A wide-range phylogenetic analysis of Zic proteins: Implications for
... Jun Aruga a,⁎, Akiko Kamiya a , Hirokazu Takahashi a , Takahiko J. Fujimi a , Yuri Shimizu a , Keiko Ohkawa a , Shigenobu Yazawa b,c , Yoshihiko Umesono b,c , Hideki Noguchi d , ...
... Jun Aruga a,⁎, Akiko Kamiya a , Hirokazu Takahashi a , Takahiko J. Fujimi a , Yuri Shimizu a , Keiko Ohkawa a , Shigenobu Yazawa b,c , Yoshihiko Umesono b,c , Hideki Noguchi d , ...
Molecular Characterization of a Powdery Mildew Resistance Gene
... Wheat powdery mildew, caused by the obligate biotrophic parasitic fungus Blumeria graminis (DC) E.O. Speer f. sp. tritici, is an important foliar disease of wheat worldwide and is promulgated by the heavy use of high-yielding semidwarf cultivars, irrigation, and nitrogen fertilizer (1). Resistance t ...
... Wheat powdery mildew, caused by the obligate biotrophic parasitic fungus Blumeria graminis (DC) E.O. Speer f. sp. tritici, is an important foliar disease of wheat worldwide and is promulgated by the heavy use of high-yielding semidwarf cultivars, irrigation, and nitrogen fertilizer (1). Resistance t ...
Etiology : cytogenetics and microdeletions - HAL
... Roessler and others 1996], ZIC2 (13q32) (HPE5) [Brown and others 2001; Brown and others 1998], SIX3 (2p21) (HPE2) [Gripp and others 2000; Pasquier and others 2000; Wallis and others 1999], and TGIF (18p11.3) (HPE4) [Aguilella and others 2003; Gripp and others 2000]. These genes have since constitute ...
... Roessler and others 1996], ZIC2 (13q32) (HPE5) [Brown and others 2001; Brown and others 1998], SIX3 (2p21) (HPE2) [Gripp and others 2000; Pasquier and others 2000; Wallis and others 1999], and TGIF (18p11.3) (HPE4) [Aguilella and others 2003; Gripp and others 2000]. These genes have since constitute ...
Article Positive and Purifying Selection on the Drosophila Y
... content is perhaps surprising given the largely heterochromatic state of the Y and its lack of recombination, and yet it is clear that genes have moved to and from the Y at an appreciable rate. This turnover appears to be dominated by gene gains (Koerich et al. 2008) and as a consequence, most of th ...
... content is perhaps surprising given the largely heterochromatic state of the Y and its lack of recombination, and yet it is clear that genes have moved to and from the Y at an appreciable rate. This turnover appears to be dominated by gene gains (Koerich et al. 2008) and as a consequence, most of th ...
Package 'MatrixEQTL'
... Associations significant at pvOutputThreshold (pvOutputThreshold.cis) levels are saved to output_file_name (output_file_name.cis), with corresponding estimates of effect size (slope coefficient), test statistics, p-values, and q-values (false discovery rate). Matrix eQTL can perform separate analysi ...
... Associations significant at pvOutputThreshold (pvOutputThreshold.cis) levels are saved to output_file_name (output_file_name.cis), with corresponding estimates of effect size (slope coefficient), test statistics, p-values, and q-values (false discovery rate). Matrix eQTL can perform separate analysi ...
Evolution and selection of trichromatic vision in primates
... primates evolved to detect ripe fruit on a dappled background of leaves [1,2]. In the past few years however, this has been challenged by the idea that foraging for young leaves, which are often red in colour, explains such adaptive variation [3,4]. A recent finding indicates that primate colour vis ...
... primates evolved to detect ripe fruit on a dappled background of leaves [1,2]. In the past few years however, this has been challenged by the idea that foraging for young leaves, which are often red in colour, explains such adaptive variation [3,4]. A recent finding indicates that primate colour vis ...
Analysis of acid-induced asr gene promoter of Enterobacteriaceae
... (Fig. 1, lane 6 vs. 4), indicating that it contains no elements of asr transcription control. However, deletions close to the –60 position significantly decreased the activity of asr promoter (Fig. 1, lanes 7, 8, 9, 10, 11, 12). Notably, even the deletion of C at –60 position (p∆1) resulted in a 6-f ...
... (Fig. 1, lane 6 vs. 4), indicating that it contains no elements of asr transcription control. However, deletions close to the –60 position significantly decreased the activity of asr promoter (Fig. 1, lanes 7, 8, 9, 10, 11, 12). Notably, even the deletion of C at –60 position (p∆1) resulted in a 6-f ...
Genome-wide scan of bipolar disorder in 65 pedigrees: supportive evidence for linkage at 8q24, 18q22, 4q32, 2p12, and 13q12.
... phenotypes included BPI, BPII, RUP, and SAM. The ascertainment protocol sought families that were unilineal (ie the affected phenotype apparently segregated through only one parent). After ascertainment, families were excluded only if the genotype data were inconsistent with the pedigree structure ( ...
... phenotypes included BPI, BPII, RUP, and SAM. The ascertainment protocol sought families that were unilineal (ie the affected phenotype apparently segregated through only one parent). After ascertainment, families were excluded only if the genotype data were inconsistent with the pedigree structure ( ...
Massive Changes in Genome Architecture Accompany
... A strains used in this study. On the basis of sequence divergence between these genes, the authors predicted the existence of two evolutionary strata: one large pericentric region encompassing most of the chromosome and another much smaller region distal to the mat locus. In two other studies, Menki ...
... A strains used in this study. On the basis of sequence divergence between these genes, the authors predicted the existence of two evolutionary strata: one large pericentric region encompassing most of the chromosome and another much smaller region distal to the mat locus. In two other studies, Menki ...
and GvpD-mediated transcription regulation of the p
... 1996). The functions of most of the Gvp proteins encoded by p-gvpFGHIJKLM have not yet been determined, but they are required for gas-vesicle formation, presumably as accessory or minor structural gas-vesicle proteins (Offner et al., 2000). ...
... 1996). The functions of most of the Gvp proteins encoded by p-gvpFGHIJKLM have not yet been determined, but they are required for gas-vesicle formation, presumably as accessory or minor structural gas-vesicle proteins (Offner et al., 2000). ...
Introduction to GO Annotation
... 2. Computational analyses - Phylogenetic analysis – function (ISS) - Domain analysis 3. Review articles - TAS evidence ...
... 2. Computational analyses - Phylogenetic analysis – function (ISS) - Domain analysis 3. Review articles - TAS evidence ...
A family of human Y chromosomes has dispersed throughout
... The human Y chromosome is replete with amplicons—very large, nearly identical repeats—which render it susceptible to interstitial deletions that often cause spermatogenic failure. Here we describe a recurrent, 1.8-Mb deletion that removes half of the azoospermia factor c (AZFc) region, including 12 ...
... The human Y chromosome is replete with amplicons—very large, nearly identical repeats—which render it susceptible to interstitial deletions that often cause spermatogenic failure. Here we describe a recurrent, 1.8-Mb deletion that removes half of the azoospermia factor c (AZFc) region, including 12 ...
Chlamydia trachomatis RNA polymerase major sigma subunit
... noted, both clinically and in tissue culture, although the mechanism by which this occurs is unknown (4). Several gene products that are temporally regulated and associated with RB:EB differentiation have been characterized. We have previously shown that differential transcription of the chlamydial ...
... noted, both clinically and in tissue culture, although the mechanism by which this occurs is unknown (4). Several gene products that are temporally regulated and associated with RB:EB differentiation have been characterized. We have previously shown that differential transcription of the chlamydial ...
PERSPECTIVES IN HUMAN GENETICS Mendelian Inheritance in
... somatic cell hybridization made it possible to map genes to specific human chromosomes without the existence of a Mendelizing phenotype that could be used in family linkage studies. The difference between the genomes of the two species in the hybrid substituted for the differences between the genome ...
... somatic cell hybridization made it possible to map genes to specific human chromosomes without the existence of a Mendelizing phenotype that could be used in family linkage studies. The difference between the genomes of the two species in the hybrid substituted for the differences between the genome ...
Alu repeat analysis in the complete human genome: trends and
... 1989). Initial analysis of the first draft of human genome also revealed their association with gene and GC regions of the genome (Lander et al., 2001). It has also been reported that these elements are unevenly distributed and there is a positive correlation between exons and Alus in human chromoso ...
... 1989). Initial analysis of the first draft of human genome also revealed their association with gene and GC regions of the genome (Lander et al., 2001). It has also been reported that these elements are unevenly distributed and there is a positive correlation between exons and Alus in human chromoso ...
Different strategies of osmoadaptation in the closely
... 1985) and later on in many bacterial species (Severin et al., 1992; Roberts, 2005). The derivative hydroxyectoine was first discovered in Streptomyces parvalus (Inbar & Lapidot, 1988), before its presence was proven in a wide range of bacteria, and recently also in Archaea (Widderich et al., 2015). ...
... 1985) and later on in many bacterial species (Severin et al., 1992; Roberts, 2005). The derivative hydroxyectoine was first discovered in Streptomyces parvalus (Inbar & Lapidot, 1988), before its presence was proven in a wide range of bacteria, and recently also in Archaea (Widderich et al., 2015). ...
Word 76 KB - Office of the Gene Technology Regulator
... applications. The purpose of this Communiqué is to provide a brief overview of GTTAC’s consideration of applications and RARMPs and, in accordance with the Gene Technology Regulations 2001 (the Regulations), to publish Committee resolutions given to the Regulator. The Communiqué also provides an ove ...
... applications. The purpose of this Communiqué is to provide a brief overview of GTTAC’s consideration of applications and RARMPs and, in accordance with the Gene Technology Regulations 2001 (the Regulations), to publish Committee resolutions given to the Regulator. The Communiqué also provides an ove ...
Point Mutation Analysis of PMP22 in Patients Referred for Hereditary
... Autosomal dominant inheritance of HNPP was first shown in 1954 [4], and the relevant gene was finally identified when two groups showed that a deletion of the entire PMP22 gene resulted in the condition [7] [8], due to unequal crossing over between homologous low copy repeats on chromosomes 17 [9]. ...
... Autosomal dominant inheritance of HNPP was first shown in 1954 [4], and the relevant gene was finally identified when two groups showed that a deletion of the entire PMP22 gene resulted in the condition [7] [8], due to unequal crossing over between homologous low copy repeats on chromosomes 17 [9]. ...
Gene Section ALK (anaplastic lymphoma kinase) Atlas of Genetics and Cytogenetics
... Hidden translocation is frequently found; either t(X;2)(q11;p23), or t(1;2)(q25;p23), or inv(2)(p23q35), or t(2;3)(p23;q21), or t(2;22)(p23;q11.2). Hybrid/Mutated gene 5' MSN, TPM3, ATIC, TFG, or CLTCL1 - 3' ALK. Abnormal protein N-term amino acids from the partner gene fused to the 562 C-term amino ...
... Hidden translocation is frequently found; either t(X;2)(q11;p23), or t(1;2)(q25;p23), or inv(2)(p23q35), or t(2;3)(p23;q21), or t(2;22)(p23;q11.2). Hybrid/Mutated gene 5' MSN, TPM3, ATIC, TFG, or CLTCL1 - 3' ALK. Abnormal protein N-term amino acids from the partner gene fused to the 562 C-term amino ...
Rhizopus Raw-Starch-Degrading Glucoamylase: Its
... enzymeshave been isolated from the culture fluid of a variety of fungi and yeasts, and their ...
... enzymeshave been isolated from the culture fluid of a variety of fungi and yeasts, and their ...
1 Are the Eyes Homologous?
... circuits. This is the current challenge in computational biology. As genomes are sequenced, there comes the realization that interpreting the genome sequence is not straightforward. Coding regions are interspersed with noncoding regions, and an individual locus may give rise to multiple gene product ...
... circuits. This is the current challenge in computational biology. As genomes are sequenced, there comes the realization that interpreting the genome sequence is not straightforward. Coding regions are interspersed with noncoding regions, and an individual locus may give rise to multiple gene product ...
Extrapolation to the whole human genome
... notable differences in the pseudogene density and the gene density (either processed and non-processed), where they are observed for both the GenomeScan genes and the Riken/Sanger complete sets of gene annotations. We find that the most notable increased density for both processed and non-processed ...
... notable differences in the pseudogene density and the gene density (either processed and non-processed), where they are observed for both the GenomeScan genes and the Riken/Sanger complete sets of gene annotations. We find that the most notable increased density for both processed and non-processed ...
- Wiley Online Library
... products were similar to the active a-ketoglutarate dehydrogenase subunits of heterotrophs. These obligate species are thus genomically competent with respect to this enzyme but are apparently incapable of producing a functional enzyme. Probing of the full and incomplete genomes of some cyanobacteri ...
... products were similar to the active a-ketoglutarate dehydrogenase subunits of heterotrophs. These obligate species are thus genomically competent with respect to this enzyme but are apparently incapable of producing a functional enzyme. Probing of the full and incomplete genomes of some cyanobacteri ...
Comparison of Sample Sequences of the Genome to the Sequence K-12
... less significant than 1e25, a level at which the significance of any alignments are unreliable. These entirely novel sequences of no known function which occur in S. typhi but not E. coli K-12 presumably include some genes encoding novel functions. Three-way comparisons. Pairwise comparisons of Blas ...
... less significant than 1e25, a level at which the significance of any alignments are unreliable. These entirely novel sequences of no known function which occur in S. typhi but not E. coli K-12 presumably include some genes encoding novel functions. Three-way comparisons. Pairwise comparisons of Blas ...