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San Diego Mesa College General Biology Laboratory (Bio107L) Instructor: Elmar Schmid, Ph.D. Key topics to study in preparation for the Midterm Exam Exercise 1: Orientation – Metric System know the seven scientific basic units of the International Metric System, e.g. gram, liter, show familiarity with the sub-units, e.g. milli, micro, deci, etc., conversions be able to make conversions between subunits of the International Metric System, e.g. m into cm; mm into dm, etc. Exercise 2: Introduction to the scientific method know the purpose and steps of the scientific method know the difference between hypothesis and theory know the purpose of controls in scientific inquiry. What is a “controlled experiment”? know the difference between inductive and empirical approach in scientific inquiry rehearse the lab tools used to measure and/or transfer liquids in a lab, e.g. pipettes, graduated cylinders, volumetric flasks, etc. Celsius temperature scale. Standardized by what? Exercise 3: Windows to a microscopic world Know the difference between magnification and resolution What is the limit of resolution of the human eye? Hint: 0.1 mm know the major microscope components and especially the individual lenses by name magnification factors of the different objective lenses and of the ocular lens know how to calculate the total magnification strength of a compound light microscope, know the definition of the field of view & depth of view rehearse the hall mark features of the different cell types (animal, plant, fungi, protists, bacteria), e.g. cell wall, nucleus, organelles, size differences know the difference between prokaryotic and eukaryotic cells (size, location of DNA) know important cell organelles, size differences, the names of the used cell staining dyes (animal vs. plant cells) know the major components of important cell structures, such as cell membrane, chromosomes, and plant cell wall know the names and uses of important cell stains, e.g. Lugols’ reagent. 1 San Diego Mesa College General Biology Laboratory (Bio107L) Instructor: Elmar Schmid, Ph.D. Exercise 4: Diffusion & Osmosis know the difference between covalent, ionic and hydrogen bonds know the chemical structure and the important physical properties of water, such as adhesion, capillarity, heating capacity and pH know the difference between diffusion and osmosis and why both processes play an important in biological organisms. Be able to name examples. know which factors influence the diffusion rate and in which way. know the difference between isotonic, hypotonic and hypertonic solutions and their impact on living cells know the definition of osmosis. Be able to explain why the plasma membrane of cells is a semi-permeable structure Know which molecules can freely permeate biological membranes Rehearse the components of the diffusion tube apparatus and their functions Rehearse the meaning of osmolarity to cell volume. What happens to cells brought into solutions with different tonicities? Exercise 5: Enzymes Know what enzymes are and which role they play in living organisms? Know the name of our lab enzyme. What is the biological function of enzymes? What means catalysis? What means denaturation? Know which factors, e.g. pH, temperature, influence enzyme activity and in which way What do enzyme inhibitors do? Which types of enzyme inhibitors are known (hint: competitive versus non-competitive) What is the active site of enzymes? What happens there? What means substrate? Know the different components of a spectrophotometer and in which way we used it to measure the activity of our lab enzyme Exercise 6 & 7: Metabolic Rate & Cellular Respiration Know the net equation of cellular respiration Know the definition of metabolic rate (MR) Rehearse the found differences between the MR of a human, mouse, rat and of an amphibian, e.g. a frog, and be able to explain it Which equipment did we use to measure the MR of our lab mice and rats? 2 San Diego Mesa College General Biology Laboratory (Bio107L) Instructor: Elmar Schmid, Ph.D. Know the function of the components of the respiration chamber equipment, e.g. soda lime Know the difference between an endothermic and ectothermic life form regarding MR Know the caloric contents of major food molecules, e.g. glucose, fats, proteins, fiber and water Exercise 8: Photosynthesis Know the net equation of photosynthesis Know the carbon source for the sugars produced during photosynthesis Know the name of the pH indicator used during one important experiment in this lab Know the names of groups of life forms performing photosynthesis Know the location of chlorophyll in a plant cell Know the names and colors of the most important photosynthesis pigments Know which qualities of light is/are absorbed by chlorophyll molecules Rehearse the steps and experimental outcome of the paper chromatography technique. What does it do? How many pigments were identified? Their names and color. Understand why we used phenol red to indirectly observe the uptake of carbon dioxide by a plant cell. Rehearse the carbonate buffer system. What are stomata? What is their function in plants? Exercise 11: DNA, Gene Replication, DNA Transcription & Protein Translation What is a nucleotide? What are its components? Which nucleotides are found in DNA? Which ones in RNA? Be able to name the crucial steps, enzymes and events of DNA replication. Which enzymes are involved? Where does it take place? Be able to name the crucial steps, enzymes and events of DNA transcription. Which enzyme copies DNA into a single-stranded messenger RNA? Where does it take place? What is the name of the end product? Know where protein translation takes place and which components are necessary. (hint: ribosome, rRNA, tRNA, mRNA) Rehearse the genetic code. Know that it is a triplet code and that 3 nucleotides code for one amino acid. Be able to read the code and to predict the amino acid sequence of a given mRNA strand sequence. 3