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LP 6 Chromosome abnormalities
LP 6 Chromosome abnormalities

Investigating the Use of Multiplex PCR to Detect Pathogens
Investigating the Use of Multiplex PCR to Detect Pathogens

2) Chromatin = uncoiled DNA
2) Chromatin = uncoiled DNA

...  If you have brown hair, what makes it brown, as opposed to blonde, or red? o A pigment called______________, a_____________, is what you see as “brown” in the hair.  What makes you tall or short? o The lengths of your bones are made up of a framework of__________________. ...
State v. Johnson
State v. Johnson

... DRIBBEN, supra, at 104-05 (citing Ranajit Chakraborty, Sample Size Requirements for Addressing the Population Genetic Issues of Forensic Use of DNA Typing, 64 HUM. BIOLOGY 141, 157 (1992)). Additionally, the recommended sample size for the NRC’s "non-modified" ceiling method, proposed in the same re ...
Prenatal Chromosomal Microarray
Prenatal Chromosomal Microarray

... • A cytogenetic test used to determine if there are chromosomal imbalances, either large (e.g. whole extra or missing chromosomes, also detected by standard karyotype) or smaller extra (micro-duplication) or missing (micro-deletion) pieces of genetic information, also called copy number variants (CN ...
Glencoe Biology
Glencoe Biology

...  Each of the 46 human chromosomes was cleaved.  These fragments were combined with vectors to create recombinant DNA, cloned to make many copies, and sequenced using automated sequencing machines.  Computers analyzed the overlapping regions to generate one continuous sequence. ...
Prenatal Chromosomal Microarray - GEC-KO
Prenatal Chromosomal Microarray - GEC-KO

Locked Nucleic Acid - LNA™
Locked Nucleic Acid - LNA™

... contain the six common nucleobases (T, C, G, A, U and mC) that appear in DNA and RNA and thus are able to form base-pairs according to standard Watson-Crick base pairing rules. Oligonucleotides incorporating LNA™ have increased thermal stability and improved discriminative power with respect to thei ...
cached copy
cached copy

... opens the door to new paths not taken by nature when life evolved. In 1994, for example, Leonard M. Adleman of the University of Southern California demonstrated how DNA can be used as a computational device. In this article I will discuss another nonbiological use of DNA: the building of structures ...
Slide 1 - Schools
Slide 1 - Schools

...  Gene therapy aims to treat a disease by supplying a functional allele  One possible procedure – Clone the functional allele and insert it in a retroviral vector – Use the virus to deliver the gene to an affected cell type from the patient, such as a bone marrow cell – Viral DNA and the functional ...
Genetics - Mother Baby University
Genetics - Mother Baby University

Detecting copy number variants and runs of homozygosity on a
Detecting copy number variants and runs of homozygosity on a

... invaluable insight into a number of conditions. When analysed in conjunction with copy number variation (CNV) data from array comparative genomic hybridisation (aCGH) arrays, this insight can aid in the identification of additional genetic variants to those yielded by the CNV data alone. Protocols f ...
Laboratory of Insect Genetics and Biosciences (IGB) Dept. Biology
Laboratory of Insect Genetics and Biosciences (IGB) Dept. Biology

... the DNA of mammalian somatic cells”. A recent paper showed the existence of non-CG methylation in mammalian somatic cells (PMID:26030523). In fact, non-CG methylation in mammals seems to be more informative of gene expression than CG methylation. R: It is true that DNA methylation has been detected ...
A Brief History of PCR - Bio-Rad
A Brief History of PCR - Bio-Rad

CH4. The Genomic Biologists Toolkit
CH4. The Genomic Biologists Toolkit

... antibiotic or that permits cells to make an amino acid required for growth. These are the basic requirements that all modern cloning vectors contain, but beyond these basic requirements, there can be a number of additional features that make specific vectors useful for various purposes. Thus, severa ...
ch4-TheGenomicBiologistsToolKit_1.3
ch4-TheGenomicBiologistsToolKit_1.3

... antibiotic or that permits cells to make an amino acid required for growth. These are the basic requirements that all modern cloning vectors contain, but beyond these basic requirements, there can be a number of additional features that make specific vectors useful for various purposes. Thus, severa ...
Comparison of methods for high quantity and quality - Funpec-RP
Comparison of methods for high quantity and quality - Funpec-RP

... Due to increasing concern for food safety, cow’s milk can be used for population screening for disease diagnosing, eradicating genetic diseases and disease-resistance/susceptibility studies (Psifidi et al., 2010). In early studies, the phenol-chloroform method was generally used for DNA extraction f ...
Physical mapping shows that the unstable oxytetracycline gene
Physical mapping shows that the unstable oxytetracycline gene

... fragments of 415 kb and 300 kb hybridized. The 415 kb fragment is the fragment that carries the OTC-cluster (Gravius et al., 1993). This fragment was isolated from a PFGE gel, labelled with digoxigenin and used as a probe for colony hybridizations of the S. rimosus gene bank (S. Pandza and others, u ...
Wendy Weisz has Down syndrome.
Wendy Weisz has Down syndrome.

... phenotypes associated with the loss or addition of genetic material. ...
Wide-spread polyploidizations during plant evolution Dicot
Wide-spread polyploidizations during plant evolution Dicot

... (Dp3a), was described from UV-irradiated materials by Stadler and Roman in the 1940s [Stadler LJ, Roman H (1948) Genetics 33(3):273–303]. The genetic behavior of Dp3a is reminiscent of a ring chromosome, but fluoresecent in situ hybridization detected telomeres at both ends, suggesting a linear stru ...
Brooker Chapter 8
Brooker Chapter 8

... In simple translocations the transfer of genetic material occurs in only one direction ...
Developing codominant PCR markers in pines
Developing codominant PCR markers in pines

... this pool of PCR fragments, have very similar gene structures. Both 3' specific primers also amplified genomic DNA, and the size of single PCR fragment from these reactions was consistent with expectations predicted in Figure 1: the 2025-specific 3' primer produced a fragment of about 780 bp, wherea ...
Unit VII BioTech/Gen
Unit VII BioTech/Gen

... _______________ or ________________1. An enzyme either __ or __ bonds. _____________________2. If it makes bonds, energy is __. _____________________3. If it breaks bonds, energy is ___. _____________________4. In genetic engineering, either adding genes to a chromosome, or cutting genes out of a c ...
Comparison of the separation of Candida albicans chromosome
Comparison of the separation of Candida albicans chromosome

... composed of both bands F and G, and band E/H of Figure 3 was a doublet composed of both bands E and H. To test if bands F/G and E/H of Figure 3 were doublets, we attempted to separate by FIGE the chromosome components in the doublets by increasing the switching interval from 100 seconds forward and ...
Polymerase chain reaction and its applications
Polymerase chain reaction and its applications

... to be amplif|ed, called the target or template DNA. Following separation (denaturation) of the target sequence, a pair of short synthetic DNA sequences called oligonucleotides or primers is bound to the template (annealing/ hybridization).These serve as a starting point for the addition of nucleotid ...
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Comparative genomic hybridization



Comparative genomic hybridization is a molecular cytogenetic method for analysing copy number variations (CNVs) relative to ploidy level in the DNA of a test sample compared to a reference sample, without the need for culturing cells. The aim of this technique is to quickly and efficiently compare two genomic DNA samples arising from two sources, which are most often closely related, because it is suspected that they contain differences in terms of either gains or losses of either whole chromosomes or subchromosomal regions (a portion of a whole chromosome). This technique was originally developed for the evaluation of the differences between the chromosomal complements of solid tumor and normal tissue, and has an improved resoIution of 5-10 megabases compared to the more traditional cytogenetic analysis techniques of giemsa banding and fluorescence in situ hybridization (FISH) which are limited by the resolution of the microscope utilized.This is achieved through the use of competitive fluorescence in situ hybridization. In short, this involves the isolation of DNA from the two sources to be compared, most commonly a test and reference source, independent labelling of each DNA sample with a different fluorophores (fluorescent molecules) of different colours (usually red and green), denaturation of the DNA so that it is single stranded, and the hybridization of the two resultant samples in a 1:1 ratio to a normal metaphase spread of chromosomes, to which the labelled DNA samples will bind at their locus of origin. Using a fluorescence microscope and computer software, the differentially coloured fluorescent signals are then compared along the length of each chromosome for identification of chromosomal differences between the two sources. A higher intensity of the test sample colour in a specific region of a chromosome indicates the gain of material of that region in the corresponding source sample, while a higher intensity of the reference sample colour indicates the loss of material in the test sample in that specific region. A neutral colour (yellow when the fluorophore labels are red and green) indicates no difference between the two samples in that location.CGH is only able to detect unbalanced chromosomal abnormalities. This is because balanced chromosomal abnormalities such as reciprocal translocations, inversions or ring chromosomes do not affect copy number, which is what is detected by CGH technologies. CGH does, however, allow for the exploration of all 46 human chromosomes in single test and the discovery of deletions and duplications, even on the microscopic scale which may lead to the identification of candidate genes to be further explored by other cytological techniques.Through the use of DNA microarrays in conjunction with CGH techniques, the more specific form of array CGH (aCGH) has been developed, allowing for a locus-by-locus measure of CNV with increased resolution as low as 100 kilobases. This improved technique allows for the aetiology of known and unknown conditions to be discovered.
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