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Lineage-specific Gene Expression in the Sea
Lineage-specific Gene Expression in the Sea

... ized egg, and both genes are then expressed in all regions of the early embryo. However, in the ectoderm of pluteus-stage embryos, the pattern of expression is exactly complementary to that of CyIIIa, as their messages are located in the oral out not in the aboral ectoderm. Thus, except for CyI and ...
Transcription and Translation
Transcription and Translation

Mammalian X Chromosome Inactivation
Mammalian X Chromosome Inactivation

... Rarely do fetuses go to term. Rarely do babies survive. Symptoms include: ...
ACT - Operon -S - saddlespace.org
ACT - Operon -S - saddlespace.org

... smaller molecules in the environment? Justify your answer with specific details from Model 1 or Model 2. ...
Control of Gene Expression in Prokaryotes
Control of Gene Expression in Prokaryotes

Document
Document

... after the multiple testing correction. If there are no significant genes left after multiple testing correction, you probably have some differences, but not enough power in your experiment to detect those differences. In that case the top 10 genes are still the ones that are most likely to validate. ...
Development of the Custom AtMtDEFL Array and Robust Data
Development of the Custom AtMtDEFL Array and Robust Data

... that, when applied only to these probe sets, achieved high correlation with the expression values obtained via RMA performed on the entire ATH1 array. The Stable-Based Quantile (SBQ; [4]) method proved to be an outstanding correlation coefficient (R2 = 0.998) with RMA, even though it only includes ...
ppt - Chair of Computational Biology
ppt - Chair of Computational Biology

... transcribed RNA ...
Clustering_PartII_2012
Clustering_PartII_2012

... -- sometimes a hierarchy is not appropriate: genes can belong only to one cluster. 3) Get different clustering for different experiment sets ...
Hand out - WebLearn
Hand out - WebLearn

Lecture 8 - Instructional Web Server
Lecture 8 - Instructional Web Server

epigenetika III
epigenetika III

... splicing sites. Mouse has a second promoter that has not been found in other Xist/XIST genes analysed to date. Extensive alternative splicing of the human gene has been described yielding isoforms that lack exon 4, half of exon6, exon7 or include the last two introns. ...
to get the file - Chair of Computational Biology
to get the file - Chair of Computational Biology

- Lab Fabiana Perocchi
- Lab Fabiana Perocchi

... supplementary table I. (B) Allele-specific expression of sense–antisense transcript pairs. Scatter plot of allelic expression ratios (center panel) for sense (X-axis, log scale) versus antisense (Y-axis, log scale). Dotted blue lines show 1.5-fold expression differences. Pairs mentioned in the text ...
Mammalian X Chromosome Inactivation
Mammalian X Chromosome Inactivation

Functional Genomics Core Facility
Functional Genomics Core Facility

Document
Document

... Xist expression is controlled by Tsix, the anti-sense RNA molecule of Xist. Tsix expression is controlled by Xcite, another regulatory protein which together control both choice and count. ...
Evolution of cis-regulatory elements in duplicated genes of yeast
Evolution of cis-regulatory elements in duplicated genes of yeast

... gained but rather both genes are required to produce the full complement of functions of the ancestral gene. For the model to work, subfunctions need to be independent, hence most mutations should affect only one. Thanks to advances in molecular genetics, it has now become clear that many genes have ...
Gene Section IKZF1 (Ikaros family zinc finger 1) in Oncology and Haematology
Gene Section IKZF1 (Ikaros family zinc finger 1) in Oncology and Haematology

... Seto M. The Ikaros gene, a central regulator of lymphoid differentiation, fuses to the BCL6 gene as a result of t(3;7)(q27;p12) translocation in a patient with diffuse large Bcell lymphoma. Blood. 2000 Apr 15;95(8):2719-21 ...
Genome-scale profiling of histone H3.3 replacement patterns
Genome-scale profiling of histone H3.3 replacement patterns

... resolution3,15. Both dimethylation at Lys4 of H3 (H3K4me2) and RNA polymerase II (Pol II; using an antibody to the C-terminal domain) had patterns that corresponded closely with those of H3.3 (Fig. 2e,f). We also observed this similarity between H3.3 and markers of active chromatin and transcription ...
Assigned Study Questions Due on Monday, April 9, 2007
Assigned Study Questions Due on Monday, April 9, 2007

... A) located on different chromosomes. B) located very near to each other on the same chromosome. C) located far from each other on the same chromosome. D) both A and B E) both A and C Answer: E 20) If the recombination frequency for Y and Z was found to be 50%, this would mean that A) genes X and Y a ...
1 Transcription in eukaryotes Eukaryotic RNA polymerases
1 Transcription in eukaryotes Eukaryotic RNA polymerases

... Roles of RNA polymerases In studies RNA polymerases were used to transcribe various genes. Purified polymerases were shown to transcribe certain genes, but not others in vitro. RNA polymerase I – makes rRNA RNA polymerase II – makes heterogeneous nuclear RNA (hnRNAs) and small nuclear RNA (snRNAs) ...
EV0449 ePoster Viewing Resistance mechanisms
EV0449 ePoster Viewing Resistance mechanisms

... caused important hospital outbreaks worldwide. Most outbreaks are produced by singlecarbapenemase producers, but Klebsiella pneumoniae co-producing two different carbapenemases have been observed. During the last five years OXA-48-producing K. pneumoniae have spread in Spain. This expansion has been ...
The Big Picture: an outline of the concepts covered to date
The Big Picture: an outline of the concepts covered to date

Homeobox genes
Homeobox genes

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Long non-coding RNA

Long non-coding RNAs (long ncRNAs, lncRNA) are non-protein coding transcripts longer than 200 nucleotides. This somewhat arbitrary limit distinguishes long ncRNAs from small regulatory RNAs such as microRNAs (miRNAs), short interfering RNAs (siRNAs), Piwi-interacting RNAs (piRNAs), small nucleolar RNAs (snoRNAs), and other short RNAs.
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