A Bayesian network model for protein fold and remote homologue
... Hidden Markov models have been successfully applied to protein fold recognition by using two other strategies. Homologous sequences of the unknown probe are first used to build a model which is then searched against sequences of a library of folds, or a model is built directly from a library of fold ...
... Hidden Markov models have been successfully applied to protein fold recognition by using two other strategies. Homologous sequences of the unknown probe are first used to build a model which is then searched against sequences of a library of folds, or a model is built directly from a library of fold ...
S13DobrzanskiPoland
... (carbohydrates concentrations, yeasts content, time and incubation temperature, salts concentration) (Ryszka et al. 2002). These yeasts composition was normalized with the standards of animals feeding (Ca, P, Mg, Na, Fe, Mn, Co) and were enriched with trace elements (Table 3), which biological role ...
... (carbohydrates concentrations, yeasts content, time and incubation temperature, salts concentration) (Ryszka et al. 2002). These yeasts composition was normalized with the standards of animals feeding (Ca, P, Mg, Na, Fe, Mn, Co) and were enriched with trace elements (Table 3), which biological role ...
Neisseria conserved hypothetical protein DMP12
... DNA mimic proteins are unique factors that control the DNA-binding activity of target proteins by directly occupying their DNA-binding sites. To date, only a few DNA mimic proteins have been reported and their functions analyzed. Here, we present evidence that the Neisseria conserved hypothetical pr ...
... DNA mimic proteins are unique factors that control the DNA-binding activity of target proteins by directly occupying their DNA-binding sites. To date, only a few DNA mimic proteins have been reported and their functions analyzed. Here, we present evidence that the Neisseria conserved hypothetical pr ...
medical management: portosystemic vascular anomalies (psva)
... successfully managed a spectrum of PSVA patients medically. It is difficult to judge outcome of these patients against those undergoing surgical shunt attenuation because medical management is used for 1) minimally symptomatic PSVA patients, 2) dogs failing surgical intervention, and 3) dogs with a ...
... successfully managed a spectrum of PSVA patients medically. It is difficult to judge outcome of these patients against those undergoing surgical shunt attenuation because medical management is used for 1) minimally symptomatic PSVA patients, 2) dogs failing surgical intervention, and 3) dogs with a ...
Dr. John Perozich's Full CV
... Wymore. IX European Symposium of the Protein Society. May 2011. Stockholm, Sweden. Initial analysis of an alignment of 1310 aldehyde dehydrogenases (ALDHs). A few selected families such as succinic semialdehdye dehydrogenases were examined. DNA Gyrase B and HSP90 N-Terminal Domain and Their Role in ...
... Wymore. IX European Symposium of the Protein Society. May 2011. Stockholm, Sweden. Initial analysis of an alignment of 1310 aldehyde dehydrogenases (ALDHs). A few selected families such as succinic semialdehdye dehydrogenases were examined. DNA Gyrase B and HSP90 N-Terminal Domain and Their Role in ...
A Cyanobacterial Chlorophyll Synthase-HliD
... In addition to the FLAG-ChlG protein used as bait, we identified the Ycf39 homolog Slr0399, the Slr1471 protein belonging to the Alb3/Oxa1/YidC family (hereafter, YidC), the high-light-inducible protein HliD, the Sll1167 protein from the AmpH family, and the PsaA/B core proteins of PSI (see Supplemen ...
... In addition to the FLAG-ChlG protein used as bait, we identified the Ycf39 homolog Slr0399, the Slr1471 protein belonging to the Alb3/Oxa1/YidC family (hereafter, YidC), the high-light-inducible protein HliD, the Sll1167 protein from the AmpH family, and the PsaA/B core proteins of PSI (see Supplemen ...
april7_maindocument_jvirol
... structure with a diameter of approximately 10 nm and up to several hundreds of nm in length (33, 34). The highly basic N protein has a molecular mass ranging between 45 and 60 kDa in the various groups of coronaviruses and, along with its coding RNA, is synthesized in large amounts during infection ...
... structure with a diameter of approximately 10 nm and up to several hundreds of nm in length (33, 34). The highly basic N protein has a molecular mass ranging between 45 and 60 kDa in the various groups of coronaviruses and, along with its coding RNA, is synthesized in large amounts during infection ...
X-ray structures of the N and C-terminal domains of a
... structure with a diameter of approximately 10 nm and up to several hundreds of nm in length (33, 34). The highly basic N protein has a molecular mass ranging between 45 and 60 kDa in the various groups of coronaviruses and, along with its coding RNA, is synthesized in large amounts during infection ...
... structure with a diameter of approximately 10 nm and up to several hundreds of nm in length (33, 34). The highly basic N protein has a molecular mass ranging between 45 and 60 kDa in the various groups of coronaviruses and, along with its coding RNA, is synthesized in large amounts during infection ...
Know Your Feed Terms - Alberta Agriculture and Forestry
... which can be expressed as a per cent of total dry matter or as a percentage of total nitrogen/protein. The concentration of ADIN is used to determine protein availability in heated feeds. Estimates of crude protein (CP) available to the animal can be adjusted by using the following guideline. If ADI ...
... which can be expressed as a per cent of total dry matter or as a percentage of total nitrogen/protein. The concentration of ADIN is used to determine protein availability in heated feeds. Estimates of crude protein (CP) available to the animal can be adjusted by using the following guideline. If ADI ...
Yeast longevity and aging—the mitochondrial connection
... stochastic extrinsic events. A finite life span does not in itself demonstrate a biological aging process at work. It is apparent, however, that yeasts do age. This is readily concluded from the observation of the many changes that occur during the replicative life span, some of which clearly repres ...
... stochastic extrinsic events. A finite life span does not in itself demonstrate a biological aging process at work. It is apparent, however, that yeasts do age. This is readily concluded from the observation of the many changes that occur during the replicative life span, some of which clearly repres ...
Architecture of the trypanosome RNA editing accessory complex
... Both MRB8180/MRB4150 and MRB8170/MRB4160 are the result of a chromosomal duplication in T. brucei (but not L. major), and therefore these two proteins have the same single L. major homolog. g Some of the predicted sizes for the T. brucei proteins are different from those listed on TriTrypDB because ...
... Both MRB8180/MRB4150 and MRB8170/MRB4160 are the result of a chromosomal duplication in T. brucei (but not L. major), and therefore these two proteins have the same single L. major homolog. g Some of the predicted sizes for the T. brucei proteins are different from those listed on TriTrypDB because ...
Comparison of Protein Active Site Structures for
... complexed to a ligand were excluded, since they lack any value in the functional annotation of a protein. The identification of a ligand within a protein PDB file was determined by the presence of either a HET or HETNAM record. Routinely, a single protein PDB file may contain multiple ligands. Each ...
... complexed to a ligand were excluded, since they lack any value in the functional annotation of a protein. The identification of a ligand within a protein PDB file was determined by the presence of either a HET or HETNAM record. Routinely, a single protein PDB file may contain multiple ligands. Each ...
Insights into polypharmacology from drug
... (PubChem ID 667 477), a modulator of a number of serotonin, adrenergic and histamine receptor subtypes, and staurosporine (PubChem ID 44 120 114), a protein kinase inhibitor. In Supplementary Figure S1, we represent the phylogenetic trees for GPCRs and kinases as networks in the sequence similarity ...
... (PubChem ID 667 477), a modulator of a number of serotonin, adrenergic and histamine receptor subtypes, and staurosporine (PubChem ID 44 120 114), a protein kinase inhibitor. In Supplementary Figure S1, we represent the phylogenetic trees for GPCRs and kinases as networks in the sequence similarity ...
Separation of nuclear protein complexes by blue native
... concentration of 6-AcA (750 mM), while Pol I or Pol II trace amounts are seen already on the blot even if no 6AcA in the sample buffer was used. However, all three proteins showed salt-dependent solubility and all were nearly completely solubilized at the highest (2 M) 6-AcA concentration. On the co ...
... concentration of 6-AcA (750 mM), while Pol I or Pol II trace amounts are seen already on the blot even if no 6AcA in the sample buffer was used. However, all three proteins showed salt-dependent solubility and all were nearly completely solubilized at the highest (2 M) 6-AcA concentration. On the co ...
Journal of Agricultural and Food Chemistry
... fractions from soybean and amaranth. The protein fractions shared some common electrophoretic bands as well as a similar amino acid composition. The larger percent of denaturation in protein fractions, which is associated with enthalpy and the number of ruptured hydrogen bonds, corresponds to disapp ...
... fractions from soybean and amaranth. The protein fractions shared some common electrophoretic bands as well as a similar amino acid composition. The larger percent of denaturation in protein fractions, which is associated with enthalpy and the number of ruptured hydrogen bonds, corresponds to disapp ...
Cloning and sequence analysis of putative type II fatty
... acid biosynthesis is catalysed by type II fatty acid synthase (FAS) in plastids and mitochondria. By constructing a full-length cDNA library derived from immature peanut seeds and homology-based cloning, candidate genes of acyl carrier protein (ACP), malonyl-CoA:ACP transacylase, β-ketoacyl-ACP synt ...
... acid biosynthesis is catalysed by type II fatty acid synthase (FAS) in plastids and mitochondria. By constructing a full-length cDNA library derived from immature peanut seeds and homology-based cloning, candidate genes of acyl carrier protein (ACP), malonyl-CoA:ACP transacylase, β-ketoacyl-ACP synt ...
The Effect of Chemical Treatments of Albumin and Orosomucoid on
... rats and concluded that competition arose through the particles having differing affinities for binding sites on the surface of the Kupffer cells. As indicated above, many studies have been undertaken on rates of clearance of proteins, but these have frequently been made with protein preparations of ...
... rats and concluded that competition arose through the particles having differing affinities for binding sites on the surface of the Kupffer cells. As indicated above, many studies have been undertaken on rates of clearance of proteins, but these have frequently been made with protein preparations of ...
1 Introduction
... little consequence in most patients. But when the disease is prolonged, the catabolic state can itself be damaging and prolong the disease state. Poor dietary intake and inactivity, both common in the hospital patient, will further exacerbate this. The patient will be “consumed”, not only by the dis ...
... little consequence in most patients. But when the disease is prolonged, the catabolic state can itself be damaging and prolong the disease state. Poor dietary intake and inactivity, both common in the hospital patient, will further exacerbate this. The patient will be “consumed”, not only by the dis ...
Amino Acid Metabolism
... THF – biosynthetic pathways • There are three important biosynthetic precursors synthesized from THF： N ,N 甲烯四氢叶酸 N5,N10-methylene-THF N5-methyl-THF N10-formyl-THF • N5,N10-methylene-THF acts in a central processing role in the synthesis of all of these enzymes: in order to synthesize either of the ...
... THF – biosynthetic pathways • There are three important biosynthetic precursors synthesized from THF： N ,N 甲烯四氢叶酸 N5,N10-methylene-THF N5-methyl-THF N10-formyl-THF • N5,N10-methylene-THF acts in a central processing role in the synthesis of all of these enzymes: in order to synthesize either of the ...
Ypr140wp, `the yeast tafazzin`, displays a mitochondrial
... Lyso-PC [lysophosphatidylcholine (1-acylglycerophosphorylcholine] acyltransferases (EC 2.3.1.23) catalyse the acylation of lyso-PC molecules to form PC and are involved in several important physiological processes. For example, in animal cells, the acylation of lyso-PC molecules appears to be an imp ...
... Lyso-PC [lysophosphatidylcholine (1-acylglycerophosphorylcholine] acyltransferases (EC 2.3.1.23) catalyse the acylation of lyso-PC molecules to form PC and are involved in several important physiological processes. For example, in animal cells, the acylation of lyso-PC molecules appears to be an imp ...
Tyrosine cross-linking of extracellular matrix is catalyzed by Duox, a
... the phagocyte oxidase, we have searched for and molecularly cloned homologues of gp91phox. The first of these, Nox1 (also termed Mox1, NOH-1), is expressed in nonphagocytic cells, including colonic epithelia and vascular smooth muscle (Suh et al., 1999), and functions in regulating cell growth and c ...
... the phagocyte oxidase, we have searched for and molecularly cloned homologues of gp91phox. The first of these, Nox1 (also termed Mox1, NOH-1), is expressed in nonphagocytic cells, including colonic epithelia and vascular smooth muscle (Suh et al., 1999), and functions in regulating cell growth and c ...