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Functional genomics analysis of the effects of co- decarboxylase/ornithine decarboxylase
Functional genomics analysis of the effects of co- decarboxylase/ornithine decarboxylase

... Polyamines are ubiquitous components of all living cells and their depletion usually causes growth arrest or cytostasis, a strategy employed for treatment of West-African trypanosomiasis. In the malaria parasite, Plasmodium falciparum, polyamine biosynthesis is regulated by the uniquely bifunctional ...
Centromere Locations and Associated Chromosome
Centromere Locations and Associated Chromosome

... CEN5 is more complex. The formation of chromosome V of A. thaliana involved a reciprocal translocation (see above and Figure 1), and an understanding of this event is critical for interpreting the origin of CEN5. Previous comparative molecular cytogenetic analyses of A. thaliana and A. lyrata could ...
Real time PCR and it`s role in diagnosis
Real time PCR and it`s role in diagnosis

... falciparum parasite is of extreme importance if we are to combat human malaria.This parasite uses the process of antigenic variation to expose the human immune system to continually changing antigens on the surface of infected red blood cells. Real-time PCR assays have the potential to detect low le ...
MRSA - Infectious Diseases
MRSA - Infectious Diseases

... a mobile genetic element (22-100 kb) located on chromosome; contains mecA and insertion sites (for multidrug resistance determinants) ...
fulltext
fulltext

Clin Infect Dis. - Repositorio Académico UPC
Clin Infect Dis. - Repositorio Académico UPC

Gene Section JAK2 (janus kinase 2) Atlas of Genetics and Cytogenetics
Gene Section JAK2 (janus kinase 2) Atlas of Genetics and Cytogenetics

... 25 exons spanning roughly 140 kb of genomic DNA; 5402 bp pre-mRNA; 6 different transcripts, putatively encoding 4 different protein isoforms. ...
Molecular Cloning of Dog Mast Cell Tryptase and a Related Protease
Molecular Cloning of Dog Mast Cell Tryptase and a Related Protease

... electrophoresed through a 1% agarose gel. The RNA was transferred and immobilized on a Hybond-N membrane (Amersham). The RNA was then hybridized either to a 23-base oligonucleotide complementary to bases 15 1-173 of the tryptase cDNA or to an 18-base oligonucleotide complementary to bases 682-699 of ...
Trichothiodystrophy: Update on the sulfur
Trichothiodystrophy: Update on the sulfur

... defective synthesis of high-sulfur matrix proteins. Abnormalities in excision repair of ultraviolet (UV)damaged DNA are recognized in about half of the patients. Three distinct autosomal recessive syndromes are associated with nucleotide excision repair (NER) defects: the photosensitive form of TTD, ...
Benzimidazole resistance survey for Haemonchus - diss.fu
Benzimidazole resistance survey for Haemonchus - diss.fu

... et al., 2004). Third stage larvae (L3) were recovered and identified using the morphological keys proposed by van Wyk et al. (2004). When a coproculture had 100 or fewer L3, all were identified; when more than 100 larvae were present, only the first 100 were identified. It is worth noting that Teladorsa ...
ppt for
ppt for

... two protein-coding genes piRNA cluster. The inserted segment is depicted in brackets. (B) The inserted segment is scanned against the genome to locate the source paralog. (C) Similarity between cluster- and source paralog-harboring regions includes preceding ...
Creative Activities in Music – A Genome
Creative Activities in Music – A Genome

... Creative activities in music represent cognitive functions of the human brain. A creative performance can be defined as a production of work or performance that is both original and appropriate for the situation in which it occurs [1–3]. Creativity requires the presence of several traits including i ...
Bio::Seq
Bio::Seq

... • Whether writing or appending to a file, the new method creates the file if it does not exist • Write overwrites all data in the file if one existed, append adds sequences to the end • The following writes a sequence to a file # $seq has previously been defined as a Bio::Seq object my $seqio = Bio: ...
2004-2005
2004-2005

Tracing the Thread of Plastid Diversity through the Tapestry of Life
Tracing the Thread of Plastid Diversity through the Tapestry of Life

... advantage in the endosymbiotic environment may be lost outright. A probable example of such a loss is that of the cyanobacterial cell wall, which is entirely lacking in most plastid lineages (but see comments on the plastids in glaucocystophytes in “Three Lineages of Primary Plastids”). In the secon ...
ABO genotyping in leukemia patients reveals new ABO variant alleles
ABO genotyping in leukemia patients reveals new ABO variant alleles

... serious risk for erroneous interpretation in ABO genotyping (Hosseini-Maaf et al., 2005). Interestingly, a sample typed serologically as blood group O, showed inconclusive ABO PCR-ASP genotyping. After DNA sequencing, it was possible to detect a reciprocal translocation in exon 7 (Table 3). The dete ...
Chromosome 4q31 locus in COPD is also associated with lung cancer
Chromosome 4q31 locus in COPD is also associated with lung cancer

... FEV1/forced vital capacity (FVC) ,70% and FEV1 f80% predicted) using pre-bronchodilator spirometric measurements. A modified ATS respiratory questionnaire was administered to all cases and controls, which collected data on ...
Gene interactions in the evolution of genomic imprinting
Gene interactions in the evolution of genomic imprinting

... ‘additive-by-additive’ epistasis, see Cheverud and Routman, 1996). To reflect this pattern, we assign the same subscripts to those alleles that work best together. We focus on this form of epistasis because it does not contain any dominance effect, and therefore these models are not influenced by se ...
Global transcriptional control by glucose and
Global transcriptional control by glucose and

... B. anthracis are attenuated on virulence in animal models of infection (24,28). The coordinate CcpA-dependent regulation of virulence and carbon utilization genes might be critical for fitness when pathogens compete with other microbes for niche colonization (23). Recently, we have demonstrated that ...
Minimal metabolic pathway structure is consistent with
Minimal metabolic pathway structure is consistent with

... same transcription factor (TF). We compared MinSpan pathways to PPI and genetic interactions in S. cerevisiae and the TRN of E. coli as the datasets are most complete for those particular organisms (Fig 2C). By testing for significant Spearman correlation coefficients of cooccurrence or co-absence o ...
Both Polymorphic Variable Number of Tandem Repeats
Both Polymorphic Variable Number of Tandem Repeats

... human autoimmunity (10,22–24). INS-VNTR situated 5⬘upstream of the INS promoter, is regarded as a causal variant at the locus after a close correlation was found between VNTR haplotypes and insulin thymic expression (7,8). However, comprehensive resequencing of the locus revealed two polymorphisms t ...
Concentrations of the atherogenic Lp(a) are elevated in FH
Concentrations of the atherogenic Lp(a) are elevated in FH

... chromosome 6q27,7–9 but several rare genetic conditions reportedly also affect Lp(a) levels (eg LPL deficiency,10 LCAT deficiency,11 abetalipoproteinemia).12 Other variables like age, sex, body weight or diet have been excluded as significant determinants of Lp(a) concentrations.13,14 Initial studie ...
A caudal mRNA gradient controls posterior development in the wasp
A caudal mRNA gradient controls posterior development in the wasp

... KEY WORDS: Caudal, Nasonia, Segmentation ...
Molecular and metabolic changes of cherelle wilt of cacao and its
Molecular and metabolic changes of cherelle wilt of cacao and its

Bioinformatics in Drug Design
Bioinformatics in Drug Design

... an alignment by estimating this ratio (= improvement over random). • In brief, each substitution score is the log-odds probability that amino acid a could change (mutate) into amino acid b through evolution, based on the constraints of our evolutionary model. [16] Substitution matrices – Sequence an ...
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RNA-Seq



RNA-seq (RNA sequencing), also called whole transcriptome shotgun sequencing (WTSS), is a technology that uses the capabilities of next-generation sequencing to reveal a snapshot of RNA presence and quantity from a genome at a given moment in time.
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