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Structural and Functional Characterization of Shrimp Viral Proteins
Structural and Functional Characterization of Shrimp Viral Proteins

... remain largely unknown. In the present study, we conducted the first transcriptomic profiling of host responses in hemocytes in order to identify the differentially expressed genes associated with resistance to TSV in L. vannamei. High-throughput RNA-Seq was employed, obtaining 193.6 and 171.2 milli ...
Integrating the Bioinformatic Technology Group into your research
Integrating the Bioinformatic Technology Group into your research

... • Physical processes: Cell signalling and organisation, reaction kinetics, binding, structural biology, statistical physics of soft matter ...
same genes, different fates final evaluation assignment
same genes, different fates final evaluation assignment

... SAME GENES, DIFFERENT FATES FINAL EVALUATION ASSIGNMENT You have been hired as a science writer for the Discovery Channel. The company is introducing a new line of children’s educational products in different areas of biology. Your job is to create a product that will teach children (about 10 years ...
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... • All tRNA molecules in both bacterial and eukaryotic cells undergo processing after transcription. • Eukaryotic cells usually have many copies of each tRNA gene. ...
Answers to Mastering Concepts Questions
Answers to Mastering Concepts Questions

... 4. Mutations are used to learn how genes normally function and to develop new varieties of crop plants. Mutations can also be used to trace the evolution of viruses and other infectious agents. ...
How do we get proteins? - Sebastian Charter Junior High
How do we get proteins? - Sebastian Charter Junior High

...  Ribosomal RNA= ribosome that reads the mRNA  Transfer RNA= transfers the amino acid from the code ...
國立嘉義大學九十七學年度
國立嘉義大學九十七學年度

... (3) Which of the following statements are correct? For the incorrect statements, correct them specifically (hint: the correction should not be simply from “can” to “cannot”, or from “is” to “isn’t”). (10%) (i) Restriction endonucleases cut DNA at specific sites that always located between genes. (ii ...
7 Self study questions
7 Self study questions

... 1. Explain why ORF scanning is a feasible way of identifying genes in a prokaryotic DNA sequence. 2. What modifications are introduced when ORF scanning is applied to a eukaryotic DNA sequence? 3. Describe how homology searching is used to locate genes in a DNA sequence and to assign possible functi ...
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... • Parallel approach to collection of very large amounts of data (by biological standards) • Sophisticated instrumentation, requires some understanding • Systematic features of the data are at least as important as the random ones • Often more like industrial process than single investigator lab rese ...
Regulation of Gene Expression
Regulation of Gene Expression

... Myogenic helix-loop-helix proteins (MyoD, etc.) and skeletal muscle • Trigger becoming muscle cell • Muscle-specific expression • Coordinately activate muscle genes • Specific for muscle genes ...
Slide 1
Slide 1

... Experiment 1 (47 (cDNA) microarrays) Whole brain expression data of foragers and day-olds to establish differences/similarities between 4 different species Experiment 2 (samples collected awaiting (cDNA) microarrays) Expression data on dancers of 4 different species comparing candidate CNS regions ...
Mapping disease genes (lectures 8,10)
Mapping disease genes (lectures 8,10)

... approach compares animal mutant models in a phenotypically similar human disease. One rare success in this approach is the identification of the SOX10 gene in human Wardenburg syndrome4 (WS4). This gene was identified in Dom mutant mice, which shared phenotypic traits (Hirschsprung disease, hearing ...
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... attaches directly to the gene. ...
Modeling Multiple-Allele Genes in NetLogo
Modeling Multiple-Allele Genes in NetLogo

... Modeling Multiple-Allele Genes in NetLogo By Max Harmony and Haven Mills Jim Lyons, mentor ...
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... 1. Explain the use of an antibiotic (e.g., ampicillin) resistance gene on a vector. Answer: The antibiotic resistance gene is found on the vector (also known as the plasmid). This gene confers resistance to the recombinant DNA plasmid when transformed into bacterial cells and plated on agar media co ...
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... whose product is interfered with by the drug. It is apparent that this is an important cause for resistance to chemotherapy. Our own search for other genes that might be amplified during development was negative causing us to focus on other kinds of gene control during development. “The reference ha ...
LEQ: How does RNA help to make a protein?
LEQ: How does RNA help to make a protein?

... The type of RNA that carriers the genetic information/message from DNA and coveys it to ribosomes where the information is translated into amino acid sequences ...
Personalized medicine - Pitt Department of Biomedical Informatics
Personalized medicine - Pitt Department of Biomedical Informatics

... – If so, what genes are present in these regions – HER2 amplification in ...
FunctionalGenomicsEvolution
FunctionalGenomicsEvolution

... RNA abundances between groups of interest (e.g., across populations, environmental conditions, or developmental stages) • Like all exercises in experimental biology… this involves careful consideration of: - How to remove extraneous sources of variation - How to collect and analyze the data ...
Chapter 11: Gene Expression
Chapter 11: Gene Expression

... fuse exons; ribozymes (RNA) also splice • Introns regulate RNA, bind to &/ or control expression (or maybe do nothing at all) • Exons can code for functional domains • Exons can be selected to form specific protein ...
Prioritizing GWA data File
Prioritizing GWA data File

... How to prioritize? ...
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... **Insertions and deletions can cause a… ...
Reverse Engineering of Metazoan Gene Regulatory
Reverse Engineering of Metazoan Gene Regulatory

... networks have however been poorly characterized. The recent availability of the human genome sequence, as well as genomic resources for other organisms, has permitted the development of novel methodologies that probe regulatory networks at a systems level rather than at the individual gene level. Mo ...
DNA and Gene Expression
DNA and Gene Expression

...  Benign – a tumor that remains within a mass  Malignant tumor- uncontrolled dividing cells that invade and destroy healthy tissue elsewhere in the body  Metastasis – spread of cancer cells beyond ...
Specimen Collection for Quantitative PCR Assays
Specimen Collection for Quantitative PCR Assays

... For optimal recovery of RNA, specimens should be sent with cold packs, but cannot be allowed to freeze. The sample should be sent the same day of collection to be received within 24 hours. Avoid shipping on Friday. Samples must be rejected if received in the laboratory greater than 48 hours from tim ...
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RNA-Seq



RNA-seq (RNA sequencing), also called whole transcriptome shotgun sequencing (WTSS), is a technology that uses the capabilities of next-generation sequencing to reveal a snapshot of RNA presence and quantity from a genome at a given moment in time.
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