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Biology – DNA Protein Synthesis and Fingerprinting Spring 2009 Proteins - Review • Chains of amino acids • 20 named types • Create/build structure within organisms • Function as important biochemicals • Ex: hair, skin, tissues in organs, muscle, enzymes • Symbolize amino acids as shapes • Ex: Valine Alanine Tyrosine Etc…………………. Phenylalanine Protein Synthesis • Process by which proteins are built in cells • DNA has code for building the protein, ie. the amino acid sequence • Code? • Sequence of nitrogen bases • Problem, where are proteins built? • Ribosomes in cytoplasm • DNA “stuck” in nucleus • Who can help DNA? • RNA can travel between nucleus and cytoplasm RNA Review • • • • • • • • • • • • • • • • DNA sugar? Deoxyribose RNA sugar? Ribose DNA bases? Adenine, cytosine, guanine and thymine Base pairing? A-T and C-G RNA bases? Adenine, cytosine, guanine and uracil Base pairing? A-U and C-G DNA shape? Double helix RNA shape? Often single stranded; sometimes a weird cloverleaf shape that is partially double stranded Protein Synthesis • Goal: to make a piece of dark hair protein according to DNA base code (gene) on a chromosome in nucleus • Must assemble amino acids in correct order Assume this is the correct sequence of amino acids Step One • Begins in nucleus • Strand of DNA (gene) for dark hair • Complementary bases? Step Two • DNA uncoils • DNA unzips • Remind you of another process? • NOT DNA duplication this time Problem? • DNA (chromosome) is in nucleus • Amino acids (proteins) are assembled in the cytoplasm at the ribosome • RNA to the rescue!! Step Three • Floating in the nucleus are “spare part” RNA nucleotides made by the nucleolus Step Four • “Spare Part “ RNA nucleotides move in • Pair up with unzipped DNA on one side • Bond to form a strand of RNA Step Five • RNA strand now has the DNA code for dark hair • Detaches and leaves the nucleus • Travels to cytoplasm and ribosome • Called: messenger RNA (mRNA) • DNA zips up and coils up In cytoplasm • Steps of the process occurring in nucleus are called: Transcription = DNA passes the code to RNA • Once mRNA moves into cytoplasm, a second phase called translation begins • Translation = mRNA translates the code into a specific amino acid sequence (protein) Step Six • Floating in the cytoplasm is another type of RNA • Cloverleaf shaped with some bases bonded • 3 “free” bases on one end • Opposite ends holds a specific amino acid • Act like “semi trucks” • “Haul” amino acids to the protein factory • Called: transfer RNA (tRNA) Called: Triplet code Three bases code for one specific amino acid Each amino acid has its own specific code Some have more than one Ex: phenylalanine code can be: AAA or AAG Having 4 different nucleotide bases and having 3 bases code for one amino acid, allows for how many different combinations? Would two bases be enough to code for 20 different amino acids? tRNA Step Six Continued • tRNA haul their amino acids to ribosome • How do they know where to drop their load? • Pair up with bases on mRNA • Sequence of 3 base pairs on mRNA is called a codon • Opposite sequence of 3 on tRNA is called an anticodon Step Seven • Amino acids are so close, they bond in a chain to form a specific protein • In this case, dark hair protein • Protein is released into the cell • tRNA release from mRNA and travel back into cytoplasm to pick up another “load” (amino acid) Mutations • • • • Mutation = mistake in DNA base sequence Often harmful, sometimes positive Ex: rabbit with white coat Mutagen = agent/substance that can cause mutations • Ex: ultraviolet radiation – sunlight, nuclear radiation, chemicals in food, air, water – cigarette smoke, asbestos drugs Mutation – Impact on Protein Synthesis Mutated Gene • Assume the original DNA sequence is mutated in a gene that codes for an important protein to clot blood Normal Gene Mutated DNA gene unzips What type of mRNA will be built? Normal gene mRNA Mutant Gene mRNA Normal Gene Translation at the Ribosome Mutated Gene Translation at the Ribosome Mutated Translation Continued Normal Blood Clotting Protein Mutated Blood Clotting Protein