RT2 Profiler™ PCR Arrays: Pathway
... of each primer set is measured against the entire human, mouse, or rat genome to prevent the amplification of sequence-related, non-specific secondary products. The primer specificity is also checked against the E. coli genome to assure that the primers do not amplify bacterial genomic DNA, a common bu ...
... of each primer set is measured against the entire human, mouse, or rat genome to prevent the amplification of sequence-related, non-specific secondary products. The primer specificity is also checked against the E. coli genome to assure that the primers do not amplify bacterial genomic DNA, a common bu ...
Information Encoding in Biological Molecules: DNA and
... sequence is an annotation (exon, promoter, transposable element, regulatory region, CpG island) ...
... sequence is an annotation (exon, promoter, transposable element, regulatory region, CpG island) ...
Gene conversion rapidly generates major histocompatibility complex
... Berthelot’s pipit (Anthus berthelotii) is a passerine bird endemic to 13 island populations in three North Atlantic archipelagos (Fig. S1, Supporting information). A previous study revealed that this species has extremely low levels of genetic variation, with just one and four haplotypes at the mito ...
... Berthelot’s pipit (Anthus berthelotii) is a passerine bird endemic to 13 island populations in three North Atlantic archipelagos (Fig. S1, Supporting information). A previous study revealed that this species has extremely low levels of genetic variation, with just one and four haplotypes at the mito ...
Targeted gene expression as a means of altering cell fates and
... lines. Thus, a library of different activator-expressing lines can direct each new target gene to be expressed in numerous distinct patterns. A first step is to generate lines expressing a transcriptional activator in a variety of patterns. It is necessary to use a transcriptional activator that has ...
... lines. Thus, a library of different activator-expressing lines can direct each new target gene to be expressed in numerous distinct patterns. A first step is to generate lines expressing a transcriptional activator in a variety of patterns. It is necessary to use a transcriptional activator that has ...
H4K20me1 Contributes to Downregulation of X
... In C. elegans, dosage compensation downregulates genes on the X chromosome. We therefore examined the pattern of H4K20me1 with respect to gene features. As seen previously in early embryos and L3 larvae [15], H4K20me1 is enriched across active gene regions at all developmental stages examined, with ...
... In C. elegans, dosage compensation downregulates genes on the X chromosome. We therefore examined the pattern of H4K20me1 with respect to gene features. As seen previously in early embryos and L3 larvae [15], H4K20me1 is enriched across active gene regions at all developmental stages examined, with ...
Genetic Analysis of HNF4A Polymorphisms in Caucasian
... alternative splicing of these exons results in at least nine isoforms of the gene. The transcription of three of these isoforms is driven by an alternate promoter known as P2, which is located ⬃45.5 kb upstream of the P1 promoter (11,12). Recent studies suggest that although both promoters function ...
... alternative splicing of these exons results in at least nine isoforms of the gene. The transcription of three of these isoforms is driven by an alternate promoter known as P2, which is located ⬃45.5 kb upstream of the P1 promoter (11,12). Recent studies suggest that although both promoters function ...
Targeting gene expression to cones with human cone opsin
... Figure 4 Fluorescence images showing targeted green fluorescent protein (GFP) gene expression in cones. Refer to Table 1 for specific details. (a–c) 3LCR-PR0.5-GFP (dog M571, left eye, 4 weeks post-subretinal vector administration). (a) Native GFP expression visualized by excitation with blue light. ...
... Figure 4 Fluorescence images showing targeted green fluorescent protein (GFP) gene expression in cones. Refer to Table 1 for specific details. (a–c) 3LCR-PR0.5-GFP (dog M571, left eye, 4 weeks post-subretinal vector administration). (a) Native GFP expression visualized by excitation with blue light. ...
Contribution of IKBKE and IFIH1 gene variants to SLE susceptibility
... Figure 1. The IKBKE SNV rs12142086 affects the binding of SF1 with DNA. (a) The SNV rs12142086 is predicted to be located in the binding motif of SF1. Introns are represented by grey horizontal lines and exons by vertical bars with numbers. The position of rs12142086 is highlighted with a star. In t ...
... Figure 1. The IKBKE SNV rs12142086 affects the binding of SF1 with DNA. (a) The SNV rs12142086 is predicted to be located in the binding motif of SF1. Introns are represented by grey horizontal lines and exons by vertical bars with numbers. The position of rs12142086 is highlighted with a star. In t ...
Cloning and Expression of Cellulosimicrobium cellulans β
... the preservation of original nutrients in the forage crop for feeding at a later date [7]. Therefore, ensiled forages are the most commonly used feeds for ruminants all over the world [8]. Lactobacillus plantarum and other Lactobacillus species, Enterococcus faecium and Pediococcus species are most ...
... the preservation of original nutrients in the forage crop for feeding at a later date [7]. Therefore, ensiled forages are the most commonly used feeds for ruminants all over the world [8]. Lactobacillus plantarum and other Lactobacillus species, Enterococcus faecium and Pediococcus species are most ...
Detection and copy number estimation of the transgenic nucleotide
... The research and field trials of genetically modified rice in Pakistan began in the early 90s. The main aim then was to introduce resistance against bacterial pathogens in the elite rice cultivars. In 1997, a variety of basmati called ‘Super Basmati’ was transformed by the Xa21 gene using a micro-pr ...
... The research and field trials of genetically modified rice in Pakistan began in the early 90s. The main aim then was to introduce resistance against bacterial pathogens in the elite rice cultivars. In 1997, a variety of basmati called ‘Super Basmati’ was transformed by the Xa21 gene using a micro-pr ...
The amphioxus hairy family: differential fate after duplication.
... Several representatives of the hairy family have been so far isolated from a range of protostome and vertebrate species. In protostomes such as Drosophila they have been implicated in segmentation, peripheral nervous system development, and in somatic sex determination. In Tribolium, only a role dur ...
... Several representatives of the hairy family have been so far isolated from a range of protostome and vertebrate species. In protostomes such as Drosophila they have been implicated in segmentation, peripheral nervous system development, and in somatic sex determination. In Tribolium, only a role dur ...
Development and application of a positive
... markers. Presently, it is possible to stably transform four species of Plasmodium, the human parasite Plasmodium falciparum, the primate parasite Plasmodium knowlesi and two rodent malaria parasites, Plasmodium berghei and Plasmodium yoelii [for a review see (1)]. Introduction and integration of for ...
... markers. Presently, it is possible to stably transform four species of Plasmodium, the human parasite Plasmodium falciparum, the primate parasite Plasmodium knowlesi and two rodent malaria parasites, Plasmodium berghei and Plasmodium yoelii [for a review see (1)]. Introduction and integration of for ...
Understanding the Scurred condition in Polled Cattle
... usually blunt and rounded at the end, short for their diameter, and attached only to the skin. Occasionally the scur will become solidly attached to the skull, particularly on bulls, when they are several years old. Scurred cattle should be classified as polled since they do have a polled gene. Only ...
... usually blunt and rounded at the end, short for their diameter, and attached only to the skin. Occasionally the scur will become solidly attached to the skull, particularly on bulls, when they are several years old. Scurred cattle should be classified as polled since they do have a polled gene. Only ...
Evolution of Mammalian KELL Blood Group Glycoproteins and
... proteins are shown in Figure 1, together with previously reported sequences for human [2] and mouse KELL proteins [9] (Table 1). Alignments of human with other mammalian sequences examined were between 55-98% identical, suggesting that these are members of the same gene family, whereas comparisons o ...
... proteins are shown in Figure 1, together with previously reported sequences for human [2] and mouse KELL proteins [9] (Table 1). Alignments of human with other mammalian sequences examined were between 55-98% identical, suggesting that these are members of the same gene family, whereas comparisons o ...
Restriction fragment differential display of pediocin
... Pediocin PA-1, which is a bacteriocin produced by lactic acid bacteria, has potential as a biopreservative of food. However, such use may lead to the development of resistance in the target organism. Gene expression in two independent pediocin-resistant mutants of Listeria monocytogenes 412 was comp ...
... Pediocin PA-1, which is a bacteriocin produced by lactic acid bacteria, has potential as a biopreservative of food. However, such use may lead to the development of resistance in the target organism. Gene expression in two independent pediocin-resistant mutants of Listeria monocytogenes 412 was comp ...
Molecular Evolution of Overlapping Genes
... Overlapping genes are defined as a pair of protein-coding genes whose coding regions overlap on either the same strand or on the opposite strand. The sequence interdependence between two overlapping coding regions adds complexity to almost all molecular evolution analyses. Here, I use a comparative- ...
... Overlapping genes are defined as a pair of protein-coding genes whose coding regions overlap on either the same strand or on the opposite strand. The sequence interdependence between two overlapping coding regions adds complexity to almost all molecular evolution analyses. Here, I use a comparative- ...
FEBS Letters
... As a ¢rst step towards the identi¢cation of the gene encoding Dxr, the characteristic enzyme for the MEP pathway, a suitable gene probe was developed. The deduced dxr sequence of E. coli (P45568) was therefore compared to the hypothetical Dxr-like protein sequence of the sequenced genome of Synechoc ...
... As a ¢rst step towards the identi¢cation of the gene encoding Dxr, the characteristic enzyme for the MEP pathway, a suitable gene probe was developed. The deduced dxr sequence of E. coli (P45568) was therefore compared to the hypothetical Dxr-like protein sequence of the sequenced genome of Synechoc ...
Document
... Biological Setup Every cell in the human body contains the entire human genome: 3.3 Gb or ~30K genes. The investigation of gene expression is meaningful because different cells, in different environments, doing different jobs express different genes. Tasks necessary for gene expression analysis: Def ...
... Biological Setup Every cell in the human body contains the entire human genome: 3.3 Gb or ~30K genes. The investigation of gene expression is meaningful because different cells, in different environments, doing different jobs express different genes. Tasks necessary for gene expression analysis: Def ...
Slide 1
... Identify SNPs for gene associated with disease Find the different sets of SNPs in a control population Find different sets of SNPs in affected population Look for unique sets of SNPs in affected population ...
... Identify SNPs for gene associated with disease Find the different sets of SNPs in a control population Find different sets of SNPs in affected population Look for unique sets of SNPs in affected population ...
The Mouse Prolactin Gene Family Locus
... RP23–231P12, and near the PLF gene cluster. Thus far, we have only identified a single PLF gene from a subfamily of at least four highly related PLF genes. The sequence of the identified PLF gene is very similar but different than each of the known sequences for PLF-1, PLF-2, PLF-3, and PLF-4 (18, 5 ...
... RP23–231P12, and near the PLF gene cluster. Thus far, we have only identified a single PLF gene from a subfamily of at least four highly related PLF genes. The sequence of the identified PLF gene is very similar but different than each of the known sequences for PLF-1, PLF-2, PLF-3, and PLF-4 (18, 5 ...
gmod-update-07nov - IUBio Archive for Biology
... http://eugenes.org/gmod/docs/gmod-intro-07oct.pdf ...
... http://eugenes.org/gmod/docs/gmod-intro-07oct.pdf ...
Title: FISH analysis comparing the gene composition of the Onager
... The onager [E. hemionus onager, EHO] and the domestic horse [E. caballus, ECA] have evolved over the course of 3.7 million years. The closely related EHO and ECA have diploid chromosome numbers of 2n=56 and 2n=64, respectively. Comparative gene mapping was done by FISH [fluorescent in-situ hybridiza ...
... The onager [E. hemionus onager, EHO] and the domestic horse [E. caballus, ECA] have evolved over the course of 3.7 million years. The closely related EHO and ECA have diploid chromosome numbers of 2n=56 and 2n=64, respectively. Comparative gene mapping was done by FISH [fluorescent in-situ hybridiza ...
The causal meaning of Fisher`s average effect
... mud if we have already observed rain. Because cooccurrence is symmetric, it also becomes more likely that it has rained if we have already observed mud. On the other hand, (2) symbolizes the much stronger and asymmetrical assertion that rain causes mud and not vice versa ; muddying up the backyard w ...
... mud if we have already observed rain. Because cooccurrence is symmetric, it also becomes more likely that it has rained if we have already observed mud. On the other hand, (2) symbolizes the much stronger and asymmetrical assertion that rain causes mud and not vice versa ; muddying up the backyard w ...
Hox, ParaHox, ProtoHox: facts and guesses
... The four-gene model is supported by phylogenetic analyses of the 60 aa homeodomain alone (or the homeodomain plus five flanking aa), of proteins that diverged more than 800 million years ago (Banerjee-Basu and Baxevanis, 2001; Peterson et al, 2004). The bootstrap values for any particular grouping o ...
... The four-gene model is supported by phylogenetic analyses of the 60 aa homeodomain alone (or the homeodomain plus five flanking aa), of proteins that diverged more than 800 million years ago (Banerjee-Basu and Baxevanis, 2001; Peterson et al, 2004). The bootstrap values for any particular grouping o ...
A novel C. elegans zinc finger transcription factor, lsy
... organism is determined and stabilized by feedback loops composed of gene regulatory factors (Monod and Jacob, 1961). The autoregulation of transcription factors has now indeed been recognized as a major feature of gene differentiation programs (Davidson, 2001; Edlund and Jessell, 1999). We have rece ...
... organism is determined and stabilized by feedback loops composed of gene regulatory factors (Monod and Jacob, 1961). The autoregulation of transcription factors has now indeed been recognized as a major feature of gene differentiation programs (Davidson, 2001; Edlund and Jessell, 1999). We have rece ...