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Figure S1. Genotyping, transcript and protein levels in the ca double mutants. (a) Homozygous ca2 mutant plants were emasculated and pollinated with pollen from homozygous cal2 or cal1 mutant plants. T3 plants were grown and leaves were used to extract genomic DNA and subjected to gPCR using specific primers for both CA2 and CAL2 or CAL1 genes and T-DNA border primers (LB). Double homozygous plants were identified for ca2cal2 and ca2cal1 double mutants. (b) Transcript levels of WT and double mutant ca2cal1 plants were assessed by RT-PCR at 40 cycles using specific primers using ACTINE2 as a housekeeping gene for normalization. SYBR safe agarose gels were used to assess the presence or not of the entire CA2 and CAL1 transcripts. The ca2cal1 mutant is a double knockout. Different panels of the figures (a) and (b) come from different gels with molecular markers (M). Sizes are indicated on the right side. (c) Due to the T-DNA insertion at CAL2 locus causes a knockdown mutation, protein levels were determined by 2-D gels and Western blot analysis using a CA specific antibody (which recognizes all 5 CAs, Perales et al., 2005) in a non-lethal cal1cal2 double mutant compared to WT. Supercomplex I+III2 and complex I lines, and 20-30 kDa zone are shown. CAL1 protein (black arrow) is not detected and CAL2 protein (black arrow) level is 40% of the WT. The white arrow indicates all three CA proteins. No detectable CA2 protein in the ca2 mutant was reported (Perales et al., 2005).