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Biology, Section 3 Notes Date Submitted: 3/2/12 Chapter 10 Section 4 Notes Flow of Genetic Information A. Gene: segment of DNA located on a chromosome + codes for hereditary character B. Genes direct the making of proteins through an intermediate: RNA C. Transcription: DNA acts as template for RNA synthesis D. Translation: RNA directs assembly of proteins: protein synthesis aka gene expression E. DNA RNA protein RNA Structure and Function RNA is a nucleic acid but differs from DNA in 4 basic ways: RNA Sugar: ribose Nitrogenous base: uracil Single-stranded Some regions fold to form short doublestranded sections where G-C, U-A Much shorter in length than DNA B. 3 Major types of RNA DNA Sugar: deoxyribose Nitrogenous base: thymine Double-Stranded Double helix mRNA (messenger RNA) Carries instructions from a gene to make protein In eukaryotic cells, mRNA carries genetic “message” from DNA in nucleus to ribosomes in cytosol rRNA (ribosomal RNA) part of structure of ribosomes tRNA (transfer RNA) transfers amino acids to ribosome to make protein Transcription A. Transcription is the process by which genetic instructions in a specific gene are transcribed or “rewritten” into an RNA molecule B. Takes place in nucleus (eukaryotic cells) or DNA-containing region in cytoplasm (prokaryotic cells) C. Steps: a. RNA polymerase, an enzyme that catalyzes the formation of RNA on a DNA template, binds to a promoter. A promoter is a specific nucleotide sequence of DNA where RNA polymerase binds and initiates transcription. After RNA polymerase binds to promoter, DNA strands unwind and separate. b. RNA polymerase adds free RNA nucleotides that are complementary to nucleotides on one DNA strand RNA molecule. (ATCGAC on DNA UAGCUG on RNA) Transcription uses only a gene on one DNA strand to serve as template. c. As RNA polymerase moves past, separated DNA strands rewind. d. RNA polymerase reaches a termination signal, (a specific sequence of nucleotides that marks the end of a gene) RNA polymerase releases both the DNA & newly formed RNA e. Newly made RNA can perform its job in the cell, and RNA polymerase can transcribe another gene The Genetic Code A. During translation, amino acids are assembled based on instructions encoded in sequence of nucleotides in mRNA B. Genetic code = rules that relate how a sequence of nitrogenous bases corresponds to a particular amino acid a. 3 adjacent nucleotides (letters) in mRNA code for an amino acid (word) in a polypeptide b. Each 3-nucleotide sequence is called a codon c. Nearly universal to all life on Earth d. Supports idea that all organisms share an ancient common ancestor C. 64 mRNA codons & the amino acids they encode in most organisms D. Some a.a are coded for by 2+ codons that usually differ by 1 nucleotide E. No codon encodes more than one amino acid. F. AUG = start codon = methionine (specific sequence of nucleotides in mRNA that indicates where translation begins) G. UAA, UGA, UAG = stop codons (do not code for a.a, but instead signal for translation to end) Translation A. Instructions for making a protein are copied from DNA to mRNA, but all 3 types of RNA are involved in translation B. Translation = decoding of the genetic instructions to form a polypeptide C. Protein structure a. Made of 1 or more polypeptides b. Polypeptides = chains of amino acids linked by peptide bonds c. 20 diff. amino acids found in proteins of living things d. The amino acid sequence determines how the polypeptides will twist/fold into 3D structure of protein e. Shape of protein = critical to function D. Steps of Translation 1) 2 ribosomal subunits + tRNA + mRNA join together a. Enzymes attach a specific amino acid to one end of each tRNA according to genetic code b. The other end of each tRNA contains the anticodon (3 nucleotides that are complementary to sequence of codon in mRNA) c. A tRNA carrying start codon AUG at one end & anticodon UAC at other end pairs with AUG on the mRNA d. Methionine is the first amino acid in nearly all polypeptides 2) Polypeptide chain is put together a. A tRNA carrying the appropriate amino acid pairs its anticodon with the second codon in mRNA b. The ribosome detaches methionine from the first tRNA peptide bond forms between methionine and second amino acid c. First tRNA exits ribosome d. Ribosome moves a distance of 1 codon along the mRNA 3) The polypeptide chain continues to grow as mRNA moves along ribosome a. A new tRNA moves in, carrying an amino acid for the next mRNA codon b. Growing polypeptide chain moves from one tRNA to the amino acid attached to the next tRNA 4) Polypeptide grows one amino acid at a time until stop codon polypeptide falls off 5) Components of translation come apart a. The last tRNA leaves the ribosome b. Ribosome moves away from the mRNA E. B/c a new ribosome begins translating mRNA almost as soon as the preceding ribosome has moved aside, several ribosomes can translate the same mRNA simultaneously F. Prokaryotes lack a nuclear envelope separating their DNA from ribosomes in cytosol translation can begin on an mRNA even before transcription of mRNA has finished G. In eukaryotes, translation can only happen after transcription is finished The Human Genome A. B. C. D. E. F. The entire gene sequence of the humane genome (complete genetic content) is known Biologists deciphered the order of the 3.2 billion base pairs in the 23 human chromosomes New challenge: Learn what information the DNA sequences encode New field, bioinformatics, uses PCs to compare different DNA sequences Scientists use computers to predict where genes lie along the DNA Learning which gene sequences control particular biological functions may help diagnose/treat/prevent genetic disorders/cancer/infectious diseases