
Black and White Nucleotide Metabolism english document for
... 1. De novo synthesis pathway is the pathway involves with different enzymes to create nucleotide molecule. 2. Salvage pathway is the pathway that relies on recycling of degradative product of DNA or RNA molecule. ...
... 1. De novo synthesis pathway is the pathway involves with different enzymes to create nucleotide molecule. 2. Salvage pathway is the pathway that relies on recycling of degradative product of DNA or RNA molecule. ...
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... (2) Chymotrypsin is a serine protease that uses the side chain of serine to perform the amide hydrolysis. The side chain of serine is CH2OH. Consider the rate of the same amide hydrolysis using a cysteine protease. (The side chain of cysteine in CH2SH.) Based on the information given what can we con ...
... (2) Chymotrypsin is a serine protease that uses the side chain of serine to perform the amide hydrolysis. The side chain of serine is CH2OH. Consider the rate of the same amide hydrolysis using a cysteine protease. (The side chain of cysteine in CH2SH.) Based on the information given what can we con ...
Biomolecular chemistry 3. Translating the genetic code
... • In bacteria there is a specific tRNA, known as the initiator tRNA, that carries fMet. This fMet-tRNA recognizes the first codon AUG following a purine-rich sequence, known as the Shine-Delgarno sequence (or box), that base-pairs with a complementary sequence in the ribosome. This is essentially th ...
... • In bacteria there is a specific tRNA, known as the initiator tRNA, that carries fMet. This fMet-tRNA recognizes the first codon AUG following a purine-rich sequence, known as the Shine-Delgarno sequence (or box), that base-pairs with a complementary sequence in the ribosome. This is essentially th ...
Intro to Metabolism II and Glycolysis
... III. Pridoxal phosphate, the prosthetic group of aminotransferases [S32] IV. Pyridoxal phosphate is bound to the enzyme through a Schiff-base linkage[S33] V. Role of biotin in carboxylation reactions [S34] a. Biotin is a water soluble vitamin. b. Biotin is utilized as a prosthetic group of several e ...
... III. Pridoxal phosphate, the prosthetic group of aminotransferases [S32] IV. Pyridoxal phosphate is bound to the enzyme through a Schiff-base linkage[S33] V. Role of biotin in carboxylation reactions [S34] a. Biotin is a water soluble vitamin. b. Biotin is utilized as a prosthetic group of several e ...
Biochemistry2 2016 Lecture Glycogen Metabolism
... liver ER. The catalytic site of glucose 6-phosphatase faces the lumen of the ER. A G6P transporter (T1) carries the substrate from the cytosol to the lumen, and the products glucose and Pi pass to the cytosol on specific transporters (T2 and T3). Glucose leaves the cell via the GLUT2 transporter in ...
... liver ER. The catalytic site of glucose 6-phosphatase faces the lumen of the ER. A G6P transporter (T1) carries the substrate from the cytosol to the lumen, and the products glucose and Pi pass to the cytosol on specific transporters (T2 and T3). Glucose leaves the cell via the GLUT2 transporter in ...
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... the criteria for identifying them in proteins are quite broad, as explained above. Another type of H bond that is commonly found in protein structures is the bifurcated H bond. In this case the slightly positively charged H atom is delocalized between two acceptor atoms. These are most often seen be ...
... the criteria for identifying them in proteins are quite broad, as explained above. Another type of H bond that is commonly found in protein structures is the bifurcated H bond. In this case the slightly positively charged H atom is delocalized between two acceptor atoms. These are most often seen be ...
economical protein digestion without compromise
... Protease, MS Grade has been treated with TPCK to eliminate chymotrypsin activity, improving digestion specificity. Native trypsin is also subject to autolysis, which can reduce enzyme stability and efficiency. To reduce autolytic degradation, Pierce Trypsin Protease, MS Grade is chemically modified ...
... Protease, MS Grade has been treated with TPCK to eliminate chymotrypsin activity, improving digestion specificity. Native trypsin is also subject to autolysis, which can reduce enzyme stability and efficiency. To reduce autolytic degradation, Pierce Trypsin Protease, MS Grade is chemically modified ...
Biomolecular chemistry 3. Translating the genetic code
... tRNA molecule that can recognize the codon by Watson-Crick base pairing. Transfer RNA serves as the adapter molecule that binds to a specific codon and brings with it an amino acid for incorporation into the polypeptide chain. Robert Holley first determined the base sequence of a tRNA molecule in 19 ...
... tRNA molecule that can recognize the codon by Watson-Crick base pairing. Transfer RNA serves as the adapter molecule that binds to a specific codon and brings with it an amino acid for incorporation into the polypeptide chain. Robert Holley first determined the base sequence of a tRNA molecule in 19 ...
Putrescine oxidase of Micrococcus rubens : primary
... contained BamHI fragments in the size range 4 . 2 4 5 kb, DNA was extracted by the sodium perchlorate method (Chen & Thomas, 1980) and ligated with T4 DNA ligase to BamHI-digested pUC19. The ligated mixture was then introduced by transformation into E. coli JM 109 and ampicillin-resistant transforma ...
... contained BamHI fragments in the size range 4 . 2 4 5 kb, DNA was extracted by the sodium perchlorate method (Chen & Thomas, 1980) and ligated with T4 DNA ligase to BamHI-digested pUC19. The ligated mixture was then introduced by transformation into E. coli JM 109 and ampicillin-resistant transforma ...
NTPase/helicase of Flaviviridae: inhibitors and inhibition of the
... (Gorbalenya et al., 1989; Lain et al., 1989). The SF2 NTPase/helicases are further divided, according to the sequence surrounding the conserved D-E residues (Walker motif B) in three different subgroups of proteins. The first is formed by the classic D-E-A-D box proteins, and the other are named D-E ...
... (Gorbalenya et al., 1989; Lain et al., 1989). The SF2 NTPase/helicases are further divided, according to the sequence surrounding the conserved D-E residues (Walker motif B) in three different subgroups of proteins. The first is formed by the classic D-E-A-D box proteins, and the other are named D-E ...
Three Way Gateway Reactions for Modular Gene
... These steps can be efficiently combined into a single reaction containing three component plasmids: 1. “Intermediate targeting vector” plasmid with R1/R2 and R3/R4 Gateway sites. The intermediate targeting vector is gene specific and contains the homology arms, targeting cassette and AsiSI vector li ...
... These steps can be efficiently combined into a single reaction containing three component plasmids: 1. “Intermediate targeting vector” plasmid with R1/R2 and R3/R4 Gateway sites. The intermediate targeting vector is gene specific and contains the homology arms, targeting cassette and AsiSI vector li ...
17 - Stanford University
... data obtained from various concentrations of the substrate and enzyme at different pH conditions.14 From this analysis, it was found that the rate-limiting step is the proton abstraction step, and the primary kinetic isotope (KIE) effects, Hk/Dk, have been determined to be 1.9 and 1.3 for the L- to ...
... data obtained from various concentrations of the substrate and enzyme at different pH conditions.14 From this analysis, it was found that the rate-limiting step is the proton abstraction step, and the primary kinetic isotope (KIE) effects, Hk/Dk, have been determined to be 1.9 and 1.3 for the L- to ...
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... KEY REACTIONS of GLYCOLYSIS substrate level phosphorylation redox reaction involving NAD ...
... KEY REACTIONS of GLYCOLYSIS substrate level phosphorylation redox reaction involving NAD ...
Course Objectives
... At the end of this course, the students will be able to 1. explain chemical processes occurred in living system, structure and functional relationship of biomolecules 2. point out the regulation of metabolic pathways governing the life of a cell 3. know and understand energy metabolism, biosynthesis ...
... At the end of this course, the students will be able to 1. explain chemical processes occurred in living system, structure and functional relationship of biomolecules 2. point out the regulation of metabolic pathways governing the life of a cell 3. know and understand energy metabolism, biosynthesis ...
Regulation of Acetyl-Coenzyme A Carboxylase and
... Acetyl-CoA Carboxylase, A cetyl-CoA Synthetase, Light D ependence o f Fatty Acid Synthesis in Chloroplasts In analogy to chloroplast fatty acid synthesis from acetate the key enzym es o f acetate fixation, acetyl-CoA synthetase and acetyl-CoA carboxylase, in rapidly Triton X-100 lysed spinach chloro ...
... Acetyl-CoA Carboxylase, A cetyl-CoA Synthetase, Light D ependence o f Fatty Acid Synthesis in Chloroplasts In analogy to chloroplast fatty acid synthesis from acetate the key enzym es o f acetate fixation, acetyl-CoA synthetase and acetyl-CoA carboxylase, in rapidly Triton X-100 lysed spinach chloro ...
A study of archaeal enzymes involved in polar lipid
... Archaetidylcholine (AC), archaetidylserine (AS), archaetidylglycerol (AG) and archaetidylinositol (AI) have been identified in archaeal membranes as the counterparts of the phosphatidyl derivatives, PC, PS, PG and PI. As in Eukarya and Bacteria, an archaebacterium does not always utilize all of the ...
... Archaetidylcholine (AC), archaetidylserine (AS), archaetidylglycerol (AG) and archaetidylinositol (AI) have been identified in archaeal membranes as the counterparts of the phosphatidyl derivatives, PC, PS, PG and PI. As in Eukarya and Bacteria, an archaebacterium does not always utilize all of the ...
Enzyme

Enzymes /ˈɛnzaɪmz/ are macromolecular biological catalysts. Enzymes accelerate, or catalyze, chemical reactions. The molecules at the beginning of the process are called substrates and the enzyme converts these into different molecules, called products. Almost all metabolic processes in the cell need enzymes in order to occur at rates fast enough to sustain life. The set of enzymes made in a cell determines which metabolic pathways occur in that cell. The study of enzymes is called enzymology.Enzymes are known to catalyze more than 5,000 biochemical reaction types. Most enzymes are proteins, although a few are catalytic RNA molecules. Enzymes' specificity comes from their unique three-dimensional structures.Like all catalysts, enzymes increase the rate of a reaction by lowering its activation energy. Some enzymes can make their conversion of substrate to product occur many millions of times faster. An extreme example is orotidine 5'-phosphate decarboxylase, which allows a reaction that would otherwise take millions of years to occur in milliseconds. Chemically, enzymes are like any catalyst and are not consumed in chemical reactions, nor do they alter the equilibrium of a reaction. Enzymes differ from most other catalysts by being much more specific. Enzyme activity can be affected by other molecules: inhibitors are molecules that decrease enzyme activity, and activators are molecules that increase activity. Many drugs and poisons are enzyme inhibitors. An enzyme's activity decreases markedly outside its optimal temperature and pH.Some enzymes are used commercially, for example, in the synthesis of antibiotics. Some household products use enzymes to speed up chemical reactions: enzymes in biological washing powders break down protein, starch or fat stains on clothes, and enzymes in meat tenderizer break down proteins into smaller molecules, making the meat easier to chew.