyfop or diclofop binds to the active site at the interface of CT dimer and leads to large conformational changes of several residues, creating a highly conserved hydrophobic pocket extended into the core of the dimer [34]. Two residues Leu 1705 and Val 1967 that affect herbicide sensitivity are located in this binding site, and their mutation disrupts the structure of the domain and affect the response to this inhibitor. Acetyl-CoA Carboxylase Inhibitors Table 1. Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 173 Natural ACC Inhibitors. ACC Inhibitors Chemical Formula Action Mechanism Sources Active Species Selectivity Ref. Soraphen OMe Inhibit BC reaction Myxobacteria Sorangium Cellulosum Fungal ACC1 [17, 68] Eukaryote ACC2 Bacteria ACC2? [69-71] [72] (e.g. Soraphen A) OMe O O O OH OMe OH O Avenaciolide O H O O ACC1 Eukaryote ACC2 Inhibit CT reaction Bacteria Bacteria -- [131, 133, 138] Activate AMPK Turmeric Mammalian ACC2 [82] Eukaryote O O R2 R3 O NH N H N H O Curcumin derivative O O O HO OH OCH3 Table 2. Bacteria O H Pseudopeptide pyrrolidine dione R1 Beans, egg yolks, and cauliflower NH N H S (e.g. Andrimid, Moiramide B) Inhibit BC reaction Fungal C8H17 O Cl Aspergillus avenaceus H O Chloroacetylated biotin Inhibit glutamate transport in mitochondria ? OCH3 Non-natural ACC Inhibitors. ACC Inhibitors Chemical Formula Action Mechanism Active Species Selectivity Ref. Inhibitors with Linear Aliphatic Region Anthranilic acid derivatives O Inhibit carboxylase reaction? Bacteria ACC1, ACC2 [84-85] Suppress Eukaryote ACC1, ACC2 [86] Mammalian ACC2 [87] Eukaryote NH OR1 H N R1 Sulfonamide derivatives O H S N O2 Benzodioxepine derivatives R O O ACC activation? O R2 ? 174 Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 Luo et al. (Table 2) Contd…. ACC Inhibitors Chemical Formula O Alkynyl-substituted thiazole derivatives Action Mechanism S Selectivity Ref. ? Eukaryote? ACC2 [88-91] ? Eukaryote? ACC1, ACC2 [92] Inhibit CT reaction Eukaryote ACC1, ACC2 [93-94] Noncompetitively inhibit ACC by S-2ECoA Eukaryote ACC1, ACC2 [95-97] Inhibit CT reaction Bacteria ACC1, ACC2 [111] NH R1 O O Heteroaryl-substituted thiazole derivatives R3 N R2 N R1 Alkanedicarboxylic derivatives Active Species O O O OH HO (e.g. MEDICA 16, ESP-55016) R2 Benzoic acid derivative (e.g.S-2E) O O R1 R2 Furan-2,5-dicarboxylic acid diamides Eukaryote R1 (e.g. TOFA) O Aryloxyphenoxypropionates R1 R2 (e.g. Haloxyfop) Cyclohexanediones N O COOH Inhibit CT reaction Grass -- [98-100] Inhibit CT reaction Grass -- [98-101] Inhibit CT reaction Eukaryote ACC1, ACC2 [18, 102103] Inhibit CT reaction Eukaryote ACC1, ACC2 [104] Me O R1 O (e.g. Sethoxydim) N O O R3 R2 Inhibitors with Bipiperidinylcarboxamide Pharmacophore or Cyclohexyl Bipiperidinylcarboxamide analog (e.g. CP640186) O N O N N O O (4-Piperidinyl)-piperazine N N O N N N O Acetyl-CoA Carboxylase Inhibitors Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 175 (Table 2) Contd…. ACC Inhibitors Chemical Formula Benzthiazolylamide analogs Action Mechanism R2 O Active Species Selectivity Ref. Inhibit CT reaction Eukaryote ACC1, ACC2 Inhibit CT reaction Mammalian ACC1, ACC2 (10-fold selectivity over inhibition of human ACC1) [33] Inhibit CT reaction Mammalian ACC1, ACC2 [107] Inhibit CT reaction Mammalian ACC1, ACC2 [108] Inhibit CT reaction Mammalian ACC1, ACC2 [109] Inhibit CT reaction Mammalian ACC1, ACC2 [110] N [18, 105106] NH S NHR1 O O Cyclohexyl derivatives O NH HN O R Inhibitors with Spirochromaone Pharmacophore Sulfonamide-containing Spirochromane Derivatives O R1 R2 O H N A R3 R4 O R3 Non-spirocyclic matter R1 R4 R2 H N R5 R6 O Spiro[chromene-2,4piperidin]-4(3H)-ones O R1 O N R2 O O Azaspirochromanones R1 N O N R2 O 176 Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 Table 3. Luo et al. Popular ACC Inhibitors. Inhibitors Chemical (Abbr.) Formula Soraphen A O O Chemical Name Molecular Weight Molecular Formula (1S,2S,3E,5R,6S,11S,14S,15R,16R,17S,18S )-15,17-Dihydroxy-5,6,16-trimethoxy2,14,18-trimethyl-11-phenyl-12,19dioxabicyclo [13.3.1]nonadec-3-en-13-one 520.65 C29H 44O8 (2E,4E,6E)-N-[(1S)-3-[[(2S)-3-Methyl-1[(3R,4S)-4-methyl-2,5-dioxopyrrolidin-3yl]-1-oxobutan-2-yl]amino]-3-oxo-1phenylpropyl]octa-2,4,6-trienamide 479.57 C27H 33N3 O5 (2E,4E)-N-[(1S)-3-[[(2S)-3-Methyl-1[(3R,4S)-4-methyl-2,5-dioxopyrrolidin-3yl]-1-oxobutan-2-yl]amino]-3-oxo-1phenylpropyl]hexa-2,4-dienamide 453.53 C25H 31N3 O5 2-[4-[3-Chloro-5-(trifluoromethyl)pyridin2-yl]oxyphenoxy]propanoic acid 361.70 C15H 11ClF3NO4 2-[1-(Ethoxyamino)butylidene]-5-(2ethylsulfanylpropyl)cyclohexane-1,3-dione 327.48 C17H 29NO 3S 5-Tetradecoxyfuran-2-carboxylic acid 324.45 C19H 32O4 OH O O O HO Andrimid O H N O O H N O H N O O Moiramide B H N O O H N O H N O O Haloxyfop Cl HO O O N F F F O Sethoxydim S HN O O ToFA OH O O O Acetyl-CoA Carboxylase Inhibitors Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 177 (Table 3) Contd…. Inhibitors Chemical (Abbr.) Formula O S-2E N Chemical Name Molecular Weight Molecular Formula (+)-(S)p -[1-( p-Tertbutylphenyl)-2-oxo-4-pyrrolidinyl]methoxybenzoic acid 519.61 C28 H 42NO 6 3,3,14,14Tetramethylhexadecanedioic acid 342.51 C20H 38O4 8-Hydroxy-2,2,14,14-Tetramethylpentadecanedioic acid 344.49 C19H 36O5 [(3R)-1-[1-(Anthracene-9carbonyl)piperidin-4-yl]piperidin3-yl]-morpholin-4-ylmethanone 485.62 C30H 35N3 O3 O OH O MEDICA 16 O OH HO O O ESP55016 OH HO O OH CP640186 O N O N N O 4.2.3. Sethoxydim Sethoxydim (2-[1-(ethoxyamino)butylidene]-5-(2-ethylsulfanylpropyl)cyclohexane-1,3-dione) (US4602935 and US0033897) inhibits lipid synthesis in two dicot species, Nicotiana sylvestris (wild tobacco) and Glycine max (soybean) [121]. It is a selective post-emergence herbicide used to control annual and perennial grass weeds in broad-leaved vegetables, fruits, fields, and ornamental crops. Sethoxydim is rapidly absorbed through the leaf surfaces, transported in the xylem and phloem, and accumulated in the meristematic tissues. Non-susceptible broadleaf species have a different acetyl-CoA carboxylase binding site resistant to sethoxydim. Sethoxydim is water-soluble and does not bind readily with soils, thus being mobile. 4.2.4. TOFA Five-tetradecyloxy-2-furoic acid (TOFA) (US3546255) itself has no activity. In adipocytes and hepatocytes, TOFA is converted to 5-tetradecyloxy-2-furoyl-CoA (TOFyl-CoA) that binds to CT domain and exerts an allosteric inhibition on ACCs. TOFA is a mammalian ACC inhibitor. The inhibitory activity of TOFA depends on its concentration relative to fatty acids, cells, and nutritional state. In isolated rat adipocytes, TOFA inhibits fatty acid synthesis and leads to accumulation of lactate and pyruvate, and release of CO2 by blocking synthesis of malonyl-CoA [122]. Ketogenesis from palmitate was slightly inhibited (~ 20%) by TOFA at a concentration less than CoA, but the inhibition was almost complete (up to 90%) at a concentration equal to or greater than the CoA [15]. In some conditions, TOFA may inhibit fatty acid synthesis, but not affect fatty acid oxidation [122-124]. TOFA can also inhibit glycolysis as a secondary effect of fatty acid synthesis inhibition and resultant citrate accumulation, a metabolite inhibitor of phosphofructokinase [125]. TOFA inhibition of ACCs in human cancer cells is controversial. It has been reported that TOFA induces the apoptosis of lung cancer cells NCI-H460 and colon carcinoma cells HCT-8 and HCT-15, but not of some breast and ovary cancer cells, such as MCF-7 [15, 126-129]. 4.2.5. Andrimid Andrimid ((2E,4E,6E)-N-[(1S)-3-[[(2S)-3-methyl-1[(3R,4S)-4-methyl-2,5-dioxopyrrolidin-3-yl]-1-oxobutan-2yl]amino]-3-oxo-1-phenylpropyl]octa-2,4,6-trienamide; JP11171848) is a hybrid non-ribosomal peptide-polyketide 178 Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 antibiotic that can block the carboxyl-transfer reaction. Structure–activity studies have led to development of new analogues with modified pseudopeptide motifs and improved efficacies in vivo and in vitro [130]. Andrimid and moiramide (A, B and C) are both natural antibiotics with a hybrid non-ribosomal peptide polyketide scaffold that is acylated at the N-terminus and modified by a pyrrolidine dione moiety at the C-terminus. This class of molecules is widely distributed in nature and has received considerable attention after their cellular target is discovered as ACCs [131]. Low primary sequence homology and structural distinction between the prokaryotic and eukaryotic ACCs has made bacterial ACCs a long appreciated target for antibacterial drug development. The andrimid biosynthetic gene cluster from Pantoea agglomerans encodes an admT with homology to the arboxyltransferase (CT) -subunit encoded by accD. E. coli cells with admT overexpression are resistant to andrimid. When AdmT and CT -subunit AccA are overexpressed in E. coli cells, an active heterologous tetrameric CT A2T2 complex is formed. Andrimid-inhibition assay shows an IC50 of 500 nM for the A2T2 complex, compared to 12 nM for E. coli CT A2D2. These data suggested that AdmT, as an AccD homolog, confers resistance to andrimid [130]. 4.2.6. Moiramide B Pseudopeptide pyrrolidine dione antibiotics are isolated from three distinct bacterial species of proteobacteria: Enterobacter sp., Vibrio sp., and Pseudomonas fluorescens [132]. These antibiotics have broad antibacterial activity against Gram-positive bacteria, such as Staphylococci and Bacilli, and Gram-negatives, such as E. coli. The chemical Moiramide B ((2E,4E)-N-[(1S)-3-[[(2S)-3-methyl-1-[(3R, 4S)-4-methyl-2,5-dioxopyrrolidin-3-yl]-1-oxobutan-2yl]amino]-3-oxo-1-phenylpro-pyl]hexa-2,4-dienamide; US7544709) inhibits carboxyltransferase activity of ACCs [131, 133]. In vitro and bacterial studies indicates that Moiramide B demonstrates inhibitory activity at nanomolar levels[39, 133, 134]. 4.2.7. ESP-55016 Luo et al. enantiomers (1-(4-tert-butylphenyl)-2-oxo-pyrrolidine-4-carboxylic acid, N-[(S)-(-)-[4-methyl-(alpha-methyl)benzyl]]-1(4-tert-butylphenyl)-2-oxo-pyrrolidine-4-carboxyamide, 4bromo-2-fluorobenzamide of (+)-4-[1-(4-tert-butylphenyl)-2oxo-pyrrolidine-4-yl]-methyloxy-benzoic acid) (US4831055) showed an essentially equipotent activity in inhibiting fatty acid- and sterol-biosynthesis, lowering down blood cholesterol and triglyceride levels [136, 137]. The in vivo active form is S-2E ((+)-(S)-p-[1-(p-tert-butylphenyl)-2-oxo-4pyrrolidinyl] methoxybenzoic acid) that is converted into S2E-CoA in the liver, exerting non-competitive inhibition of ACCs at Ki = 69.2M. S-2E-CoA also effectively inhibits 3hydroxy-3-methylglutaryl coenzyme-A (HMG-CoA) reductase at Ki = 18.11M [136]. When administered at 10 mg/kg orally, liver S-2E-CoA are sufficient to inhibit HMG-CoA reductase and ACCs, and therefore S-2E may be useful in the treatment of familial hypercholesterolemia and mixed hyperlipidemia [95, 96, 137]. 4.2.9. CP-640186 CP-640186 ([(3R)-1-[1-(anthracene-9-carbonyl) piperidin-4-yl]piperidin-3-yl]-morpholin-4-ylmethanone; WO03072197) is a potent inhibitor of mammalian ACCs, which can reduce body weight and improve insulin sensitivity in animals. It is non-selective towards two isoforms ACC1 and ACC2 with an IC50 at 50nM in rat, mouse and monkey [68]. In experimental animals, CP-640186 decreases malonyl-CoA in lipogenic and oxidative tissues, reducing fatty acid synthesis and stimulating fatty acid oxidation [18]. In sucrose-fed rats, CP-640186 reduces triglycerides in the liver, muscle and adipose, and body weight by selectively reducing fats but not lean body mass. In these animals, CP-640186 also reduces leptin levels and induces hyperinsulinemia stemmed from high sucrose diet [18]. 5. APPLICATIONS OF ACETYL-COA CARBOXYLASE INHIBITORS 5.1. Herbicides in Agriculture The earliest application of ACC inhibitors is in agriculture. Two classes of herbicides targeting ACCs, aryloxyphenoxypropionates (Haloxyfop) and cyclohexanediones (Sethoxydim), have been commercially used for more than twenty years [118]. ESP-55016 (8-hydroxy-2,2,14,14-tetramethyl-pentadecanedioic acid; US4711896), a -hydroxy-alkanedicarboxylic acid, is converted in vivo into a CoA derivative, ESP55016-CoA, which markedly inhibits the activity of ACC. ESP55016 dually inhibits fatty acid and sterol synthesis in vivo and in primary rat hepatocyte culture [135]. In obese female Zucker (fa/fa) rats [135], ESP55016 favorably reduces serum non-HDL-cholesterol (non-HDL-C), triglyceride, and non-esterified fatty acid levels, but increases serum HDL-C and -hydroxybutyrate in a dose-dependent manner. ESP55106 also increases the oxidation of [14C]-palmitate in a carnitine palmitoyl transferase-I (CPT-I)-dependent manner [135]. This indicates that ESP-55016 affects both fatty acid and sterol synthesis and fatty acid oxidation through the ACC/malonyl-CoA/CPT-I axis. ACC inhibitors are also used to control invading organisms that depend on lipid synthesis for rapid proliferation [131, 138, 139]. Antibacterial ACC inhibitors include (-)avenaciolide, chloroacetylated biotin, and pseudopeptide pyrrolidine dione antibiotics (Andrimid and Moiramide B). Especially, Andrimid and Moiramide B are natural antibiotics with broad antibacterial activity against Gram-positive and negative bacteria, such as Staphylococci, Bacilli, and E. coli [131, 138]. Antifungal ACC inhibitors include soraphen A, (-)-avenaciolide, CP640186, MEDICA-16, and TOFA [39, 69, 73, 74]. 4.2.8. S-2E 5.3. Treatment of Metabolic Syndromes S-2 ((+/-)-4-[1-(4-tert-Butylphenyl)-2-oxo-pyrrolidine-4yl]methyloxybenzoic acid), a anti-lipidemic agent, and its Over the past 30 years, a variety of ACC inhibitors have demonstrated treatment activity in animal models of dyslipi- 5.2. Antibiotics in Infection Diseases Acetyl-CoA Carboxylase Inhibitors demia [140, 141]. For example, alkyloxyarylcarboxylic acids (e.g., TOFA) showed marked hypolipidemic activity in both rats and monkeys [142, 143], and MEDICA, MEDICA-16 in particular, displayed hypolipidemic, anti-diabetic, and antiatherosclerotic activity in relevant animal models [144-146]. The alkylthioacrylic acids appear to have similar activity to MEDICA in intervening dyslipidemia in animals [147-149]. In addition, S-2E may hold the promise for the treatment of familial hypercholesterolemia and mixed hyperlipidemia [95, 96], and -hydroxy-alkanedicarboxylic acid, ESP 55016, favorably alters serum lipid profile of the Zucker rat diabetic dyslipidemia [135]. CP-640186 is an isozyme-nonselective ACC inhibitor, equally inhibiting ACC1 and ACC2 in rat, mouse, monkey, and human. This chemical reduces fatty acid synthesis and triglyceride secretion without affecting cholesterol synthesis, thus decreasing apo-B secretion but not apo-A1; CP-640186 also stimulates fatty acid oxidation [17, 18]. 5.4. Cancer Therapy Exploration of ACC inhibitors for anticancer therapy is a novel attracting field. De novo fatty acid synthesis is required for carcinogenesis, and in cancer cells, up to 95% fatty acids used are newly synthesized despite adequate nutritional lipid supplies [150]. The newly synthesized fatty acids in malignant cells are used for biomembrane synthesis and lipid second messengers, promoting cell growth and proliferation [151]. Therefore, the lipogenesis pathway is a cancer target [152]. As a critical, rate-limiting enzyme in fatty acid de novo biosynthesis, ACC1 is upregulated in multiple types of human cancers, such as breast and prostate tumors. ACC is a novel target for cancer therapy [153]. Specific silencing of ACC1 by RNA interference (RNAi) results in caspase-mediated apoptosis of breast, colon and prostate cancer cells by depleting fatty acids/lipids and inducing oxidative stress derived from membrane damage of mitochondria [154, 155]. Similarly, our studies revealed that AKR1B10 mediates ACC1 stability and fatty acid synthesis, and silencing of AKR1B10 triggers ACC1-mediated breast cancer cell growth inhibition and apoptosis [65]. Therefore, fatty acid synthesis is essential for cancer cell growth and survival, and ACC inhibitors may represent a novel class of potent antitumor agents [66, 155, 156]. TOFA (5-tetradecyl-oxy-2-furoic acid) decreases fatty acid synthesis and induces caspase activation and cell death in most PCa cell lines by reducing ACC-mediated fatty acid synthesis and inhibiting expression of androgen receptor (AR), neuropilin-1 (NRP1) and Mcl-1 [157]. ACC inhibitor soraphen A at nanomolar levels can block fatty acid synthesis and stimulate fatty acid oxidation in LNCaP and PC-3M prostate cancer cells, inducing apoptosis [19, 158], and TOFA showed capability of triggering apoptosis of lung (NCI-H460) and colon (HCT-8 and HCT-15) carcinoma cells through disturbing their fatty acid synthesis [126]. It is obvious that further studies are merited to develop ACC inhibitors as anticancer agents. 6. CURRENT & FUTURE DEVELOPMENTS ACCs catalyze the production of malonyl-CoA from acetyl-CoA and malonyl-CoA is an essential component for Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 179 fatty acid elongation and yet is an inhibitor of fatty acid oxidation. Therefore, ACCs are critical for fatty acid metabolism and organism growth and viability, explaining their broadly conservation from bacteria to humans. Inhibition of ACC activity is a potential treatment strategy for microbial infections, metabolic syndromes, and cancer in humans. Currently available ACC inhibitors inhibit ACC activity through binding to the carboxyltransferase-domain or the biotin carboxylase-domain. Among mechanistically distinct ACC inhibitors, isozyme-nonselective ACC inhibitors may hold better therapeutic potential via decreasing fatty acid synthesis and enhancing oxidation. Isozyme-selective inhibitors should have advantages and liabilities associated with a single isozyme inhibition. However, it should be noted that isozyme nonselective ACC inhibitors may also have issues, e.g. ACC1 knockout mice show embryonic lethality [159] and also ACC2 inhibition may be ineffective [160]. The current intensive research on ACCs and inhibitors could lead to the development of novel therapeutic agents against metabolic syndromes and cancers. Clinical efficacy of the ACC inhibitors should be expected. Tissue fat reduction, weight loss, improved insulin sensitivity, and relief of dyslipidemia were observed in ACC2 knockout mice [161-163] and in experimental animals treated with isozyme-nonselective ACC inhibitors [18, 68] or ACC antisense oligonucleotides [164], which compels a study in human clinics. The clinic efficacy evaluation could focus initially on approved endpoints for obesity and dyslipidemia, improved insulin sensitivity, and reduction in hyperinsulinemia. Weight loss, percentage body fat, and regional fat distribution may be evaluated in longer-term clinical trials. The treatment outcomes of coronary heart diseases and type 2 diabetes or other significant health outcomes related to metabolic syndromes could also be assessed [17]. Several potential hurdles hamper the application of ACC inhibitors in humans. First, malonyl-CoA is important in controlling insulin secretion in the pancreas. Reduction of malonyl-CoA levels via ACC inhibition could offset beneficial effects on glucose-stimulated insulin secretion due to reduction of pancreatic -cell fat contents [165-167]. It remains to be determined whether ACC inhibition-induced malonyl-CoA and subsequent fat content decrease in pancreatic -cells adversely influence insulin secretion and thus offsets beneficial effects in clinic [17]. Second, hypothalamic malonyl-CoA is a negative regulator of food intake in feeding behavior [168], and thus reduction of malonylCoA in the hypothalamus may be undesirable. Consistent with this observation, ACC2 knockout mice consume more food even though they weigh less than wild-type animals [161, 162], and Leptin-deficient Lepob/Lepob (ob/ob) mice treated with CP-640186 increased food consumption concomitant with weight loss [68]. Therefore, weight reduction in clinical trials with ACC inhibitors may occur together with increased food consumption, and what is worse is that it remains unknown whether this phenomenon counteracts the positive metabolic effects of an ACC inhibitor, especially for the inhibitors crossing the blood-brain barrier [169-172]. Third, studies in ex vivo working hearts suggest that elevated fatty acid oxidation during and after ischemia may contribute to contractile dysfunction and increase ischemic injury [173]. It remains to be understood whether ACC 180 Recent Patents on Anti-Cancer Drug Discovery, 2012, Vol. 7, No. 2 inhibition could potentially increase myo-cardial injury after an ischemic event for fatty acid oxidation enhanced by ACC inhibition [17]. Obviously, these concerns need to be taken into consideration in the future efforts to develop ACC inhibitors for the treatment of metabolic syndromes and cancers, and more ACC inhibitors are being invented for high efficiency and low toxicity [174-176]. Luo et al. [5] [6] [7] ABBREVIATIONS ACCs = Acetyl-CoA carboxylase AKR1B10 = Aldo-keto reductase family 1 member B10 AMPK = AMP-activated kinase AR = Androgen receptor BC = Biotin carboxylase BCCP = Biotin carboxyl carrier protein BRCA1 = Breast cancer protein 1 C/EBP = CCAAT-enhancer-binding proteins CPT-I = Carnitine palmitoyltransferase I CT = Carboxyltransferase FOXO = Forkhead box O HMG-CoA = 3-Hydroxy-3-methylglutaryl coenzymeA NRP1 = Neuropilin-1 PKA = Protein kinase A PPARs = Peroxisome-proliferation-activated receptors SREBP-1 = Sterol-regulatory-element binding protein 1 TOFA = Five-tetradecyloxy-2-furoic acid ACKNOWLEDGEMENTS We thank Dr. Zhangyong Li in Department of Laboratory Medicine, the First People’s Hospital of Chenzhou for drawing chemical structures in ChemDraw in this article. [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] CONFLICT OF INTEREST The authors declare no potential conflict of interest. REFERENCES [1] [2] [3] [4] Mojiminiyi OA, Al Mulla FAbdella NA. 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