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ABR-Scan Science Week 35 Unit for Antibiotics and Infection Control This ABR-Scan Science is compiled by the Unit for Antibiotics and Infection Control at the Public Health Agency of Sweden. It includes a summary of links to recent articles from a selection of 17 scientific journals that we find interesting. All journals included in the scan are listed at the bottom of the document. The articles are sorted according to our categorization: surveillance, treatment and diagnosis, prevention and intervention, microbiology and other. If you have any comments or suggestions, please send an e-mail to Karin Carlin at [email protected] Surveillance Colistin- and Carbapenem-Resistant Escherichia coli Harboring mcr-1 and blaNDM-5, Causing a Complicated Urinary Tract Infection in a Patient from the United States. mBio Detection of the mcr-1 Colistin Resistance Gene in Carbapenem-Resistant Enterobacteriaceae from Different Hospitals in China. Antimicrobial Agents and Chemotherapy Coexistence of mcr-1 and blaNDM-1 in Escherichia coli from Venezuela. Antimicrobial Agents and Chemotherapy Polymyxin B Resistance in Carbapenem-Resistant Klebsiella pneumoniae, São Paulo, Brazil. Emerging Infectious Diseases Infectious Disease Expert Sees Threat From Colistin-Resistant Superbug. JAMA Superbugs, Beware. JAMA MCR-1 in multidrug-resistant and copper-tolerant clinically relevant Salmonella 1,4,[5],12:i:- and S. Rissen clones in Portugal, 2011 to 2015. Eurosurveillance Travelers Can Import Colistin-Resistant Enterobacteriaceae, Including Those Possessing the Plasmid-Mediated mcr-1 Gene. Antimicrobial Agents and Chemotherapy Spectrum of excess mortality due to carbapenem-resistant Klebsiella pneumoniae infections. Clinical Microbiology and Infection The health and economic burden of bloodstream infections caused by antimicrobialsusceptible and non-susceptible Enterobacteriaceae and Staphylococcus aureus in European hospitals, 2010 and 2011: a multicentre retrospective cohort study. Eurosurveillance Solna Folkhälsomyndigheten, SE-171 82 Solna. Visit: Nobels väg 18. Östersund Folkhälsomyndigheten, SE-831 40 Östersund. Visit: Forskarens väg 3. Telephone + 46 10 205 20 00 E-mail [email protected] www.folkhalsomyndigheten.se Page 2 (6) Lowering methodological standards for studies of multidrug-resistant bacteria is counterproductive. Clinical Microbiology and Infection New genotyping method discovers sustained nosocomial Pseudomonas aeruginosa outbreak in an intensive care burn unit. Journal of Hospital Infection Carbapenem-resistant Enterobacteriaceae colonization and infection in critically ill patients: a retrospective matched cohort comparison with non-carriers. Journal of Hospital Infection Seasonal Variation of Escherichia coli, Staphylococcus aureus, and Streptococcus pneumoniae Bacteremia According to Acquisition and Patient Characteristics: A Population-Based Study. Infection Control & Hospital Epidemiology Nosocomial Outbreak of a Novel Extended-Spectrum β-Lactamase Salmonella enterica Serotype Isangi Among Surgical Patients. Infection Control & Hospital Epidemiology Carriage of antimicrobial-resistant commensal bacteria in Dutch long-term-care facilities. Journal of Antimicrobial Chemotherapy The number of privately treated tuberculosis cases in India: an estimation from drug sales data. Lancet Infectious Diseases Community- and Healthcare-Associated Clostridium difficile Infections, Finland, 2008−2013. Emerging Infectious Diseases Difficile indeed.Editorial. Eurosurveillance Survey of Clostridium difficile infection surveillance systems in Europe, 2011. Eurosurveillance Survey of diagnostic and typing capacity for Clostridium difficile infection in Europe, 2011 and 2014. Eurosurveillance Standardised surveillance of Clostridium difficile infection in European acute care hospitals: a pilot study, 2013. Eurosurveillance Diversity of Clostridium difficile PCR ribotypes in Europe: results from the European, multicentre, prospective, biannual, point-prevalence study of Clostridium difficile infection in hospitalised patients with diarrhoea (EUCLID), 2012 and 2013. Eurosurveillance Enhanced surveillance of Clostridium difficile infection occurring outside hospital, England, 2011 to 2013. Eurosurveillance Solna Folkhälsomyndigheten, SE-171 82 Solna. Visit: Nobels väg 18. Östersund Folkhälsomyndigheten, SE-831 40 Östersund. Visit: Forskarens väg 3. Telephone + 46 10 205 20 00 E-mail [email protected] www.folkhalsomyndigheten.se Page 3 (6) Use of standardised patients to assess antibiotic dispensing for tuberculosis by pharmacies in urban India: a cross-sectional study. Lancet Infectious Diseases Over-the-counter drug distribution and tuberculosis control in India. Comment. Lancet Infectious Diseases Risk-adjusted antibiotic consumption in 34 public acute hospitals in Ireland, 2006 to 2014. Eurosurveillance Antibiotic prescribing and expenditures in outpatient adults in Greece, 2010 to 2013: evidence from real-world practice. Eurosurveillance Systematic review of antibiotic consumption in acute care hospitals. Clinical Microbiology and Infection Safety of reduced antibiotic prescribing for self limiting respiratory tract infections in primary care: cohort study using electronic health records. BMJ Antibiotics for acute respiratory tract infections in primary care. Editorial. BMJ Quality assessment of diagnosis and antibiotic treatment of infectious diseases in primary care: a systematic review of quality indicators. Scandinavian Journal of Primary Health Care Parents’ socioeconomic factors related to high antibiotic prescribing in primary health care among children aged 0–6 years in the Capital Region of Denmark. Scandinavian Journal of Primary Health Care Treatment and diagnosis Plasmid-mediated colistin resistance in a patient infected with Klebsiella pneumoniae. Correspondence. Lancet Infectious Diseases Management of Community-Acquired Pneumonia, comment and response, article 1 , article 2, article 3 and article 4. Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children. JAMA Association of RNA Biosignatures With Bacterial Infections in Febrile Infants Aged 60 Days or Younger. JAMA Genetics and the Evaluation of the Febrile Child. Editorial. JAMA Improving outcomes of severe infections by multidrug-resistant pathogens with polyclonal IgM-enriched immunoglobulins Clinical Microbiology and Infection Solna Folkhälsomyndigheten, SE-171 82 Solna. Visit: Nobels väg 18. Östersund Folkhälsomyndigheten, SE-831 40 Östersund. Visit: Forskarens väg 3. Telephone + 46 10 205 20 00 E-mail [email protected] www.folkhalsomyndigheten.se Page 4 (6) Development of a new protocol for rapid bacterial identification and susceptibility testing directly from urine samples. Clinical Microbiology and Infection Best oral empirical treatment for pyelonephritis in children: Do we need to differentiate between age and gender? Infectious Diseases Ceftazidime-avibactam Versus Doripenem for the Treatment of Complicated Urinary Tract Infections, Including Acute Pyelonephritis: RECAPTURE, a Phase 3 Randomized Trial Program. Clinical Infectious Diseases Ceftazidime-avibactam in ceftazidime-resistant infections. Correspondence. Lancet Infectious Diseases Further evidence to support the individualised treatment of gonorrhoea with ciprofloxacin. Correspondence. Lancet Infectious Diseases Successful Treatment of Bloodstream Infection Due to Metallo-β-Lactamase-Producing Stenotrophomonas maltophilia in a Renal Transplant Patient. Antimicrobial Agents and Chemotherapy Treatment of MDR urinary tract infections with oral fosfomycin: a retrospective analysis. Journal of Antimicrobial Chemotherapy Pharmacodynamics of carbapenems for the treatment of Pseudomonas aeruginosa ventilator-associated pneumonia: associations with clinical outcome and recurrence. Journal of Antimicrobial Chemotherapy Prevention and intervention Repeated nationwide point-prevalence surveys of antimicrobial use in Swedish hospitals: data for actions 2003–2010. Eurosurveillance Antimicrobial stewardship in wound care: a Position Paper from the British Society for Antimicrobial Chemotherapy and European Wound Management Association. Journal of Antimicrobial Chemotherapy Antimicrobial stewardship across 47 South African hospitals: an implementation study. Lancet Infectious Diseases Strategies of hospital antimicrobial stewardship associated with different health outcomes. Correspondence. Lancet Infectious Diseases Solna Folkhälsomyndigheten, SE-171 82 Solna. Visit: Nobels väg 18. Östersund Folkhälsomyndigheten, SE-831 40 Östersund. Visit: Forskarens väg 3. Telephone + 46 10 205 20 00 E-mail [email protected] www.folkhalsomyndigheten.se Page 5 (6) The impact of a multidisciplinary antimicrobial stewardship team on the timeliness of antimicrobial therapy in patients with positive blood cultures: a randomized controlled trial. Journal of Antimicrobial Chemotherapy Pan-genome multilocus sequence typing and outbreak-specific reference-based single nucleotide polymorphism analysis to resolve two concurrent Staphylococcus aureus outbreaks in neonatal services. Clinical Microbiology and Infection Alcohol hand rub consumption objectives in European hospitals need to be revisited. Clinical Microbiology and Infection Reduction of Healthcare-Associated Infections by Exceeding High Compliance with Hand Hygiene Practices. Emerging Infectious Diseases Emergence of community-associated methicillin-resistant Staphylococcus aureus strains in the neonatal intensive care unit: an infection prevention and patient safety challenge. Clinical Microbiology and Infection Safe water in healthcare premises. Journal of Hospital Infection Acetic acid as a decontamination method for sink drains in a nosocomial outbreak of metallo-β-lactamase-producing Pseudomonas aeruginosa. Journal of Hospital Infection Association Between High-Risk Medication Usage and Healthcare Facility-Onset C. difficile Infection. Infection Control & Hospital Epidemiology Strategies to Prevent MRSA Transmission in Community-Based Nursing Homes: A Cost Analysis. Infection Control & Hospital Epidemiology Site of infection and mortality in patients with severe sepsis or septic shock. A cohort study of patients admitted to a Danish general intensive care unit. Infectious Diseases Reemergence of Mycobacterium chimaera in Heater–Cooler Units despite Intensified Cleaning and Disinfection Protocol. Emerging Infectious Diseases Microbiology Emergence and evolution of an international cluster of MDR Bacteroides fragilis isolates. Journal of Antimicrobial Chemotherapy Other Early Antibiotic Exposure and Childhood Weight Gain. Comment. JAMA Solna Folkhälsomyndigheten, SE-171 82 Solna. Visit: Nobels väg 18. Östersund Folkhälsomyndigheten, SE-831 40 Östersund. Visit: Forskarens väg 3. Telephone + 46 10 205 20 00 E-mail [email protected] www.folkhalsomyndigheten.se Page 6 (6) Early Antibiotic Exposure and Childhood Weight Gain—Reply. JAMA New Fluoroquinolone Warning. JAMA Harmonisation in study design and outcomes in paediatric antibiotic clinical trials: a systematic review. Lancet Infectious Diseases Media Stories on NICU Outbreaks Lead to an Increased Prescription Rate of Third-Line Antibiotics in the Community of Neonatal Care. Infection Control & Hospital Epidemiology Pneumococcal infections in elderly patients attending hospital since PCV-13 authorization in Spain Infectious Diseases Pneumonia with empyema among children in the first five years of high coverage with 13valent pneumococcal conjugate vaccine. Infectious Diseases Is There Potential for Repurposing Statins as Novel Antimicrobials? Antimicrobial Agents and Chemotherapy Tuberculosis: a private and public health and data mix. Lancet Infectious Diseases Addressing resistance to antibiotics in systematic reviews of antibiotic interventions. Journal of Antimicrobial Chemotherapy The 2016 Garrod Lecture: The role of the healthcare epidemiologist in antimicrobial chemotherapy—a view from the USA. Journal of Antimicrobial Chemotherapy The publications included in the scan are: Antimicrobial Agents and Chemotherapy, British Medical Journal, Clinical Infectious Diseases, Clinical Microbiology and Infection, Emerging Infectious Diseases, Eurosurveillance, Infection Control & Hospital Epidemiology, Infectious Diseases, JAMA - The Journal of the American Medical Association, Journal of Antimicrobial Chemotherapy, Journal of Hospital Infection, Journal of Infectious Diseases, Lancet, Lancet Infectious Diseases, New England Journal of Medicine, Pediatrics and Scandinavian Journal of Primary Health Care. In addition, other articles from other publications can be included. Solna Folkhälsomyndigheten, SE-171 82 Solna. Visit: Nobels väg 18. Östersund Folkhälsomyndigheten, SE-831 40 Östersund. Visit: Forskarens väg 3. Telephone + 46 10 205 20 00 E-mail [email protected] www.folkhalsomyndigheten.se