Arabidopsis
... via root wounds or sites of secondary root emergence (Genin 2010). The bacteria spread toward the xylem vessels and colonize the root cortex and vascular parenchyma (Turner et al. 2009). R. solanacearum secretes copious amounts of extracellular products, resulting in cell damage. The accumulation of ...
... via root wounds or sites of secondary root emergence (Genin 2010). The bacteria spread toward the xylem vessels and colonize the root cortex and vascular parenchyma (Turner et al. 2009). R. solanacearum secretes copious amounts of extracellular products, resulting in cell damage. The accumulation of ...
New variants of the tet(M) gene in Clostridium
... Sequence analysis revealed that except for tet(M)1, which was 100% identical to the tet(M) gene found in Streptococcus agalactiae 2603V/R (GenBank accession no. AE014233), the other alleles did not show complete identity with other tet(M) genes. The phylogenetic tree obtained by nucleotide sequence ...
... Sequence analysis revealed that except for tet(M)1, which was 100% identical to the tet(M) gene found in Streptococcus agalactiae 2603V/R (GenBank accession no. AE014233), the other alleles did not show complete identity with other tet(M) genes. The phylogenetic tree obtained by nucleotide sequence ...
genetics, experience, and host-plant preference in eurosta
... ratio in host preference in the backcross to the host race with the allele for recessive preference; and (3) a 3:1 ratio in host preference in the F2s. The polygenic autosomal gene hypothesis is that multiple autosomal loci influence host preference. Polygenic inheritance of preference could produce ...
... ratio in host preference in the backcross to the host race with the allele for recessive preference; and (3) a 3:1 ratio in host preference in the F2s. The polygenic autosomal gene hypothesis is that multiple autosomal loci influence host preference. Polygenic inheritance of preference could produce ...
genetics - Liceocopernico.it
... of his pioneering work on peas in 1866, but his work was not appreciated during his lifetime. The science of genetics began in 1900 with the rediscovery of his original paper. In the next ninety years, genetics grew from virtually zero knowledge to the present day ability to exchange genetic materia ...
... of his pioneering work on peas in 1866, but his work was not appreciated during his lifetime. The science of genetics began in 1900 with the rediscovery of his original paper. In the next ninety years, genetics grew from virtually zero knowledge to the present day ability to exchange genetic materia ...
Gene Section USP1 (ubiquitin specific peptidase 1) Atlas of Genetics and Cytogenetics
... USP1 is somewhat controversial, since two binding motifs have been proposed based on different experimental approaches. Villamil and co-workers proposed that the UAF1 binding region comprised residues 235-408 (Villamil et al., 2012b), but García-Santisteban et al. described that the binding motif wa ...
... USP1 is somewhat controversial, since two binding motifs have been proposed based on different experimental approaches. Villamil and co-workers proposed that the UAF1 binding region comprised residues 235-408 (Villamil et al., 2012b), but García-Santisteban et al. described that the binding motif wa ...
SURVEY AND SUMMARY New insights into Hoogsteen base pairs
... To examine the impact of HG bps on the local DNA structure, we constructed 1D histogram distributions for local structural parameters (including sugar-phosphodiester torsion angles, local base-pair parameters, C1 –C1 distances and heavy atom distances in H-bonds) for the ‘nonredundant HG’, ‘adjace ...
... To examine the impact of HG bps on the local DNA structure, we constructed 1D histogram distributions for local structural parameters (including sugar-phosphodiester torsion angles, local base-pair parameters, C1 –C1 distances and heavy atom distances in H-bonds) for the ‘nonredundant HG’, ‘adjace ...
Optimization and the Robustness of BOX A1R PCR for DNA
... targets naturally occurring, multi-copied, conserved, repetitive, DNA sequences present in the genomes of most gram-negative and gram-positive bacteria (20). The idea of using this primer is to amplify specific genomic regions located between BOX elements (154bp) and its natural inverted repeats (2) ...
... targets naturally occurring, multi-copied, conserved, repetitive, DNA sequences present in the genomes of most gram-negative and gram-positive bacteria (20). The idea of using this primer is to amplify specific genomic regions located between BOX elements (154bp) and its natural inverted repeats (2) ...
Technical standards and guidelines for spinal muscular atrophy testing
... affected patients, whereas the remaining patients have nonsense, frameshift, or missense mutations within the gene.16 Based on Hardy-Weinberg equilibrium, the remaining patients (with the smaller types of mutations) are virtually all assumed to be hemizygous for the SMN1 deletion. The absence of SMN ...
... affected patients, whereas the remaining patients have nonsense, frameshift, or missense mutations within the gene.16 Based on Hardy-Weinberg equilibrium, the remaining patients (with the smaller types of mutations) are virtually all assumed to be hemizygous for the SMN1 deletion. The absence of SMN ...
Activation of the Interleukin-3 Gene by Chromosome
... Since the IL-3 immunoassay measured only immunoreactive factor, we confimed that biologically active IL-3 was present by using the TF-1 bioassay. This bioassay can be rendered monospecific using appropriate neutralizing monoclonal antibodies specific for IL-3, IL-5, or GM-CSF. We observed that sera ...
... Since the IL-3 immunoassay measured only immunoreactive factor, we confimed that biologically active IL-3 was present by using the TF-1 bioassay. This bioassay can be rendered monospecific using appropriate neutralizing monoclonal antibodies specific for IL-3, IL-5, or GM-CSF. We observed that sera ...
20.4 RNA polymerase I has a bipartite promoter
... Accessory factors are needed for initiation, but are not required subsequently. In each case, the factors, rather than the enzymes themselves, are principally responsible for recognizing the promoter. This is different from bacterial RNA polymerase, where it is the enzyme that recognizes the promote ...
... Accessory factors are needed for initiation, but are not required subsequently. In each case, the factors, rather than the enzymes themselves, are principally responsible for recognizing the promoter. This is different from bacterial RNA polymerase, where it is the enzyme that recognizes the promote ...
Wheat biotechnology: A minireview
... minimize crop loss due to unfavourable environmental conditions, and attack by various pests and pathogens. In the early 60’s, conventional breeding coupled with improved farm management practices led to a significant increase in world wheat production thereby ushering in the green revolution. Subse ...
... minimize crop loss due to unfavourable environmental conditions, and attack by various pests and pathogens. In the early 60’s, conventional breeding coupled with improved farm management practices led to a significant increase in world wheat production thereby ushering in the green revolution. Subse ...
org.Mm.eg.db
... Each entrez gene identifier maps to a named vector containing the EC number that corresponds to the enzyme produced by that gene. The name corresponds to the entrez gene identifier. If this information is unknown, the vector will contain an NA. Enzyme Commission numbers are assigned by the Nomenclat ...
... Each entrez gene identifier maps to a named vector containing the EC number that corresponds to the enzyme produced by that gene. The name corresponds to the entrez gene identifier. If this information is unknown, the vector will contain an NA. Enzyme Commission numbers are assigned by the Nomenclat ...
Single-Nucleotide Polymorphism Mapping
... interactions. Second, SNPs between N2 and CB4856 are very dense. The average density is approximately one per kilobase of DNA (3), and to date more than 15,000 SNPs have been identified. Thus, SNP mapping can provide data on very small intervals, and in some cases is capable of mapping to single-gen ...
... interactions. Second, SNPs between N2 and CB4856 are very dense. The average density is approximately one per kilobase of DNA (3), and to date more than 15,000 SNPs have been identified. Thus, SNP mapping can provide data on very small intervals, and in some cases is capable of mapping to single-gen ...
Effect of the Polymorphisms of Keratin Associated Protein 8.2 Gene
... ABSTRACT : The aim of the experiment was to detect polymorphisms in the keratin-associated protein 8.2 (KAP8.2) gene to determine associations between the genotype and fibre traits in Chinese Inner Mongolia cashmere goats. The fibre traits data investigated were cashmere fibre diameter, combed cashm ...
... ABSTRACT : The aim of the experiment was to detect polymorphisms in the keratin-associated protein 8.2 (KAP8.2) gene to determine associations between the genotype and fibre traits in Chinese Inner Mongolia cashmere goats. The fibre traits data investigated were cashmere fibre diameter, combed cashm ...
Formosa haliotis sp. nov., a brown-alga
... % G+C content being 36 mol%. For every DNA pair, reciprocal reactions (e.g. A6B and B6A) were carried out, and the variation observed between them was generally within the limits of this method (mean variation of ¡7 %). The experiments were performed in quadruplicate and repeated twice. Per DNA pair ...
... % G+C content being 36 mol%. For every DNA pair, reciprocal reactions (e.g. A6B and B6A) were carried out, and the variation observed between them was generally within the limits of this method (mean variation of ¡7 %). The experiments were performed in quadruplicate and repeated twice. Per DNA pair ...
The enhancement of ribosomal transcription by the recycling of RNA
... pre-ribosomal RNA, (40S pre-rRNA), but continues through the sequences lying downstream of the 28S gene, (7,8). The transcription is eventually terminated just 213 b.p. upstream of the pre-rRNA promoter for the following gene unit in the tandem gene array, site "T" in fig. 1, i.e. the same site at w ...
... pre-ribosomal RNA, (40S pre-rRNA), but continues through the sequences lying downstream of the 28S gene, (7,8). The transcription is eventually terminated just 213 b.p. upstream of the pre-rRNA promoter for the following gene unit in the tandem gene array, site "T" in fig. 1, i.e. the same site at w ...
CC 1 070-71..8171c ose chapter .. Page70
... potential application of triplex forming oligonucleotides (TFOs) as therapeutic agents, for applications such as intracellular gene targeting, and as rational chemical solutions to sequence specific recognition of a DNA duplex.1,3 A popular strategy to improve triplex stability involves the use of i ...
... potential application of triplex forming oligonucleotides (TFOs) as therapeutic agents, for applications such as intracellular gene targeting, and as rational chemical solutions to sequence specific recognition of a DNA duplex.1,3 A popular strategy to improve triplex stability involves the use of i ...
... ABL/BCR may or may not be expressed; breakpoint in ABL is variable over a region of 200 kb, often between the two alternative exons 1b and 1a, sometimes 5’ of 1b or 3’ of 1a, but always 5’ of exon 2; breakpoint in BCR is either: 1- in a region called M-bcr (for major breakpoint cluster region), a cl ...
Gene Ontology (GO) Tutorial
... Occasionally, one will come across gene products that have been annotated to Process, Function, and/or Component Unknown. These three terms are used when a curator has looked over the available literature and has found that none of it is adequate to assign a term. A good example is Dab2ip. As shown ...
... Occasionally, one will come across gene products that have been annotated to Process, Function, and/or Component Unknown. These three terms are used when a curator has looked over the available literature and has found that none of it is adequate to assign a term. A good example is Dab2ip. As shown ...
- Zurich Open Repository and Archive
... metal-chelating substance, respectively. Loss of the green color occurs during the subsequent opening of the porphyrin macrocycle of pheophorbide (pheide) a by the coupled action of pheide a oxygenase (PAO) and red chl catabolite reductase (RCCR). This yields a primary fluorescent catabolite (pFCC), ...
... metal-chelating substance, respectively. Loss of the green color occurs during the subsequent opening of the porphyrin macrocycle of pheophorbide (pheide) a by the coupled action of pheide a oxygenase (PAO) and red chl catabolite reductase (RCCR). This yields a primary fluorescent catabolite (pFCC), ...
Supplementary Figure Legends (doc 34K)
... harbour a complete or partial deletion of the NF1 locus as confirmed by real-time PCR-based gene dosage. Custom high resolution array-CGH enables the accurate characterization of the deletion type. NF1 complete and large partial deletions were observed in 4.2% and 0.5% of NF1 patients in the French ...
... harbour a complete or partial deletion of the NF1 locus as confirmed by real-time PCR-based gene dosage. Custom high resolution array-CGH enables the accurate characterization of the deletion type. NF1 complete and large partial deletions were observed in 4.2% and 0.5% of NF1 patients in the French ...
Distribution of orphan metabolic activities
... characterized, enzymatic reactions have yet to be assigned EC numbers [14]. The addition of these, currently unclassified, reactions is likely to increase significantly the fraction of orphan activities. For example, we identified 1289 reactions in the KEGG [34] database and 1439 reactions in the Me ...
... characterized, enzymatic reactions have yet to be assigned EC numbers [14]. The addition of these, currently unclassified, reactions is likely to increase significantly the fraction of orphan activities. For example, we identified 1289 reactions in the KEGG [34] database and 1439 reactions in the Me ...
Design-O-Saur - Beyond Benign
... Decode provided information to build a genetically unique dinosaur. Understand that this is a model that could be used to look at human genetics Understand gene sequences and the results of these sequences Materials: Clay – model magic works very well Student sheets Time needed: 1 x 45-60 ...
... Decode provided information to build a genetically unique dinosaur. Understand that this is a model that could be used to look at human genetics Understand gene sequences and the results of these sequences Materials: Clay – model magic works very well Student sheets Time needed: 1 x 45-60 ...
Genotype C of hepatitis B virus can be classified into at least two
... detected in Asia could be classified into at least two subgroups, which we named HBV/C1 and HBV/C2. Notably, HBV/C1 was found only in southeast Asia including Vietnam, Myanmar and Thailand, while HBV/C2 was found in Far East Asia including Japan, Korea and China. By means of phylogenetic analysis in ...
... detected in Asia could be classified into at least two subgroups, which we named HBV/C1 and HBV/C2. Notably, HBV/C1 was found only in southeast Asia including Vietnam, Myanmar and Thailand, while HBV/C2 was found in Far East Asia including Japan, Korea and China. By means of phylogenetic analysis in ...
1. INTRODUCTION TO BIOLOGY AND BIOINFORMATICS
... To identify an unknown gene of interest Sequence matching Is there a match to known sequence in the database Which protein family does it match to How to identify more family members I have an similar structure, how to identify its potential ligands How to identify if my gene/protein i ...
... To identify an unknown gene of interest Sequence matching Is there a match to known sequence in the database Which protein family does it match to How to identify more family members I have an similar structure, how to identify its potential ligands How to identify if my gene/protein i ...