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MCB2010 Lecture review topics Introduction (Ch 1) Understand: What is included in the study of Microbiology. What are the contributions of Microorganism as a member of our ecosystem. Scientific Nomenclature Classification of living organisms, dormain and kingdoms, methods used Definition of species in micro-organisms v.s. eukaryotes Famous Microbiologist and their representative works. Koch, Pasteur, Jenners, Fleming, Ehrich, Hooke, Ignaz Semmelweis, Lister, Van Leeuwenhoek Spontaneous generation and biogenesis Germ theory and Koch’s postulates What is aseptic technique, pasturization, fermentation. Classification (Ch 10) Definition: Taxonomy, Phylogeny and their respective uses in classification Taxonomic Hierarchy Understand: What is included in the three domains system of classification? Definition of species Important characteristics of each of the three domains and subgroups Microorganisms Eukaryotes (Ch 12) Algae, fungi, protozoans Definition: Hyphae, mycelium, coenocytic and septate lyphae, types of fungal spores. Dimorphic fungi, trophs and cysts of protozoans, intermediate and definitive hosts, primary producer and consumer, schizogony, Understanding Sexual and asexual reproduction of fungi; major divisions of algae and differentiation characteristics of each division; major differences among phylums of protozoans; Pathogenic protozoans, intermediate hosts and vectors or means of transmission of various protozoan related diseases. Life cycle of Plasmodium. Prokaryotes (Ch 11) Bacteria Definition: Understand: Proteobacteria, Non-Proteobacteria Various groups in domain Bacteria, major characterics of each group. Names of the various groups in Proteobacteria Major characteristics of domain Archaea Methods of study (Ch 3) Parts of the compound microscope and the function of each Resolving power, total magnification, contrast, refractive index What is a bacterial stain, types of stains, use of particular types of stain. What is the use of each component in examples of each stain Bacterial shapes and arrangements Prokaryotic and Eukaryotic cells (Ch 4) Definition: capsule, slime, flagellin, axial filament, antigen, fimbriae, pili, Peptidoglycan, LPS, H and O antigen, endotoxin, protoplast and spheroplast, semipermeable, passive and active transport, group translocation, nucleoid, plasmid, subunits of ribosome, bacterial endospore, archaea. Understanding: Structure of bacterial cell wall, differences between gram + , gram -, and acid fast cell walls, structure of the plasma membrane. Fluid Mosaic Model Different means of transport across plasma membrane Major differences between the various transport mechanisms. Differences between prokaryotic and eukaryotic ribosomes. Endosymbiotic theory. Major differences between pro and eu-karyotic cells Virus (Ch 13) Definitions: Understanding: Virus, bacteriophage, capsids, capsomeres, spikes, PFU, lytic and Lyzogenic cycles, oncogenes. Properties of a virus, structure of virus, function of different structures, culture of virus, enumeration of virus, steps in bacteriophage infection and multiplication, steps in multiplication of retro- virus. Bacterial metabolism (Ch 5) What are enzymes How to name an enzyme Structure of an enzyme, apoenzyme, cofactor, coenzyme and holoenzyme, examples of coenzymes. Steps in the action of enzymes. Factors influencing enzyme action. Enzyme inhibitors, difference between competitive and noncompetitive inhibitors, mode of actions. reversible and irreversible inhibitors Know what is reduction? Oxidation? Dehydrogenation? If you are shown a chemical equation, do you know which substance is being reduced? Oxidised? What is phosphorylation? oxidative phosphorylation? Substrate level phosphorylation? Photophosphorylation? What compounds are involved in each? What are the ways of energy production in bacteria? What is glycolysis, Kerb’s cycle, electron transport chain and how energy is generated Know the ATP counts of Glycolysis, TCA cycle, etc What is the input and the end-products Differences between aerobic and anaerobic respiration, what major compounds are involved in each? What are the end products of each? What is fermentation? Products generated? ATP results. What is chemeosmosis? What is involved? What is photosynthesis, what products are generated? raw materials. What is the dark reaction? Light reactuin? What are the Bacterial growth (Ch 6) What is the effect of temperature on the growth of bacteria? What is optimal temperature? Thermophiles? Psychrophiles? Acidophiles, halophiles? What is aerobe? Anaerobe? Facultative anaerobe? What makes an aerobic bacteria able to tolerate oxygen? How is oxygen toxic to bacteria? What is a buffer? What does it do? Classification of bacteria according to their pH requirements, osmostic pressure requirements, oxygen requirements and some representative organisms discussed. Growth media, types of media, structurally and functionally; uses of each type What is complex and chemically defined media? selective medium, differential medium, selective and differential media. Examples disscussed. Method of generating anaerobic environment Classification of bacteria according to their energy and carbon source requirements. What is generation time? Bacterial growth curve Control of Bacterial Growth (Ch 7) What is bacteriostatic? Bacteriocidal? What is disinfectant VS anticeptics? What is bacterial death? Mode of action of antimicrobial substances, factors that influence antimicrobial agents Methods of control of microbial growth. Autoclave, pasteurisation, dry heat What is the effect of dryness, osmotic pressure, and radiation on the growth of microorganisms What are being used for chemical control of microbial growth? Bacterial Genetics (Ch 8) Define: DNA, gene, nucleotide, codon, anti-codon, semi-conservative DNA replication, inducible enzyme, operator, repressor, structural genes, regulating genes, mutation, plasmids, F factor, R factor, Hfr Understand: Structures of DNA and RNA, Purine and pyrimidine, DNA replication, transcription, translation, Operon theory of genetic control. Transformation, transduction, conjugation and their differences, what is involved in these processes. Effect of ionising radiation, UV radiation, types of mutation, Antimicrobial Agents (Ch 20) Definition: bacteristatic vs bactericidal; drug synergy; antibiotics resistance. Antibiotics. Antimicrobics. Broad vs Narrow spectrum antibiotics. Drug interactions. Understand: action of penicillin; difference between natural vs semisynthetic and synthetic penicillin; Possible targets of bacteristatic vs bactericidal drugs, anti-fugal vs antibacterial drugs,Which one affect human more than the other; mode of action of Erythromycin; tetracycline. Test for susceptibility of micro-organism to antibiotics Chapter 14 Definitions: antagonism, Infection, Disease, normal and transient flora, commensalisms, mutualism. Primary and secondary infection, opportunistic pathogens, synergism, disease incidence, prevalence, communicable and non-communicable disease, nosocomial infection emerging infectious diseases, bacteremia, septicemia, toxemia, epidemiology. Understanding: How normal flora protects, benefit or harm the host. Koch’s postulate and experiment, what are the exceptions to the postulate and how? Differences between sporadic, endemic, epidemic, pandemic and latent disease. Stages in the development of disease. Disease reservoirs and transmission Vehicle and vectors of disease transmission Factors affecting hospital infection and emerging infectious diseases. How are nosocomial infections transmitted? How can they be controlled Chapter 15 Definitions: toxigenicity, parenteral, LD50 and ID50, ligand and receptor, toxins, antitoxins, exotoxins, Leukocidins, hemolysins, coagulases, hyaluronidase, collagenase, endotoxin shock, septic shock, lysogenic conversion, inclusion bodies. Understanding: Portals of entry of microbes. Factors and mechanisms affecting pathogenicity; roles played by capsules, cell wall and components, enzymes. Exotoxins and endotoxins, structure of exotoxin. Cytopathic effect of virus, how it damage the host? What is the action of various enxymes secreted by microbes? How does each affect the pathogenicity of the microbe. The role of plasmids in bacterial pathogenicity. What are the different cytopathic effects caused by virus? Chapter 16 Definitions: neutrophiles, phagocytosis, plasma, formed elements, granulocytes, basophils, eosinophils, PMNs, agranulocytes, monocytes, macrophages, lymphocytes, wandering and fixed macrophages, mononuclear phagocytic system, chemotaxis opsonization, phagosome Understanding: What are the factors that prevent entrance of micro-organisms through various tissues and barriers of the host. Effect and role of normal flora in host resistance and microbial pathogenesis. Factors affecting host resistance to infection by microbes Function of basophil, macrophages, lymphocytes and other white blood cells in host resistance. Process of phagocytosis; function and working of opsonins, chemotactic factors (chemokines). Various specific defenses of the host against infection Deferences and similarities between the humoral and cell mediated immune response. Characteristics of antigens. Chapter 17 Definitions: Immunity, immunoglobulin (immune serum globulin), B cells, T cells, antigens, antibodies, antigen binding sites, haptens, plasma cells, stem cells, antigen-antibody complex, agglutination, inflammation, primary and secondary immune response, memory cells,cytokines, interleukins, APCs, CD4 and CD8 cells, activated macrophages, T dependent and T independent antigens, Understanding: Differences between Naturally acquired and artificially acquired immunity; passive and active immunity. Different classes of immunoglobulins, functions and characteristics. Difference between humoral and cell mediated immunity, difference between B and T cells. Antigens and its characteristics, elimination of antigens Bone marrow and blood cell development Kinds of B and T lymphocytes Immune response; steps in development of an immune response Structure and function of antibody Disorders of immune system. What is hypersentivity? Chapter 21 Definitions: toxic shock vesicles, carbuncles, impetigo of the newborn, syndrome, Erysipelas, Acnes, Strep throat, wart, Shingles, small pox, chicken pox, Herpes Simplex, Measles and Rubella, Mycosis, Scabies, Gonorrheal ophthalmia, Chlamydia conjunctivitis. Understand: diseases. What is the causative agent of each of the above Normal defences of the skin, Conjunctiva and mucus membrane. Characteristics of infections such as small pox, Herpes, measles; usual route of transmission, complications if any. Table 21.1 Chapter 22 Definitions: Blood brain barrier, meningitis, Encephalitis, Tetanus, Botulism, Leprosy, Poliomyelitis, Rabies. Understand: other nervous How micro-organisms gain access to the CNS and tissues, Characteristics Symptoms, and transmission of microbial infection of the nervous tissues. Table 22.2 And table 22.3 Chapter 23 Definitions: Septicemia, puerperal fever, endocarditis, rheumatic fever, tularaemia, brucellosis, Various forms of Anthrax, Gangrene, various forms of plague, lyme disease, Spotted fever, Burkitt’s lymphoma, EBV, CMV, hemorrhagic fevers, Table 23.1. • Last Modified 09/1/04 03:11