EIN4 and ERS2 Are Members of the Putative Ethylene Receptor
... the longest cDNA was approximately the same as the size of the corresponding RNA transcript on an RNA gel blot (data not shown), indicating that this cDNA is full length, or nearly so. Comparing the genomic DNA and cDNA sequences revealed that EIN4 contains one intron. The predicted protein has 766 ...
... the longest cDNA was approximately the same as the size of the corresponding RNA transcript on an RNA gel blot (data not shown), indicating that this cDNA is full length, or nearly so. Comparing the genomic DNA and cDNA sequences revealed that EIN4 contains one intron. The predicted protein has 766 ...
Evolution by the birth-and-death process in multigene
... mouse class Ia genes are not orthologous with the human class Ia genes (24–26), and therefore different gene symbols are used for them (Fig. 2). Actually, most different orders of mammals seem to have nonorthologous class Ia genes. The number of class Ia genes in mammals is usually 1–3, but there ar ...
... mouse class Ia genes are not orthologous with the human class Ia genes (24–26), and therefore different gene symbols are used for them (Fig. 2). Actually, most different orders of mammals seem to have nonorthologous class Ia genes. The number of class Ia genes in mammals is usually 1–3, but there ar ...
Identification of genes involved in the same
... Ravasz and Barabási, 2002; Ravasz et al., 2002). Detecting these functional modules, learning how functions are carried out in detail and how individual functional modules relate to each other, are current research topics in this field (Barabási and Oltavi, 2004; Wu et al., 2005). Modularity is reco ...
... Ravasz and Barabási, 2002; Ravasz et al., 2002). Detecting these functional modules, learning how functions are carried out in detail and how individual functional modules relate to each other, are current research topics in this field (Barabási and Oltavi, 2004; Wu et al., 2005). Modularity is reco ...
asense is a Drosophila neural precursor gene and is
... In the PNS, expression of ase closely resembles the early expression of the PNS marker line A37, which marks all sense organ precursors (SOPs) and their progeny (Ghysen and O’Kane, 1989). A subset of these cells variably depends on ase (Dambly-Chaudière and Ghysen, 1987; Jarman et al., 1993). Of the ...
... In the PNS, expression of ase closely resembles the early expression of the PNS marker line A37, which marks all sense organ precursors (SOPs) and their progeny (Ghysen and O’Kane, 1989). A subset of these cells variably depends on ase (Dambly-Chaudière and Ghysen, 1987; Jarman et al., 1993). Of the ...
Loss And Gain Of Function Experiments Implicate TMEM18
... gap between the identification of a variant as being associated with an adiposity phenotype and the understanding of how that variant actually influences energy balance. Murine models have proven to be essential in moving from statistical association to a fuller understanding of the biology of the g ...
... gap between the identification of a variant as being associated with an adiposity phenotype and the understanding of how that variant actually influences energy balance. Murine models have proven to be essential in moving from statistical association to a fuller understanding of the biology of the g ...
Identification of Genes Mediating Drosophila Follicle Cell Progenitor
... cells (Young 2011). Modifications to nucleosomal histones occur in concert with the establishment of heterochromatic zones, Polycombassociated domains and active promoters. However, directly measuring chromatin changes in rare progenitor cells within a developing tissue is not usually technically fea ...
... cells (Young 2011). Modifications to nucleosomal histones occur in concert with the establishment of heterochromatic zones, Polycombassociated domains and active promoters. However, directly measuring chromatin changes in rare progenitor cells within a developing tissue is not usually technically fea ...
Genetic interaction of Lhx4 and Prop1 - Development
... The clinical features of patients vary considerably, and they are not explained completely by genotype-phenotypical correlations, suggesting that genetic interactions with variants in other genes may be one cause of heterogeneity (Flück et al., 1998). To investigate this idea we characterized the ph ...
... The clinical features of patients vary considerably, and they are not explained completely by genotype-phenotypical correlations, suggesting that genetic interactions with variants in other genes may be one cause of heterogeneity (Flück et al., 1998). To investigate this idea we characterized the ph ...
Molecular Biology of Transcription and RNA Processing
... translation. Messenger RNA is the only form of RNA that undergoes translation. Transcription of mRNA and posttranscriptional processing of mRNA are principal areas of focus in this chapter. Functional RNAs perform a variety of specialized roles in the cell. The functional RNAs carry out their activ ...
... translation. Messenger RNA is the only form of RNA that undergoes translation. Transcription of mRNA and posttranscriptional processing of mRNA are principal areas of focus in this chapter. Functional RNAs perform a variety of specialized roles in the cell. The functional RNAs carry out their activ ...
PDF
... from two different litters; therefore, four animals per genotype for each mating were analyzed. We carried out three independent reverse transcription experiments for each sample on 1 μg of total RNA. qPCR was performed on 2 ng cDNA in a Light-Cycler 480 system (Roche). The primers used to amplify t ...
... from two different litters; therefore, four animals per genotype for each mating were analyzed. We carried out three independent reverse transcription experiments for each sample on 1 μg of total RNA. qPCR was performed on 2 ng cDNA in a Light-Cycler 480 system (Roche). The primers used to amplify t ...
lac
... -DNA sequence that functions exclusively as a DNA sequence -affects only DNA to which it is physically linked -eg. promoter/operator ...
... -DNA sequence that functions exclusively as a DNA sequence -affects only DNA to which it is physically linked -eg. promoter/operator ...
jxb.oxfordjournals.org - Oxford Academic
... Our previous study revealed that nuclear proteins extracted from immature rice endosperm can specifically bind to the 53 bp (C53) DNA fragment located in the 5ʹ upstream region of SBE1, and the Ha-2 fragment of Wx can compete with this binding activity, suggested that the biosynthesis of amylose and ...
... Our previous study revealed that nuclear proteins extracted from immature rice endosperm can specifically bind to the 53 bp (C53) DNA fragment located in the 5ʹ upstream region of SBE1, and the Ha-2 fragment of Wx can compete with this binding activity, suggested that the biosynthesis of amylose and ...
PPT
... Strong, easy to detect, but rare in population; may not be reflective of common disease. Also, hard to collect family data. ...
... Strong, easy to detect, but rare in population; may not be reflective of common disease. Also, hard to collect family data. ...
Hemoglobin research and the origins of molecular
... system is regulated via heterotropic interactions with other molecules, such as protons, anions, and bisphosphosphoglyceric acid (2,3 BPG or, in the older convention, 2,3 DPG),12 and by intramolecular, or homotropic, interactions for optimal normal respiratory function.13 Cooperative oxygen binding ...
... system is regulated via heterotropic interactions with other molecules, such as protons, anions, and bisphosphosphoglyceric acid (2,3 BPG or, in the older convention, 2,3 DPG),12 and by intramolecular, or homotropic, interactions for optimal normal respiratory function.13 Cooperative oxygen binding ...
ELMER: An R/Bioconductor Tool Inferring Regulatory Element
... 6.4 TF ranking plot . . . . . . . . . . . . . . . . . . . ...
... 6.4 TF ranking plot . . . . . . . . . . . . . . . . . . . ...
as a PDF
... factor to recognize UAA efficiently (Klobutcher and Farabaugh, 2002). Future work will determine if these ⫹1 frameshifting events have any regulatory function and whether other mRNA elements are involved. Two other examples of ⫹ 1 frameshifting in eukaryotes warrant mention. The ABP140 gene of S. ce ...
... factor to recognize UAA efficiently (Klobutcher and Farabaugh, 2002). Future work will determine if these ⫹1 frameshifting events have any regulatory function and whether other mRNA elements are involved. Two other examples of ⫹ 1 frameshifting in eukaryotes warrant mention. The ABP140 gene of S. ce ...
Increased sex chromosome expression and epigenetic
... 2006). However, the X and Y chromosomes are continually remodelled during the transition between meiosis and spermiogenesis, and histone modifications associated with transcriptionally active chromatin [e.g. histone acetylation and histone H3 dimethylated on lysine 4 (H3K4me2)] are also enriched on ...
... 2006). However, the X and Y chromosomes are continually remodelled during the transition between meiosis and spermiogenesis, and histone modifications associated with transcriptionally active chromatin [e.g. histone acetylation and histone H3 dimethylated on lysine 4 (H3K4me2)] are also enriched on ...
Alu repeat analysis in the complete human genome: trends and
... Alu content, 6453 genes had Alus percentages ranging from 10 to 20%, 3534 genes had 20–30%, 1860 genes had 30–40% and 685 genes had >40% Alus whereas remaining 6930 genes were found without any Alu insertions. This clearly reflects that Alus are not uniformly distributed within genes (Supplementary ...
... Alu content, 6453 genes had Alus percentages ranging from 10 to 20%, 3534 genes had 20–30%, 1860 genes had 30–40% and 685 genes had >40% Alus whereas remaining 6930 genes were found without any Alu insertions. This clearly reflects that Alus are not uniformly distributed within genes (Supplementary ...
Having it both ways: transcription factors that bind DNA and RNA
... transcription factors, but for which subsequent research has shown apparent RNA-binding activities and functions (Table 2). With the expectation that such `moonlighting' by DNA-binding proteins might be more common than previously imagined, we highlight some old and new examples of this phenomenon. ...
... transcription factors, but for which subsequent research has shown apparent RNA-binding activities and functions (Table 2). With the expectation that such `moonlighting' by DNA-binding proteins might be more common than previously imagined, we highlight some old and new examples of this phenomenon. ...
GCF (T-14): sc-133419 - Santa Cruz Biotechnology
... GCF (GC-rich sequence DNA-binding factor), also known as C2orf3 (chromosome 2 open reading frame 3), transcription factor 9 (TCF-9) or DNABF, is a 781 amino acid nuclear protein that belongs to the GCF family. Widely expressed, GCF binds the GC-rich sequences of β-Actin, EGFR and calciumdependent pr ...
... GCF (GC-rich sequence DNA-binding factor), also known as C2orf3 (chromosome 2 open reading frame 3), transcription factor 9 (TCF-9) or DNABF, is a 781 amino acid nuclear protein that belongs to the GCF family. Widely expressed, GCF binds the GC-rich sequences of β-Actin, EGFR and calciumdependent pr ...
factor occupancy and gene expression Effects of sequence variation
... DNA near TF hubs had increased sensitivity to DNase I when compared with regions bound by a single factor (Fig. 1C). The result indicates either that these regions of open chromatin were more accessible to TFs before binding, or that the recruitment of many TFs to these regions resulted in more exte ...
... DNA near TF hubs had increased sensitivity to DNase I when compared with regions bound by a single factor (Fig. 1C). The result indicates either that these regions of open chromatin were more accessible to TFs before binding, or that the recruitment of many TFs to these regions resulted in more exte ...