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Chapter 11 INTRODUCTION TO GENETICS A. MENDEL Early Life Abbot Gregor Johann Mendel (1822-1884, Johann Mendel) was a monk of the Augustinian order n Brunn, Austria. After failing to qualify as a high school biology teacher, he joined the monastic order. In 1851, his superiors sent him to the University of Vienna for 2 years. Work Mendel began experiments on the effects of crossing different strains of the common garden pea. He used mathematics to examine his results. Mendel chose seven different pairs of contrasting pea traits with which to work. Note: D=dominant trait and R=recessive trait. a. Seed form: round (D) or wrinkled (R). b. Color of seed: yellow (D) or green(R). c. Color of flower: Purple (D) or white (R). d. Color of unripe seed pods: green (D) or yellow (R). e. Shape of ripe seed pods: inflated (D) or constricted between seeds (R). f. Length of stem: short (9-18 inches) (R) or tall (6-7 feet) (D). g. Position of flower: axial (in axial of leaves) (D) or terminal (at the ned of the stem) (R). Vocabulary Genotype-Combination of an organisms genes. Phenotype-Combination of visible traits. Allele- forms of a gene that code for a particular trait. For example, W is a gene that codes for a widows peak and w codes for a straight hairline. Although they both code for the hairline they are two different alleles, alternative forms of the gene that code for the same trait. Homozygous; “true breeding strain” it has only one kind of allele for the trait. Heterozygous, “ hybrid strain” has alleles for both traits. F1- first generation B. PRINCIPLE OF DOMINANCE When crossing true–breeding round with a true-breeding wrinkled strain Mendel discovered the following: 1/4 of the total F2 were round and true breeding (homozygous). 1/2 of the total F2 were round and not true breeding (heterozygous). 1/4 of the total F2 were wrinkled and true breeding (homozygous). Mendel termed the trait that appeared in the F1 generation the dominant trait, and the trait that failed to appear in the F1 generation the recessive trait. Mendel used algebraic symbols to represent what was happening. He let upper case letters (A) represent the dominant factor and lower case letters (a) represent the recessive factors. The heterozygous had both factors (Aa). If the heterozygous plant was ‘Aa’, the plant received ‘A’ from one parent and ‘a’ from the other parent. If a plant was homozygous dominant, it obtained one ‘A’ from each parent. If a female parent was ‘AA’ and the male parent was ‘aa’, Mendel reasoned that the female could only give ‘A’ to the offspring and that the male could only give ‘a’ to the offspring. All offspring would be ‘Aa’. If the ‘Aa’ offspring were allowed to mate, then 1/4 of their offspring would be ‘AA’, 1/2 would be ‘Aa’ and 1/4 would be ‘aa’. P1 = AA x aa F1 = Aa x Aa F2 = AA 2Aa aa Mendel’s conclusions: The seven characteristics were controlled by transferable factors. The factors came in two forms: dominant and recessive. Today, we call these transferable factors genes. Every heterozygote (hybrid) had 2 different copies of the factor controlling each character – one from each parent. The dominant factor determined the appearance of the plant (phenotype). C. MENDEL’S FIRST LAW: THE LAW OF SEGREGATION The two alleles for a trait separate (or segregate) when gametes are formed. When a heterozgote reproduces, its gametes will be of two types in equal proportions. Either the gamete will have ‘A’ or ‘a’. Aa 1/2 A or 1/2 a Early in the 20th century, these relationships were put into graphic form by Reginald Punnett. The forms are called punnett squares. Each little square represents a possible offspring. Above the squares are the parents’ gametes Parental Gametes Possible offspring Genotypess If Mom Aa and Dad Aa decided to have a child, what are the possible genotype of the offspring and their probabilities? Mom’s gametes: _______ or _______ Dad’s gametes: _______ or _______ Construct a punnett square: Parental Gametes ? ? ? There is a __ in 4 or ___% chance of the child being AA There is a __ in 4 or ___% chance of the child being Aa There is a __ in 4 or ___% chance of the child being aa ? D. MENDEL”S SECOND LAW OF INDEPENDENT ASSORTMENT In gamete formation each pair of factors segregates independently of other pairs of factors. In chromosome terms, each pair of homologs segregate independently of every other pair in Meiosis I. Pairs of alternative traits behaved independently. This is because maternal and paternal chromosome pairs line up and separate during meiosis. If an organism is heterozygous at two unlinked loci (two genes for two traits are on different pairs of chromosomes), each locus will assort independently of any other. Crosses Mendel first studied one characteristic at a time. He next crossed plants with two sets contrasting traits, e.g. a plant that is true breeding for both round and yellow seeds with a true breeding plant with wrinkled and green seeds. The F1 seeds would all be round and yellow. A=round, a=wrinkled, B=yellow, b=green. P1=AABB X aabb F1=AaBb If we cross the F1 together to get an F2, then how can we predict the F1 offspring? We first have to determine the parental gametes of the F1, and then place these gametes in a Punnett square. Two parents AaBb mate; how can we determine the gametes? We know that the parents will give their offspring one A (or a) gene and one B (or b) gene. What are the different combinations? The law of independent assortment is applied in determining the parental gametes. FOIL AB,Ab,AB, or ab with equal possibilities. There are four possible gametes from each parent. Below is the Punnett square. Gametes AB Ab AB ab AB AABB AABb AaBB AaBb Ab Aabb Aabb AaBb Aabb AB AaBb AaBb AaBB AaBb ab AaBb Aabb AaBb Aabb From this, one can determine the phenotypes. E. DOMINANT RELATIONSHIPS 1. Lethal recessive Homozygous recessive organisms cannot survive. 2. Partial dominance or Incomplete Dominance The heterozygote is intermediate between the phenotypes of the two homozygotes, and not exactly like either one of them. Snap dragons r=red, w=white Rr x ww rw = pink rw x rw = 1 red, 2 pink, 1 white Sometimes the phenotype of the heterozygote is not simply a blending o compromise between the two homozygotes, but has unique features of its own. E.g. Palomino horses are heterozygous for coat color. Crosses between two palominos result in brown, 2 palominos, and 1 white foal. 3. Codominance Sometimes one homozygote will show one phenotype, the other homozygote will have a different phenotype, and the heterozygote will show both phenotypes. Blood types. AA x BB AB Neither allele is recessive, both are equally dominant 4. Multiple Alleles There are more than two alleles possible at a single locus. For example, researcher have discovered 37 different alleles for eye color at one locus in fruit flies. Anyone individual has, at most, two different alleles of the 37 people. F. GENE INTERACTIONS AND THE MODIFIED MENDELIAN RATIOS We have talked about Mendel and his peas. We have learned that if we cross two individual that are heterozygous (AaBb), we get a 9:3:3:1 phenotypic ratio for the offspring. This holds true only if the two pairs of alleles act independently. For example, this does not work out for coat color of mice. At one locus, B is dominant over b. BB and Bb mice are black and bb mice are brown. BB x bb Bb = black mice Bb x Bb 3/4 black mice, 1/4 brown mice. At another locus, there is a gene C which is dominant over c. CC and Cc mice can make pigment. cc mice cannot make pigment, they are albinos. 1. Epistasis Msking of a trait determined by one pair of genes by the actions of another pair of genes. If we cross pure-breeding brown mice (Ccbb) with truebreeding white mice (ccBB) we get all black mice (ccBb). A cross between these F1 black mice result in: CcBb x CcBb = 9 black, 4 white, 3 brown mice. The Cc locus is epistatic to the Bb locus. Gametes CbCb cB Cb Cb CB CCBB CCBb CcBB CcBb Cb CCBb Ccbb CCBb Ccbb CB CCBb CcBb CcBB CcBb cb CCBb CCbb CcBb ccbb 2. Pleiotropy Pleitropy occurs when a single gene can affect more than 1 characteristic (e.g. coat color in cats: white cats often have blue and eyes and are deaf). G. THE GENETICS OF SEX In 1910 Thomas Hunt Morgan began breeding experiments with the fruit fly Drosophila Melanogaster. Moran found a single male with white eyes and was convinced that this was due to a mutation, since red is the normal eye color. Morgan took the white-eyed male and mated it with some red-eyed sisters. The F1 generation among themselves. Of the flies in the F2 generation: 1/4 were red eyed males, 1/2 were red eyed females and 1/4 were white eyed males. All the white eyed flies were male. Morgan crossed the white eyed females with red eyed males. The resulting flies were all white-eyed males and all red eyed females. Morgan surmised that the gene carrying the white eye color was located on the sex chromosome, specifically on the X chromosome. H. SEX LINKAGE IN HUMANS Several recessive traits are carried on the X chromosomes; many cause abnormalities. Colorblindness: The most common type is red/green colorblindness. To be affected, a man only needs to receive one recessive gene from his mother (on the X chromosome) since Y is not allelic to X and cannot mask the recessive allele. Affected women must receive the recessive gene from both parents. I. CHROMOSOMAL ALTERATIONS Alterations of Chromosome Number Nondisjunction occurs when homologous chromosomes do not separate properly during meiosis I or the sister chromosomes fail to separate in meiosis II. The result is an abnormal chromosome number, called aneuploidy (2n+1 or 2n –1). Polyploidy More than two complete chromosome sets, for example, Triploidy: 3n and tetraploidy: 4n. Polyploidy occurs when there is nondisjunction of a complete set of chromosomes. Down’s syndrome is polyploidy of the 21st chromosome Alterations of Chromosome Structure The breakage of a chromosome can lead to a variety of rearrangements affecting the genes of the chromosome. Fragmennts without centromeres are usually lost when the cell divides. The chromosome from which the fragment originated will be missing certain genes (deletion). In other cases, the fragment may join to the homologous chromosome (duplication). The fragment may reattach to the original chromosome inverted (inversion). The fragmen may attach to a nonhomologous chromosome (translocation). During the crossing over process, some chromatids break at different places, and one partner gives up more genes than it receives. Examples of the types of chromosomal anomalies The following are results of nondisjunction because of irregular meiosis: An extra autosomal chromosome (e.g. trisomy 21 (Down’s Syndrome), Edwards syndrome b. An extra sex chromosome (e.g. XYY, Klienfelters Syndrome, and Triple X syndrome) c. Missing a sex chromosome (e.g.. Turners Syndrome, XO) The following are not results of nondisjunction: a. d. Deletion of a piece of an autosomal chromosome (e.g. crit du chat). e. Translocation: piece of one chromosome is added to a nonhomologous chromosome (e.g. translocation 21 to 14, one cause of Downs Syndrome). J. HUMAN GENTICS AND CHROMOSOMES The number of chromosomes in the human species is 46; 44 autosomes and two gender (sex) chromosomes. A graphic representation of the chromosome present in the nucleus of a cell is known as karyotype. From a karyotype, we can determine the number, size, and shape of the chromosomes as well as identify the homologous pairs. Sometimes, it is difficult to distinguish between similar looking chromosomes. However, the chromosomes can be stained to show a banding pattern. The chromosomes with the similar banding patterns are homologous chromosomes.