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EXECUTIVE SUMMARY SLP LINK Projects LK0602 Bovine Genome Mapping Start date: 01/04/1996 Partners: Sponsor: End date: 31/03/1998 Roslin Institute Meat & Livestock Commission Milk Development Council Ministry of Agriculture, Fisheries & Food (now Defra) Future improvements in cattle breeding will be enhanced by a clearer understanding of the genetic control of desirable characteristics. Molecular techniques, such as the use of DNA markers can be used in combination with current selection approaches for more effective cattle breeding. Once a genetic marker for a trait of interest has been found, 1 animals carrying the marker can be easily identified (by a blood test, for example). Breeders can then select the appropriate animals for their breeding programmes. It is not the intention of this work to produce genetically modified animals. Most commercially important traits in farm animals, such as growth or milk yield, vary considerably between individuals. These highly variable (or quantitative) traits are controlled by several genes located at ‘quantitative trait loci’ (QTL). A QTL is an area of chromosome where one, or more, of the genes determining a particular trait are located. To date, little is known about the QTLs which affect commercially important characteristics. However, recent advances in molecular biology techniques, arising in part from the human genome project, will make the identification and study of QTLs possible. The Roslin Resource Herd was established with the aim of identifying QTLs affecting characteristics commonly selected for in breeding programmes. The herd comprises of three generations of cross-bred cattle. The crosses are between the most widely used dairy breed, the Holstein-Friesian, and a popular beef breed, the Charollais, which has been selected over many generations for excellent feed efficiency, conformation and lean tissue growth rate. The Roslin Resource Herd allows us to study a number of characteristics not easily measured in commercial herds such as meat and milk quality, and animal health and fertility. Assessments of these commercially important traits are made both on the farm and in the laboratory. Simple on-farm measurements include weight-for-age and feed consumption. Laboratory research involves determining meat and milk composition, and assessing the functioning of an animal’s immune system. The chromosomal region containing a QTL is located by examining whether the inheritance of a region of chromosome coincides with the inheritance of a particular trait. The Roslin Resource Herd was created to map the genes involved in a large number of traits. The herd has been bred by crossing between cattle of breeds that are different in both appearance and genetic background. The experimental herd allows a large number of detailed measurements to be made under standardised conditions. These measurements include simple on-farm measurements of daily weight gain, and milk yield, through to detailed laboratory measurements to determine, for example, meat composition and the functioning of the immune system in response to mastitis 2 pathogens. Three generations of cattle have been used in the study. Initially purebred Charollais bulls were mated with Holstein cows, to produce a first generation cross. The first generation cross bred cows were then mated either with other first generation cross bred bulls or Charollais bulls, while the first generation cross bred bulls were mated with Holstein cows. This produced a second generation of crossbred cattle that were measured for a wide range of traits. In all about 500 second generation cross bred calves have been produced. The second generation bulls were reared with their mothers as suckler calves to 6 months of age, when they were transferred to a standardised concentrate based management regime and were recorded for feed conversion efficiency, growth rate, conformation and immune response to a range of disease agents. On reaching the target 550Kg slaughter weight, the bulls were slaughtered at a commercial abattoir and carcass traits recorded. Samples were collected and analysed for composition and eating quality. Large variation was seen in all the traits measured. Preliminary analysis of feed efficiency and immune traits has shown that there is a large genetic influence on the variation between individuals. The second-generation crossbred heifers were raised as dairy calves. They were separated from their mothers at 24 hours of age, and then bucket-reared until weaning. Following weaning, they were raised on a silage based regimen and feed recorded for their first 12 months, during which time their immune response to various vaccinations, and onset of oestrus were recorded. As adults the heifers are currently being recorded for calving performance and milk production traits, including mastitis incidence and milk quality. All animals have been genotyped with a panel of DNA markers that cover all the chromosomes, which will allow the inheritance of chromosomal regions to be tracked through the generations. The juvenile data and data from the bulls is now complete and analysis is underway to correlate the trait and DNA data to localise the genes involved in the various traits. Once analysed, information on the location of genes controlling a wide range of traits will be available and will be used to aid the design of breeding 3 programmes and in the section of animals as breeding stock. The information will also serve as the starting point for identifying the genes involved. CONTACT Dr John L Williams Roslin Institute (Edinburgh) Roslin Midlothian Scotland EH25 9PS Tel: 0131 5274310 Fax: 0131 4400434 [email protected] 4