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“Soil Science”: Streptomycin and the Treatment of Tuberculosis (TB) Gabriela Farfan, Samuel Huang, Susan Huang, Joy Li, JunYao Song, Peter Vander Velden, Connie Wang, Mary Zhang Madison West High School, Madison, WI 53726 Advisor: Basudeb Bhattacharyya, University of Wisconsin, Madison, WI 53706 Mentor: Dr. Dave Nelson, University of Wisconsin, Madison, WI 53706 Bacterial Protein Translation Introduction Tuberculosis is a disease caused by the bacterium Mycobacterium tuberculosis that spreads through air and attacks the lungs. Prior to 1943, tuberculosis left untreated had a high mortality rate in the United States. Streptomycin, an antibiotic, the first cure found for tuberculosis, was isolated from the soil organism Streptomyces griseus in 1943. We are using rapid prototyping technology to model the interaction between streptomycin and the 30S bacterial ribosomal subunit of RNA. This antibiotic binds tightly to bacterial 16S rRNA, causing protein translation to be “error– prone”. As a result many defective proteins are synthesized, and the cell dies. This process does not affect human ribosomes because human ribosomes do not have the 16S rRNA. By modeling the mechanisms of this antibiotic, we hope to further understand the general mechanisms of bacterial infection and antibiotic treatment as well as antibiotic resistance. Tuberculosis affecting the lungs This process continues until a complete protein is synthesized. Streptomycin: Structure and Function Streptomycin affects the A site www.bioscience.utah.edu What is Tuberculosis? Tuberculosis (TB) is an infectious disease caused by the bacterium Mycobacterium tuberculosis. It commonly attacks the lungs, but it can also affect other parts of the body such as the nervous system or the circulatory system. Approximately one-third of the the world population is infected with M. tuberculosis, but they have a latent form of the disease that only has a 10% chance of developing into active TB. The TB bacterium is spread through inhaling infected aerosol droplets when infected persons cough or sneeze. Once it has entered the lungs, M. tuberculosis invades and replicates within alveolar macrophages. Lesions occur at the Ghon focus, typically between lobes in the lung. From the lungs, the bacillus can spread to other parts of the body through the bloodstream although it rarely affects those other parts. When a person gets an active TB infection, they do not feel well and cough up mucus or blood among other symptoms. Left untreated, TB has a 50% mortality rate. www.alanwood.net Streptomycin affects the ribosome by binding the A site where tRNA usually binds. Shown above, is an anticodon, tRNA (1), and streptomycin (2). Notice the structural similarities between streptomycin and the anticodon that allow streptomycin to fit into the http://student.ccbcmd.edu/courses/bio141/lecguide/unit2/control/imag binding site for anticodons and disrupt es/agmiscode01_illus.jpg translation. Supported by the National Institutes of Health (NIH) – National Center for Research Resources Science Education Partnership Award (NCRR-SEPA) Nelson, D. and Cox, M. (2003) Lehninger Principles of Biochemistry, Freeman Publishers, New York tRNA-AAs bind to anticodons in the peptide (P) and acceptor (A) sites. Peptides are transferred from the tRNA in the P-site to the tRNA-AA in the Asite. A new tRNA-AA enters the A site and the old original tRNA exits the E-site Streptomycin changes the conformation of the A-site of the ribosome. This causes the ribosome to be “error-prone,” leading to the synthesis of defective proteins. This leads to cell death. These pictures show TB lesions in the lung. As shown in (1), these lesions typically occur between lobes at the Ghon focus. TB is shown in an advanced stage in (2). http://gallery.unl.edu/images/75-sw/75-sw-88.gif http://www.med.yale.edu/intmed/cardio/imaging/cases/tuberculosis_hilar_ad/graphics/rad1. gif Conclusions •Streptomycin kills bacteria by compromising the ribosome. •Streptomycin is an effective antibiotic because its structure is similar to that of the anticodons that would usually bind to the ribosome. •Streptomycin is significant because it was the first antibiotic that could treat tuberculosis. •Over time, bacteria have become resistant to streptomycin. •By studying the structure of streptomycin, new antibiotics can be developed to combat diseases such as TB.