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biochemistry of proteins and nucleic acids
biochemistry of proteins and nucleic acids

... The aim of the lesson: to give an idea about alimentary value of proteins, molecular mechanisms of their digestion and absorption in gastrointestinal tract, paths of formation of amino acid pool in tissues and fluids of the organism. To master methods of determination of acidity and pathological com ...
The Molecular Origami of Fungal Polyketides
The Molecular Origami of Fungal Polyketides

... Aflatoxin is an unavoidable food contaminant in grains and nuts produced in developing countries. Chronic ingestion of nuts and grains contaminated with aflatoxin-producing molds such as Aspergillus parasiticus leads to a high rate of liver cancer, and is a large problem in developing countries. Afl ...
Chapter 9: Cellular Respiration: Harvesting Chemical Energy Living
Chapter 9: Cellular Respiration: Harvesting Chemical Energy Living

... -Cell organizes small organic molecules into polymers -proteins -DNA -Pumps substances across membranes -Grows, reproduces -Maintains complex structures -Work to maintain complex structure, order in intrinsically unstable -Energy enters ecosystems in the form of sunlight -Plants and other photosynth ...
Sites of enzyme activity along the nephron
Sites of enzyme activity along the nephron

... pmoles/mm/min within the proximal convolution [27] whereas hexokinase activity calculated from the present study is only 2 pmoles/mm/min. Thus, hexokinase activity is too low to account for the high transport rate of glucose. From the enzymatic data we conclude that only 5% of glucose entering the c ...
Control of Gene Expression in Prokaryotes.
Control of Gene Expression in Prokaryotes.

... the consensus sequence at -10 and -35. The combination of the two controls means beta gal and lac permease are transcribed at high levels. In scenario 2 the repressor is off the operator but the CAP (without cAMP) is not bound to the DNA so initiation only occurs at a low rate  little transcription ...
pH - TeacherWeb
pH - TeacherWeb

... Characteristics of Enzymes • Some functional enzymes consist of two parts – Protein portion – Cofactor (metal ion) or coenzyme (organic molecule often a vitamin) ...
Control of Gene Expression in Prokaryotes.
Control of Gene Expression in Prokaryotes.

... genes(extra chromosomal) for the lac operon, found that the control of this gene expression had two elements; a cis acting factor and a trans acting factor. They isolated many mutants of E. coli where the lesion was either on the genomic DNA or on the extra chromosomal copy. From the analysis of the ...
I. Cellular Energy • ATP: a) When the terminal phosphate is removed
I. Cellular Energy • ATP: a) When the terminal phosphate is removed

... ATP/electron pair (38 ATP’s/glucose molecule). b) Skeletal muscle, brain cells: another shuttle system transfers electrons from NADH through the inner mitochondrial membrane to ubiquinone to yield only 2 ATP’s/electron pair (36 ATP’s/glucose molecule). Regulating Cellular Respiration Cellular respir ...
Bio1A - Lec 9 slides File
Bio1A - Lec 9 slides File

... Cofactors, Coenzymes & Prosthetic groups are REQUIRED portions of the enzyme. • often required for proper protein folding • typically required at the active site -For bonding -Supplies electrons or functional groups for the reaction -Temporarily for E-S transient complexes ...
Effects of Enzyme Concentration, Temperature, pH
Effects of Enzyme Concentration, Temperature, pH

PDF - School of Chemistry
PDF - School of Chemistry

... selectivity, and then to use rounds of mutations (sometimes via directed evolution) to improve these properties.2b,5 While the exquisite functionalities of natural enzymes are not yet fully matched, good progress is being made using this approach.2e,6 Much less has been achieved in this area using t ...
Lec 16: Nitrogen (ammonia) assimilation
Lec 16: Nitrogen (ammonia) assimilation

... 1. It forms AMP from ATP… (instead of forming ADP as in glutamine synthetase) 2. “Ammonia” can be free ammonia OR the amide of glutamine It turns out… using glutamine is preferred over using ammonia in this case. Therefore, this enzyme is not a major enzyme for ammonia assimilation. ...
Homework Solutions
Homework Solutions

... 21.24 Sarin is an irreversible inhibitor since it forms a covalent bond at the enzyme’s active site. 21.25 Fibrin and thrombin circulate as inactive zymogens (fibrinogen and prothrombin) so that the blood does not clot unnecessarily. They are activated as required at a bleeding point to form a clot. ...
Structural Features of Angiotensin-I Converting Enzyme Catalytic Sites
Structural Features of Angiotensin-I Converting Enzyme Catalytic Sites

... geometry into three types of zinc binding sites [20,21]: (i) the catalytic, (ii) the cocatalytic and (iii) the structural. Hydrolases like ACE possess a catalytic zinc site which usually coordinates with nitrogen, oxygen and sulphur donors of His, Glu, Asp and Cys residues while His is most frequent ...
Biomolecules
Biomolecules

... (ii) Oligosaccharides: Carbohydrates that yield two to ten monosaccharide units, on hydrolysis, are called oligosaccharides. They are further classified as disaccharides, trisaccharides, tetrasaccharides, etc., depending upon the number of monosaccharides, they provide on hydrolysis. Amongst these t ...
PURINE & PYRIMIDINE METABOLISM
PURINE & PYRIMIDINE METABOLISM

Bioenergetics and Metabolism
Bioenergetics and Metabolism

Design of gRNA and construction of gRNA expression vectors
Design of gRNA and construction of gRNA expression vectors

... Construction of gRNA expression vectors is done basically according to the protocol described in Mali et al. (1) with some modifications. https://www.addgene.org/static/cms/filer_public/a6/07/a6071d7a-7e83-4547-a69f17b2b79a6cbc/cas9-orthologs-grna-choices.pdf 1. Using the CRISPRdirect web tool (http ...
Anchoring of Surface Proteins to the Cell Wall of Staphylococcus
Anchoring of Surface Proteins to the Cell Wall of Staphylococcus

... but do not form a thiolate-imidazolium ion pair in the absence of LPXTG substrate. The drawing was adapted from data generated by Ilangovan et al. (15, 20). ...
PG1005 Lecture 11 Glycolysis
PG1005 Lecture 11 Glycolysis

... Why is ATP The Cellular Energy Source? •  Many cell processes are not energetically favourable and are thus require energy input to drive endergonic reaction The heat energy (free enthalpy) released from ATP can be harnessed to give the activation energy required to drive reactions This can be the ...
Chapter 4 powerpoint file
Chapter 4 powerpoint file

... occur. They may also perform reactions that would not otherwise take place. ...
Lipase Production from Free Cells and Immobilized Whole Cells
Lipase Production from Free Cells and Immobilized Whole Cells

... Screening of Lipase: A simple and reliable method for detecting lipase activity in lactobacillus is the use of surfactant Tween 80 in a solid medium to identify a lipolytic activity. The formation of precipitation around the well is an indication of lipase production by the organisms. Purification b ...
The cyanide hydratase from Neurospora crassa forms a helix
The cyanide hydratase from Neurospora crassa forms a helix

... 1992) exists that a thioimidate intermediate is formed by a nucleophilic attack of the active site cysteine on the hydrogen cyanide. This is then hydrolyzed with the formation of ammonia and an acyl intermediate in the case of CynD or formamide in the case of the cyanide hydratases. Presumably, subt ...
Lecture 10
Lecture 10

... • Two specific phosphatases catalyze the hydrolysis of fructose 1,6-bisphosphate and glucose 6-phosphate. ...
51`oUL cUoa
51`oUL cUoa

... relative amount of plasma protein fractions but the total protein content can undergo a change depending on the different disease states. A large number of methods are available for determination of plasma proteins and they are different in their sensitivity and specificity. The commonly used spectr ...
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Enzyme



Enzymes /ˈɛnzaɪmz/ are macromolecular biological catalysts. Enzymes accelerate, or catalyze, chemical reactions. The molecules at the beginning of the process are called substrates and the enzyme converts these into different molecules, called products. Almost all metabolic processes in the cell need enzymes in order to occur at rates fast enough to sustain life. The set of enzymes made in a cell determines which metabolic pathways occur in that cell. The study of enzymes is called enzymology.Enzymes are known to catalyze more than 5,000 biochemical reaction types. Most enzymes are proteins, although a few are catalytic RNA molecules. Enzymes' specificity comes from their unique three-dimensional structures.Like all catalysts, enzymes increase the rate of a reaction by lowering its activation energy. Some enzymes can make their conversion of substrate to product occur many millions of times faster. An extreme example is orotidine 5'-phosphate decarboxylase, which allows a reaction that would otherwise take millions of years to occur in milliseconds. Chemically, enzymes are like any catalyst and are not consumed in chemical reactions, nor do they alter the equilibrium of a reaction. Enzymes differ from most other catalysts by being much more specific. Enzyme activity can be affected by other molecules: inhibitors are molecules that decrease enzyme activity, and activators are molecules that increase activity. Many drugs and poisons are enzyme inhibitors. An enzyme's activity decreases markedly outside its optimal temperature and pH.Some enzymes are used commercially, for example, in the synthesis of antibiotics. Some household products use enzymes to speed up chemical reactions: enzymes in biological washing powders break down protein, starch or fat stains on clothes, and enzymes in meat tenderizer break down proteins into smaller molecules, making the meat easier to chew.
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