
IB496-April 10 - School of Life Sciences
... TCA, and so on); V Rub (refixation by Rubisco). Metabolites: Ac-CoA, acetyl coenzymeA; DHAP, dihydroxyacetone-3-phosphate; E4P, erythrose-4-phosphate; Fru-6P, fructose-6-phosphate; GAP, glyceraldehydes-3-phosphate; Glc-6P, glucose-6phosphate; PGA, 3-phosphoglyceric acid; Pyr, pyruvate; R-5P, ribose- ...
... TCA, and so on); V Rub (refixation by Rubisco). Metabolites: Ac-CoA, acetyl coenzymeA; DHAP, dihydroxyacetone-3-phosphate; E4P, erythrose-4-phosphate; Fru-6P, fructose-6-phosphate; GAP, glyceraldehydes-3-phosphate; Glc-6P, glucose-6phosphate; PGA, 3-phosphoglyceric acid; Pyr, pyruvate; R-5P, ribose- ...
Proteins
... Another major compound of living things is protein. Proteins make up the bulk of all solid material within your body and other living organisms. Proteins are the most structurally sophisticated molecules known. They vary extensively in structure with each type of protein having a unique three-dimens ...
... Another major compound of living things is protein. Proteins make up the bulk of all solid material within your body and other living organisms. Proteins are the most structurally sophisticated molecules known. They vary extensively in structure with each type of protein having a unique three-dimens ...
PDF - Yeh Lab
... of Brij 58 (Table 1). Enzyme turnover of cyclic product increased from 23.9 min⫺1 to 78.1 min⫺1 in presence of detergent. The kcat for hydrolysis product decreased from 19.3 min⫺1 to 11.3 min⫺1. As a result, the partition ratio between cyclization to hydrolysis increased from 1.2 in absence of deter ...
... of Brij 58 (Table 1). Enzyme turnover of cyclic product increased from 23.9 min⫺1 to 78.1 min⫺1 in presence of detergent. The kcat for hydrolysis product decreased from 19.3 min⫺1 to 11.3 min⫺1. As a result, the partition ratio between cyclization to hydrolysis increased from 1.2 in absence of deter ...
Biological Chemistry: Engineering New Functions for Natural Systems
... together . This recombined vector is then inserted into bacterial or yeast cells . Sequences in the DNA vectors force the host cell to activate the new gene, transcribing it to messenger RNA (mRNA) and then translating the mRNA into a protein . By combining genetic engineering techniques, scientists ...
... together . This recombined vector is then inserted into bacterial or yeast cells . Sequences in the DNA vectors force the host cell to activate the new gene, transcribing it to messenger RNA (mRNA) and then translating the mRNA into a protein . By combining genetic engineering techniques, scientists ...
Lecture 13 - 14 Conformation of proteins Conformation of a protein
... Primary structure of protein refers to the number of amino acids and the order in which they are covalently linked together. It also refers to the location of disulfide bridges, if there are any, in a polypeptide chain. The peptide bond is covalent in nature, quiet stable and referred as backb ...
... Primary structure of protein refers to the number of amino acids and the order in which they are covalently linked together. It also refers to the location of disulfide bridges, if there are any, in a polypeptide chain. The peptide bond is covalent in nature, quiet stable and referred as backb ...
Slide 1 - E-Learning/An-Najah National University
... Kinds of RNA The class of RNA found in ribosomes is called ribosomal RNA (rRNA). During polypeptide synthesis, rRNA provides the site where polypeptides are assembled. Transfer RNA (tRNA) molecules both transport the amino acids to the ribosome for use in building the polypeptides and position ...
... Kinds of RNA The class of RNA found in ribosomes is called ribosomal RNA (rRNA). During polypeptide synthesis, rRNA provides the site where polypeptides are assembled. Transfer RNA (tRNA) molecules both transport the amino acids to the ribosome for use in building the polypeptides and position ...
Document
... stomach. At first she thought he was just being fussy, but sometimes he would actually look yellow. Medical testing confirmed hemolytic anemia. What’s up with Omar? ...
... stomach. At first she thought he was just being fussy, but sometimes he would actually look yellow. Medical testing confirmed hemolytic anemia. What’s up with Omar? ...
EXAM 2 Lecture 15 1. What are cofactors? A: They are small organic
... can drive these special reactions. 2. What are the two subdivisions of cofactors? A: Essential ions and coenzymes 3. What are the further subdivisions of essential ions and how strong do they bind? A: Activator ions (loosely bound) and metal ions of metalloenzymes (tightly bound) 4. What are the fur ...
... can drive these special reactions. 2. What are the two subdivisions of cofactors? A: Essential ions and coenzymes 3. What are the further subdivisions of essential ions and how strong do they bind? A: Activator ions (loosely bound) and metal ions of metalloenzymes (tightly bound) 4. What are the fur ...
2.3 Carbon-Based Molecules
... 2.3 Carbon-Based Molecules • Carbohydrates can be broken down to provide energy for cells. • Some carbohydrates are part of cell structure. Polymer (starch) Starch is a polymer of glucose monomers that often has a branched structure. ...
... 2.3 Carbon-Based Molecules • Carbohydrates can be broken down to provide energy for cells. • Some carbohydrates are part of cell structure. Polymer (starch) Starch is a polymer of glucose monomers that often has a branched structure. ...
Gluconeogenesis
... Fatty acids contribute to the fasting organism with ATP through β-oxidation and oxidation of ketone bodies in the Krebs cycle. Ketone bodies only partially substitute for glucose and are synthesized by a pathway different from gluconeogenesis. Ketone bodies are potentially dangerous in the absence o ...
... Fatty acids contribute to the fasting organism with ATP through β-oxidation and oxidation of ketone bodies in the Krebs cycle. Ketone bodies only partially substitute for glucose and are synthesized by a pathway different from gluconeogenesis. Ketone bodies are potentially dangerous in the absence o ...
Ion specific effects of sodium and potassium on the catalytic activity
... solvated in a periodic cubic water box, employing the SPC/E water model. The system with dimensions of approximately 79 x 79 x 79 Å3 contained 12335 water molecules. The total charge of the protein (+4e) was compensated by four chloride anions. Consequently, NaCl or KCl ions were introduced into the ...
... solvated in a periodic cubic water box, employing the SPC/E water model. The system with dimensions of approximately 79 x 79 x 79 Å3 contained 12335 water molecules. The total charge of the protein (+4e) was compensated by four chloride anions. Consequently, NaCl or KCl ions were introduced into the ...
Chapter 26:Biomolecules: Amino Acids, Peptides, and Proteins
... Cofactors • In addition to the protein part, many enzymes also have a nonprotein part called a cofactor • The protein part in such an enzyme is called an apoenzyme, and the combination of apoenzyme plus cofactor is called a holoenzyme. Only holoenzymes have biological activity; neither cofactor nor ...
... Cofactors • In addition to the protein part, many enzymes also have a nonprotein part called a cofactor • The protein part in such an enzyme is called an apoenzyme, and the combination of apoenzyme plus cofactor is called a holoenzyme. Only holoenzymes have biological activity; neither cofactor nor ...
DNA Scissors: Introduction to Restriction
... you find the EcoRI site (refer to the list above for the sequence). Make cuts through the phosphodiester backbone by cutting just between the G and the first A of the restriction site on both strands. Do not cut all the way through the strip. Remember that EcoRI cuts the backbone of each DNA strand ...
... you find the EcoRI site (refer to the list above for the sequence). Make cuts through the phosphodiester backbone by cutting just between the G and the first A of the restriction site on both strands. Do not cut all the way through the strip. Remember that EcoRI cuts the backbone of each DNA strand ...
Transcription Translation
... nuclear RNA plus a protein are called snRNP and these recognize splice sites Different snurps + additional protein form spliceosome ...
... nuclear RNA plus a protein are called snRNP and these recognize splice sites Different snurps + additional protein form spliceosome ...
Structure and Function of Macromolecules
... Enzymes are seriously affected by denaturation – but other proteins of the body can also be denatured. Although in most cases, a denatured protein loses its function permanently, in some cases, re-naturation can occur if the substance that promotes the denaturation is removed from the protein. This ...
... Enzymes are seriously affected by denaturation – but other proteins of the body can also be denatured. Although in most cases, a denatured protein loses its function permanently, in some cases, re-naturation can occur if the substance that promotes the denaturation is removed from the protein. This ...
Metabolism of Leukotrienes: The Linear Biosynthetic Pathway
... branches of this pathway. The heavy arrows indicate unidirectional steps by which LTB4 and LTC4 are exported from cells. FLAP denotes the 5-lipoxygenase activating protein. (From Lewis et al. (2).) Following AA mobilization the next step in LT biosynthesis, indeed the determining step, involves the ...
... branches of this pathway. The heavy arrows indicate unidirectional steps by which LTB4 and LTC4 are exported from cells. FLAP denotes the 5-lipoxygenase activating protein. (From Lewis et al. (2).) Following AA mobilization the next step in LT biosynthesis, indeed the determining step, involves the ...
Metabolic Patterns in Acetic Acid Bacteria
... For manometric work with suspensions of organisms, these were grown as described by Brown & Rainbow (1956)except that the glycophiles were grown on the same lactate-containingmedium as were the lactaphiles, in order to ensure as far as possible that differencesin the enzyme make-up of the organisms ...
... For manometric work with suspensions of organisms, these were grown as described by Brown & Rainbow (1956)except that the glycophiles were grown on the same lactate-containingmedium as were the lactaphiles, in order to ensure as far as possible that differencesin the enzyme make-up of the organisms ...
Biochemistry
... • Muscle tissue uses branched amino acids as fuel. • The nitrogen from these amino acids is transferred to alanine (through glutamate). • Alanine is carried to liver via blood stream. • Alanine is converted to pyruvate which is used to produce ...
... • Muscle tissue uses branched amino acids as fuel. • The nitrogen from these amino acids is transferred to alanine (through glutamate). • Alanine is carried to liver via blood stream. • Alanine is converted to pyruvate which is used to produce ...
Effect of ovarian hormones on mitochondrial enzyme activity in the
... and liver CPT I isozymes have exhibited many similarities, tissue-specific differences have been found in molecular masses (40) and sensitivity to inhibition by malonyl-CoA (26); therefore, further investigation of the effect of the ovarian hormones on skeletal muscle CPT I is warranted. Similarly, ...
... and liver CPT I isozymes have exhibited many similarities, tissue-specific differences have been found in molecular masses (40) and sensitivity to inhibition by malonyl-CoA (26); therefore, further investigation of the effect of the ovarian hormones on skeletal muscle CPT I is warranted. Similarly, ...
October 1 b. 1867 Wilder D. Bancroft, first systematic
... b. 1850 Henry Le Chatelier discovered the law of reaction governing the effect of pressure & temperature on equilibrium (Le Chatelier's Law); researcher on specific heat of gases at high temperature, mass action in explosives, & chemistry of silicates. b. 1883 Otto H. Warburg, researcher on respirat ...
... b. 1850 Henry Le Chatelier discovered the law of reaction governing the effect of pressure & temperature on equilibrium (Le Chatelier's Law); researcher on specific heat of gases at high temperature, mass action in explosives, & chemistry of silicates. b. 1883 Otto H. Warburg, researcher on respirat ...
The Role of NaCl in the Lysis of Staphylococcus
... Staphylococcusthat produced a lytic agent, lysostaphin, active against all of 59 strains of staphylococci tested. The specificity for organisms of the genus Staphylococcus separated its mode of action from that of lysozyme. The authors also described an assay for determining the quantity of enzyme b ...
... Staphylococcusthat produced a lytic agent, lysostaphin, active against all of 59 strains of staphylococci tested. The specificity for organisms of the genus Staphylococcus separated its mode of action from that of lysozyme. The authors also described an assay for determining the quantity of enzyme b ...
Enzyme

Enzymes /ˈɛnzaɪmz/ are macromolecular biological catalysts. Enzymes accelerate, or catalyze, chemical reactions. The molecules at the beginning of the process are called substrates and the enzyme converts these into different molecules, called products. Almost all metabolic processes in the cell need enzymes in order to occur at rates fast enough to sustain life. The set of enzymes made in a cell determines which metabolic pathways occur in that cell. The study of enzymes is called enzymology.Enzymes are known to catalyze more than 5,000 biochemical reaction types. Most enzymes are proteins, although a few are catalytic RNA molecules. Enzymes' specificity comes from their unique three-dimensional structures.Like all catalysts, enzymes increase the rate of a reaction by lowering its activation energy. Some enzymes can make their conversion of substrate to product occur many millions of times faster. An extreme example is orotidine 5'-phosphate decarboxylase, which allows a reaction that would otherwise take millions of years to occur in milliseconds. Chemically, enzymes are like any catalyst and are not consumed in chemical reactions, nor do they alter the equilibrium of a reaction. Enzymes differ from most other catalysts by being much more specific. Enzyme activity can be affected by other molecules: inhibitors are molecules that decrease enzyme activity, and activators are molecules that increase activity. Many drugs and poisons are enzyme inhibitors. An enzyme's activity decreases markedly outside its optimal temperature and pH.Some enzymes are used commercially, for example, in the synthesis of antibiotics. Some household products use enzymes to speed up chemical reactions: enzymes in biological washing powders break down protein, starch or fat stains on clothes, and enzymes in meat tenderizer break down proteins into smaller molecules, making the meat easier to chew.