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Overview of Microarray Types
Overview of Microarray Types

... b) Shows a protein microarray composed of spots which act as sandwich immunoassays. Antibodies are spotted onto the chips and cell lysate or a solution is applied to the slide. Antibodies are incubated with the solution, with later washing to remove non-specific binding. The sandwich complexes forme ...
Protein Threading Optimization Using
Protein Threading Optimization Using

... •Superimposing the templates on one another, pairwise, along the aligned residues , we get the initial consensus model, Tc. •Performing some local changes, i.e fragment matching, insertion, deletion of aligned residues, we optimized Tc. •Measured the distance between optimized consensus model Tc and ...
Protein structure
Protein structure

... sequence of 20 different L-α-amino acids, also referred to as residues. For chains under 40 residues the term peptide is frequently used instead of protein. To be able to perform their biological function, proteins fold into one, or more, specific spatial conformations, driven by a number of noncova ...
Table S9.
Table S9.

... This domain, found in various prokaryotic proteins, has no known function. This family consists of several proteins of uncharacterised function. This family of proteins with unknown function appear to be restricted to Cyanobacteria. This family of proteins with unknown function appears to be restric ...
Protein Structure
Protein Structure

... e. Ion-dipole ...
MOLECULAR BIOLOGY EXAM II
MOLECULAR BIOLOGY EXAM II

... this protein? Are the sequences from other organisms similar? Is it always made or only at certain times? How is the gene regulated? You have three people working for you, all are pretty handy in the lab. Outline a strategy for each to begin tackling one of these questions, (or another critical issu ...
DHaganTalk1
DHaganTalk1

... • The secondary structure can be defined as the regular, repeated patters of folding of the protein backbone. The two most common folding patterns are the alpha helix and the beta sheet. • Patterns result from regular hydrogen bond patterns of backbone atoms. ...
Antigen-capture blocking enzyme-linked immunosorbent assay
Antigen-capture blocking enzyme-linked immunosorbent assay

... those of the reference technique. In variability experiments, the ELISA gave consistent results when the same serum was evaluated on different wells and different plates. These results indicated that truncated recombinant S protein is a suitable alternative to the complete virus as antigen in ELISA ...
Acid/Base, AAs, Collagen, Hb
Acid/Base, AAs, Collagen, Hb

... Same properties, but react differently Naturally occurring as L-Amino Acids Zwitterion Double ionic charge with overall 0 charge pKa (ask them if they have to know them or not) pI!!! ...
Page 50 - hrsbstaff.ednet.ns.ca
Page 50 - hrsbstaff.ednet.ns.ca

... 21. The primary structure of a protein refers to the sequence of amino acids. Genes in DNA determine this sequence. 22. (a) The two types of secondary protein structure are -helices and -pleated sheets. (b) Hydrogen bonding stabilizes secondary protein structures. 23. The amino acid proline causes ...
Practice Exam II
Practice Exam II

... 3). The salting out procedure is a process where salts (ions) are added to a protein solution such that the high ion concentration competes with proteins for favorable interactions (solvation) with water, resulting in the precipitation of the protein. Would you expect the salting out phenomenon to b ...
BIOMOLECULES UNIT 3 Chemistry Review: Atoms
BIOMOLECULES UNIT 3 Chemistry Review: Atoms

... Triglycerides-can be solid at room temp. or liquid at room temp, level is measured in blood to determine if there is too much fat in circulation. Can cause circulatory problems. Fat is stored in fat cells called adipose tissue. ...
5IntracellTrans
5IntracellTrans

... B. The protein eventually will move through the vesicular pathway. C. This occurs when proteins are transported into chloroplasts and mitochondria. D. The signal peptide is cleaved after the protein enters its target destination. E. transport requires the action of a “membrane transport complex.” 2. ...
長榮管理學院九十學年度二年制技術學系招生考試
長榮管理學院九十學年度二年制技術學系招生考試

... 9. Which of the following most accurately describes the charge state of DNA under physiological conditions? a. Roughly uniformly positively charged along its length b. Roughly uniformly negatively charged along its length c. Roughly uniformly uncharged along its length d. Heterogeneously charged, wi ...
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SSE – secondary structure element (ex. helices, sheets)
SSE – secondary structure element (ex. helices, sheets)

... in PDB (September 2002) Structural comparison(3D) and database searching – other methods practice exhaustive searching Their design philosophy: ...
Cell-Free Test Expression Information Sheet
Cell-Free Test Expression Information Sheet

... We will need as much information on the protein/template as you can provide for us to make good decisions regarding the selected screening/expression conditions. Please complete a separate fact sheet for each target. ...
Module 5
Module 5

... (or motifs) common to homologous proteins. These motifs, usually of the order of 10-20 amino acids in length, usually correspond to key functional or structural elements, often domains, and are extremely useful in identifying such features in new uncharacterized proteins. There is a number of such s ...
Biology Final Jeopary 1
Biology Final Jeopary 1

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Computational Prediction of Beta Structure from Amino Acid
Computational Prediction of Beta Structure from Amino Acid

... discovery is of great interest to biological science. Though experimental approaches have yielded good results, these efforts have proven ineffective for beta-rich proteins such as amyloids and autotransport proteins - both implicated in pathologies such as Alzheimer's Disease, meningitis, and pertu ...
IL-3 - CellGenix
IL-3 - CellGenix

... Molecular mass 15.2 kDa ...
READ MORE - Bicycle Therapeutics
READ MORE - Bicycle Therapeutics

... and suspension) to produce cells to required timelines and formats to support a diverse range of cell based assays for the wider Biology team. Candidates that have demonstrated previous additional experience in a range of recombinant protein production and purification techniques will be at a signif ...
hinge regions are already ready to serve as a catalytic center
hinge regions are already ready to serve as a catalytic center

... Table 1 25 proteins, their relative inhibitors and biologically critical residues Only 25 proteins out of 140 were suitable for the following study by reasons of: 1.No or insufficient inhibition or catalyst sites information in the related literature 2. Inhibitor itself is huge polypeptide with carb ...
Proteome - Nematode bioinformatics. Analysis tools and data
Proteome - Nematode bioinformatics. Analysis tools and data

... • YPD: should have relevant data – will yeast be typical? ...
protein - Hagan Bayley
protein - Hagan Bayley

... Peroxisomes- Single membrane. Thought to divide by enlargement and division, but recent results suggest peroxisomes are derived from the ER: Cell 122, 85-95 (2005); Current Biology 15, R774-R776 (2005). No DNA or internal ribosomes ...
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Western blot



The western blot (sometimes called the protein immunoblot) is a widely used analytical technique used to detect specific proteins in a sample of tissue homogenate or extract. It uses gel electrophoresis to separate native proteins by 3-D structure or denatured proteins by the length of the polypeptide. The proteins are then transferred to a membrane (typically nitrocellulose or PVDF), where they are stained with antibodies specific to the target protein. The gel electrophoresis step is included in western blot analysis to resolve the issue of the cross-reactivity of antibodies.There are many reagent companies that specialize in providing antibodies (both monoclonal and polyclonal antibodies) against tens of thousands of different proteins. Commercial antibodies can be expensive, although the unbound antibody can be reused between experiments. This method is used in the fields of molecular biology, immunogenetics and other molecular biology disciplines. A number of search engines, such as CiteAb, Antibodypedia, and SeekProducts, are available that can help researchers find suitable antibodies for use in western blotting.Other related techniques include dot blot analysis, immunohistochemistry and immunocytochemistry where antibodies are used to detect proteins in tissues and cells by immunostaining, and enzyme-linked immunosorbent assay (ELISA).The method originated in the laboratory of Harry Towbin at the Friedrich Miescher Institute. The name western blot was given to the technique by W. Neal Burnette and is a play on the name Southern blot, a technique for DNA detection developed earlier by Edwin Southern. Detection of RNA is termed northern blot and was developed by George Stark at Stanford.
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