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for DNA and RNA
for DNA and RNA

... • Must be free of contaminating nucleic acids from other individuals or other species. ...
- Ms. Ottolini`s Biology Wiki!
- Ms. Ottolini`s Biology Wiki!

...  Chaperonins = barrel shaped protein molecules that help wrap polypeptides around each other to create the final 3D shape of the full protein, which determines its function  Some have molecular groups added (sugars, lipids, phosphates, etc)… a specific example is a glycoprotein, a protein with a s ...
Alternative RNA splicing in latently infected T cells generates
Alternative RNA splicing in latently infected T cells generates

... • During read-through transcription in latently infected T cell lines and primary resting CD4 T cells, chimeric cell:tat RNAs are generated by the usual cellular mechanisms of alternative RNA splicing • An IRES-like element in tat leads to translation of this mRNA in a cap-independent manner and exp ...
Mol Bio CH 14 Nov 15
Mol Bio CH 14 Nov 15

... -Eukaryotic mRNAs may have a Kozak sequence - similar function -Other (less well understood) mechanisms function for mRNAs without these sequences ...
Gene Prediction - Compgenomics2010
Gene Prediction - Compgenomics2010

U6 snRNA genes of Arabidopsis are transcribed
U6 snRNA genes of Arabidopsis are transcribed

... processing. RNA polymerase III (pol El) synthesizes tRNAs, 5S rRNA and other types of cytoplasmic and nuclear small RNAs, including U6 snRNA (reviewed in refs 1—4). Accurate initiation by either of these enzymes requires several protein factors, most * To whom correspondence should be addressed ...
Turnip yellow mosaic virus RNA can be separated into two distinct
Turnip yellow mosaic virus RNA can be separated into two distinct

... have arisen by accidental in vitro degradation of a larger RNA, as they both possess capped 5' ends. Analysis of the newly synthesized proteins resulting from translation of each RNA by a wheat germ extract shows that the 300 000 molecular weight RNA can be translated very efficiently into coat prot ...
13.2 ws B
13.2 ws B

Transcription - SCIS Teachers
Transcription - SCIS Teachers

... Environmental changes and regulation of genes  Another type of operon control involves activators, proteins that turn operons on by • binding to DNA and • making it easier for RNA polymerase to bind to the promoter. ...
Powerpoint file - revised
Powerpoint file - revised

... Therefore, transcriptional initiation is usually the major control point. Most prokaryotic genes are regulated in units called operons (Jacob and Monod, 1960) Operon: a coordinated unit of gene expression consisting of one or more related genes and the operator and promoter sequences that regulate t ...
DNA Replication/Transcription/RNA Splicing
DNA Replication/Transcription/RNA Splicing

... Sites of Ongoing Transcription The intranuclear position of many genes has been correlated with their activity state, suggesting that migration to functional subcompartments may influence gene expression. Indeed, nascent RNA production and RNA polymerase II seem to be localized into discrete foci or ...
RNA polymerase I
RNA polymerase I

... The whole process may take hours ...
The structure of RNase E at the core of the RNA
The structure of RNase E at the core of the RNA

... conserved CPxCxGxG motif that occurs throughout the RNase E/RNase G family13 (Fig. S1). A similar motif is found in the metal coordinating sites of the bacterial chaperone DnaJ (PDB entry 1EXK), where a single zinc ion is coordinated within the same subunit, rather than between two different subunit ...
BIO 208 Homework: Bacterial Genetics 2011 17.1 constitutive gene
BIO 208 Homework: Bacterial Genetics 2011 17.1 constitutive gene

... gene active in response to cellular needs. 17.3 polycistronic mRNA – coding information from more than one gene on one mRNA molecule. A number of genes may be under regulatory control of a single promoter. The mRNA is translated into the appropriate proteins. 17.4 Lactose triggers the coordinate ind ...
Increasing the vitamin E content in plants by overexpressing the γ
Increasing the vitamin E content in plants by overexpressing the γ

... Tavva VK, Kim YH, Kagan IA, Dinkins RD, Kim KH, Collins GB (2007) Increased αtocopherol content in soybean seed overexpressing the Perilla frutescens γtocopherol methyltransferase gene. Plant Cell Rep 26:61–70. ...
Exercise 1: RNA
Exercise 1: RNA

MND Australia International Research Update
MND Australia International Research Update

... top tier of what is essentially the RBP hierarchy. This group went further to test the effect of mutated forms of TDP-43 on production of its RNA targets, and found that mutant TDP-43 proteins were still able to maintain their RNA-regulating activity. What this indicates is that the levels of TDP-43 ...
Promoter Regions
Promoter Regions

... base pairs before the transcription start site) Transcription Start Site: The beginning of RNA transcription. Downstream of binding sequences. Activator: A protein that binds DNA and stabilizes the binding of transcription factors. Activator Site: The region of DNA an activator binds to. Repressor: ...
The Basics: In Vitro Translation
The Basics: In Vitro Translation

... and "coupled" systems, on the other hand, use DNA as a template. RNA is transcribed from the DNA and subsequently translated without any purification. Such systems typically combine a prokaryotic phage RNA polymerase and promoter (T7, T3, or SP6) with eukaryotic or prokaryotic extracts to synthesize ...
PowerPoint - Oregon State University
PowerPoint - Oregon State University

... Using mutation in general to disrupt gene expression causing mutant phenotype Changing gene expression in only specific cells to locate mutant phenotypes ...
Junk DNA - repetitive sequences
Junk DNA - repetitive sequences

Widespread Organ Expression of the Rat Proenkephalin Gene
Widespread Organ Expression of the Rat Proenkephalin Gene

... gene may be correlated with rapid growth or differentiation, we then assayed the organs of neonatal rats (1-2 days of age). The results demonstrated that the proenkephalin gene was more widely expressed than at the older ages (Fig. 2). In addition to neonatal brain, heart, and lung, proenkephalin mR ...
Triphosphatase Related to the Protein Tyrosine Phosphatases
Triphosphatase Related to the Protein Tyrosine Phosphatases

Lipid-like materials for low-dose, in vivo gene silencing Please share
Lipid-like materials for low-dose, in vivo gene silencing Please share

... 2001 (2), considerable effort has been directed towards their therapeutic application in humans (3). The most significant challenges to delivery include the relatively large size (∼13 kDa) and negative charge of siRNA molecules as well as their susceptibility to enzymatic degradation in vivo (4, 5). ...
The hSEP1 gene is a novel candidate tumor suppressor gene in
The hSEP1 gene is a novel candidate tumor suppressor gene in

... less environmental exposure than individuals of advanced age. To date, only a few genes such as the p53 and Rb (which are associated with cancers of diverse types) have been shown to be also associated with OGS (2,3). However, the value of these markers for diagnosis and/or prognosis of OGS remains ...
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RNA silencing

RNA silencing (associated with the concept of post-transcriptional gene silencing or RNA interference) refers to a family of gene silencing effects by which the expression of one or more genes is downregulated or entirely suppressed by non-coding RNAs, particularly small RNAs. It may also refer to the introduction of a synthetic antisense RNA molecule used in scientific experiments on gene expression. RNA silencing may also be defined as sequence-specific regulation of gene expression triggered by double-stranded RNA (dsRNA). RNA silencing mechanisms are highly conserved in most eukaryotes. The most common and well-studied example is RNA interference (RNAi), in which endogenously expressed microRNA (miRNA) or exogenously derived small interfering RNA (siRNA) induces the degradation of complementary messenger RNA. Other classes of small RNA have been identified, including piwi-interacting RNA (piRNA) and its subspecies repeat associated small interfering RNA (rasiRNA).
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