Chpt15_PosNegCntrl.doc
... amino acids from small dicarboxylic acids (components of the the citric acid cycle). If the cell has plenty of the product already (in the presence of the product), the the enzymes catalyzing its synthesis are not needed, and the operon encoding them is repressed. In the absence of the product, when ...
... amino acids from small dicarboxylic acids (components of the the citric acid cycle). If the cell has plenty of the product already (in the presence of the product), the the enzymes catalyzing its synthesis are not needed, and the operon encoding them is repressed. In the absence of the product, when ...
Centipede Hox genes - Development
... condition maintained in the centipede. Last, we found that Hox expression correlates with tagmatic boundaries, consistent with the theory that changes in Hox genes had a major role in evolution of the arthropod body plan. ...
... condition maintained in the centipede. Last, we found that Hox expression correlates with tagmatic boundaries, consistent with the theory that changes in Hox genes had a major role in evolution of the arthropod body plan. ...
Identification of novel micro RNAs and their targets in Cocos
... Department of Biotechnology, University of Calicut, Calicut University PO, Malappuram 673 635, India Bioinformatics Infrastructure Facility, Department of Biotechnology, University of Calicut, Calicut University PO, Malappuram 673 635, India ...
... Department of Biotechnology, University of Calicut, Calicut University PO, Malappuram 673 635, India Bioinformatics Infrastructure Facility, Department of Biotechnology, University of Calicut, Calicut University PO, Malappuram 673 635, India ...
The percentage of bacterial genes on leading versus
... well predict the percentage of leadings-strand genes in a genome with a linear correlation coefficient = 0.9, as shown in Fig. 5. Specifically, the 23 functional categories are RNA binding, cell cycle, structural molecule activity, plasma membrane, cell envelope, cellular homeostasis, generation of ...
... well predict the percentage of leadings-strand genes in a genome with a linear correlation coefficient = 0.9, as shown in Fig. 5. Specifically, the 23 functional categories are RNA binding, cell cycle, structural molecule activity, plasma membrane, cell envelope, cellular homeostasis, generation of ...
"Dual-coding Regions in Alternatively Spliced Human Genes". In
... are annotated as more than one type of codon position. Not surprisingly, two key factors strongly influence the identification of dual-coding regions: the completeness of transcriptome data and the accuracy of reading frame annotation. Based on a set of high-quality and wellannotated transcripts, we o ...
... are annotated as more than one type of codon position. Not surprisingly, two key factors strongly influence the identification of dual-coding regions: the completeness of transcriptome data and the accuracy of reading frame annotation. Based on a set of high-quality and wellannotated transcripts, we o ...
Genome-wide RNAi Robert Barstead
... methods including screens for suppressor mutants to identify important genetic interactions. RNAi works in other species. Whether it can or should be applied on a large scale to studies of these other species depends, in part, on whether it is found to be sufficiently reliable in these systems. Reli ...
... methods including screens for suppressor mutants to identify important genetic interactions. RNAi works in other species. Whether it can or should be applied on a large scale to studies of these other species depends, in part, on whether it is found to be sufficiently reliable in these systems. Reli ...
The eyeless homeodomain is dispensable for eye development in
... Mardon et al. 1994). All three genes are activated by EY and are required for EY-induced formation of ectopic eyes, which suggests that these genes act downstream of ey in the eye development pathway (Bonini et al. 1997; Shen and Mardon 1997; Halder et al. 1998). This hypothesis was confirmed for so ...
... Mardon et al. 1994). All three genes are activated by EY and are required for EY-induced formation of ectopic eyes, which suggests that these genes act downstream of ey in the eye development pathway (Bonini et al. 1997; Shen and Mardon 1997; Halder et al. 1998). This hypothesis was confirmed for so ...
Disruption of mCry2 restores circadian rhythmicity in mPer2 mutant
... pathway. As a note of caution, one should keep in mind that the phenotypic effect of genetic modifications of genetically altered animals in a nonhomogeneous genetic background are prone to epigenetic effects. However, we tried to minimize this risk by using double heterozygous animals throughout th ...
... pathway. As a note of caution, one should keep in mind that the phenotypic effect of genetic modifications of genetically altered animals in a nonhomogeneous genetic background are prone to epigenetic effects. However, we tried to minimize this risk by using double heterozygous animals throughout th ...
DRACULA2 is a dynamic nucleoporin with a role in
... and dra2-1 (0 h) were transferred to white plus far-red light (W+FR) for 1 h. Data represent mean±s.e. bioluminescence measurements from at least 20 seedlings relative to the activity levels in PBL seedlings at 0 h. (B) Representative 7-day-old PBL and dra2-1 seedlings grown under W. (C) Length of h ...
... and dra2-1 (0 h) were transferred to white plus far-red light (W+FR) for 1 h. Data represent mean±s.e. bioluminescence measurements from at least 20 seedlings relative to the activity levels in PBL seedlings at 0 h. (B) Representative 7-day-old PBL and dra2-1 seedlings grown under W. (C) Length of h ...
Arabidopsis Ethylene-Responsive Element Binding
... (A) The amino acid sequences of the ERF domain from various ERF proteins are aligned. They include AtERF1 to AtERF5 (this article); tobacco ERF1 to ERF4 (Ohme-Takagi and Shinshi, 1995); Pti4, Pti5, and Pti6 (Zhou et al., 1997); TINY (Wilson et al., 1996); CBF1 (Stockinger et al., 1997); DREB1 and DR ...
... (A) The amino acid sequences of the ERF domain from various ERF proteins are aligned. They include AtERF1 to AtERF5 (this article); tobacco ERF1 to ERF4 (Ohme-Takagi and Shinshi, 1995); Pti4, Pti5, and Pti6 (Zhou et al., 1997); TINY (Wilson et al., 1996); CBF1 (Stockinger et al., 1997); DREB1 and DR ...
Developmental, transcriptome, and genetic alterations associated
... Genes downregulated in CB were enriched in gametophyte-preferentially expressed transcripts, indicating the absence of regular post-meiotic germline development in CB. RNA-sequencing was also used for genetic variant calling and 14 single-nucleotide polymorphisms distinguishing the CB and PX variant ...
... Genes downregulated in CB were enriched in gametophyte-preferentially expressed transcripts, indicating the absence of regular post-meiotic germline development in CB. RNA-sequencing was also used for genetic variant calling and 14 single-nucleotide polymorphisms distinguishing the CB and PX variant ...
Stochastic Gene Expression:
... We are concerned with two patterns of stochastic gene expression. The first one is in the stochastic initiation of gene expression in a field where gene expression will eventually become homogeneous in all cells. The second is stochastic gene activation that leads to a salt-and-pepper pattern of two ...
... We are concerned with two patterns of stochastic gene expression. The first one is in the stochastic initiation of gene expression in a field where gene expression will eventually become homogeneous in all cells. The second is stochastic gene activation that leads to a salt-and-pepper pattern of two ...
Additional data file 9
... are expressed non-exclusively in the imaginal primordia, with additional expression most commonly in the CNS and Ectoderm/Epidermis. Besides the well known imaginal disc embryonic markers, snail (sna), escargot (esg) and Distal-less (Dll) eyeless (ey) and apterous (ap), we discovered CG13894 (THAP ...
... are expressed non-exclusively in the imaginal primordia, with additional expression most commonly in the CNS and Ectoderm/Epidermis. Besides the well known imaginal disc embryonic markers, snail (sna), escargot (esg) and Distal-less (Dll) eyeless (ey) and apterous (ap), we discovered CG13894 (THAP ...
6.1 Summary DTCs are widely used chemicals that are teratogenic
... (Chapter 2). These malformations were characterized by twisted, reduced and missing cartilages and a lack of ossification of endochondral bone. To gain insight into the molecular mechanisms underlying these defects, DTC induced changes in gene expression in embryonic zebrafish (PAC2) cells were meas ...
... (Chapter 2). These malformations were characterized by twisted, reduced and missing cartilages and a lack of ossification of endochondral bone. To gain insight into the molecular mechanisms underlying these defects, DTC induced changes in gene expression in embryonic zebrafish (PAC2) cells were meas ...
Phenotype and gene ontology enrichment as guides for
... In C. elegans, gene, tissue and phenotype ontologies exist with which to describe C. elegans anatomy and phenotypes respectively [5, 6]. These ontologies are curated by professional curators at WormBase, which is a repository of all C. elegans data [7]. However, enrichment tools only exist for gene ...
... In C. elegans, gene, tissue and phenotype ontologies exist with which to describe C. elegans anatomy and phenotypes respectively [5, 6]. These ontologies are curated by professional curators at WormBase, which is a repository of all C. elegans data [7]. However, enrichment tools only exist for gene ...
Identification of Potential Corynebacterium ammoniagenes Purine
... for the de novo synthesis of purine [4-6, 37] and other nucleotides [1, 3, 33, 36, 37]. PurR binds to a 16-bp palindromic sequence that overlaps the -35 promoter region of the pur genes and inhibits transcription [4-6, 14, 37]. Hypoxanthine and guanine serve as two co-repressors for pur gene regulat ...
... for the de novo synthesis of purine [4-6, 37] and other nucleotides [1, 3, 33, 36, 37]. PurR binds to a 16-bp palindromic sequence that overlaps the -35 promoter region of the pur genes and inhibits transcription [4-6, 14, 37]. Hypoxanthine and guanine serve as two co-repressors for pur gene regulat ...
Part 3 - Bioinformatics.ca
... • Be able to identify binding sites for known TFs • Be able to discover TF binding motifs in genomic regions like ChIP-seq peaks or promoters using Galaxy and ...
... • Be able to identify binding sites for known TFs • Be able to discover TF binding motifs in genomic regions like ChIP-seq peaks or promoters using Galaxy and ...
SERK and APOSTART. Candidate Genes for
... PpSERK and APOSTART. RACE identified two members of PpSERK and two of APOSTART. On the basis of full lengths, amplification of cDNA and genomic DNA samples with PpSERK1, PpSERK2, APOSTART1, and APOSTART2 specific primers enabled us to perform the end-to-end PCR and obtain complete cDNA and DNA clone ...
... PpSERK and APOSTART. RACE identified two members of PpSERK and two of APOSTART. On the basis of full lengths, amplification of cDNA and genomic DNA samples with PpSERK1, PpSERK2, APOSTART1, and APOSTART2 specific primers enabled us to perform the end-to-end PCR and obtain complete cDNA and DNA clone ...
Gene Section SIL (SCL/TAL1 interrupting locus) Atlas of Genetics and Cytogenetics
... and marked apoptosis of the neural folds. Genetic evidence showed that SIL is required for the Sonic Hedgehog response pathway. SIL phosphorylation and interactions with PIN1 is required for maintenance of the mitotic checkpoint. ...
... and marked apoptosis of the neural folds. Genetic evidence showed that SIL is required for the Sonic Hedgehog response pathway. SIL phosphorylation and interactions with PIN1 is required for maintenance of the mitotic checkpoint. ...
