User Manual of ClusterProject
... The column of Rep is indispensable whether the experiment has replication or not. If there is no replication, all values of this column are set to one. It can have additional factors in the input file such as dye, treatment or array et al. This is tab-delimited text file. Mixed model approaches are ...
... The column of Rep is indispensable whether the experiment has replication or not. If there is no replication, all values of this column are set to one. It can have additional factors in the input file such as dye, treatment or array et al. This is tab-delimited text file. Mixed model approaches are ...
VoIP Steganography and Its Detection – A Survey
... • Surprisingly, a lot of research effort is still devoted for improving methods like LSB. • Little effort has been devoted to the deployment of the methods that modify the time relations between packets in the RTP stream, which is an important branch of the network steganography field. • Each method ...
... • Surprisingly, a lot of research effort is still devoted for improving methods like LSB. • Little effort has been devoted to the deployment of the methods that modify the time relations between packets in the RTP stream, which is an important branch of the network steganography field. • Each method ...
ConditionalRandomFields2 - CS
... • Summary: we presented a polynomial algorithm for computing likelihood in HMMs. Learning Seminar, 2004 ...
... • Summary: we presented a polynomial algorithm for computing likelihood in HMMs. Learning Seminar, 2004 ...
Bayesian Networks Classifiers for Gene-Expression Data
... to predict. This is called variable to classify or, simply, class. A classifier is a function that maps an instance into a class label. Bayesian networks have been successfully applied to classification problems in many ways by inducing classifiers using different types of Bayesian network learning ...
... to predict. This is called variable to classify or, simply, class. A classifier is a function that maps an instance into a class label. Bayesian networks have been successfully applied to classification problems in many ways by inducing classifiers using different types of Bayesian network learning ...
Subtree Mining for Question Classification Problem
... process of rightmost extension, we always maintain the temporally suboptimal gain δ among all gains calculated previously. If μ(t) < delta , the gain of any super-tree t ∈ t is no greater than delta , and therefore we can safely prune the search space spanned from the subtree t. Otherwise, we can n ...
... process of rightmost extension, we always maintain the temporally suboptimal gain δ among all gains calculated previously. If μ(t) < delta , the gain of any super-tree t ∈ t is no greater than delta , and therefore we can safely prune the search space spanned from the subtree t. Otherwise, we can n ...
Self-Improving Algorithms Nir Ailon Bernard Chazelle Seshadhri Comandur
... distribution, the algorithm should be able to spot that and learn to be more efficient. The obvious analogy is data compression, which seeks to exploit low entropy to minimize encoding size. The analogue of Shannon’s noiseless coding theorem would be here: Given an unknown distribution D, design a s ...
... distribution, the algorithm should be able to spot that and learn to be more efficient. The obvious analogy is data compression, which seeks to exploit low entropy to minimize encoding size. The analogue of Shannon’s noiseless coding theorem would be here: Given an unknown distribution D, design a s ...
et al - International Journal of Systematic and Evolutionary
... these proteins was previously available from only a limited number of actinobacteria, whose genomes have been sequenced. One possible signature for actinobacteria, consisting of a large insert in the 23S rRNA, has previously been described (Roller et al., 1992). However, the validity and specificity ...
... these proteins was previously available from only a limited number of actinobacteria, whose genomes have been sequenced. One possible signature for actinobacteria, consisting of a large insert in the 23S rRNA, has previously been described (Roller et al., 1992). However, the validity and specificity ...
in silico PCR-RFLP of Bacillus species: a problem
... Lactic acid bacteria (LAB), albeit used as a loosely defined term, are referred to a related group of bacteria that share the property of producing lactic acid as the principal end-product from hexoses. Nevertheless, it is agreeable that LAB are Gram-positive, non-spore forming, catalase negative wh ...
... Lactic acid bacteria (LAB), albeit used as a loosely defined term, are referred to a related group of bacteria that share the property of producing lactic acid as the principal end-product from hexoses. Nevertheless, it is agreeable that LAB are Gram-positive, non-spore forming, catalase negative wh ...
Presentation
... • Initial stages of analyzing DNA sequence: – Find genes – Find and Analyze similar genes – Multialign like genes to find active sites ...
... • Initial stages of analyzing DNA sequence: – Find genes – Find and Analyze similar genes – Multialign like genes to find active sites ...
SEQUENTIAL LIMITS Sequential Limits Background : start with a
... Sequences and Difference Equations : • Problem: given a difference equation an+1 = f (an), find limn→∞ an. Note: if limit a exists, a is an equilibrium point, with a = f (a). Examples: a) f (x) = x/3, with a1 = 1; b) f (x) = x2, with a1 = .5, a1 = 1.5? ...
... Sequences and Difference Equations : • Problem: given a difference equation an+1 = f (an), find limn→∞ an. Note: if limit a exists, a is an equilibrium point, with a = f (a). Examples: a) f (x) = x/3, with a1 = 1; b) f (x) = x2, with a1 = .5, a1 = 1.5? ...
Mixture Models and EM
... • Uses to identify clusters in multidimensional space. • Aim: Partition the data set into some number K of clusters, where K is given. • Note: A cluster comprises of a group of data points whose inter-point distances are small compared with the distances to points outside of the cluster. Each cluste ...
... • Uses to identify clusters in multidimensional space. • Aim: Partition the data set into some number K of clusters, where K is given. • Note: A cluster comprises of a group of data points whose inter-point distances are small compared with the distances to points outside of the cluster. Each cluste ...
Bayesian Networks: Learning from Data
... Conclusion: as we need only a comparative measure, we need just the marginal likelihood. Assumptions: this scoring metric works under certain assumptions (complete data, symmetric Dirichlet distributions as priors). HST 951 ...
... Conclusion: as we need only a comparative measure, we need just the marginal likelihood. Assumptions: this scoring metric works under certain assumptions (complete data, symmetric Dirichlet distributions as priors). HST 951 ...
Fig 1 - Centre for Biodiversity Genomics
... be used to probe patterns of mitochondrial evolution. The present study examines levels of amino acid substitution and the frequency of indels in COI from 4177 species of arachnids, including representatives from all 16 orders and 43% of its families (267/625). It examines divergences at three taxon ...
... be used to probe patterns of mitochondrial evolution. The present study examines levels of amino acid substitution and the frequency of indels in COI from 4177 species of arachnids, including representatives from all 16 orders and 43% of its families (267/625). It examines divergences at three taxon ...
Multidimensional Access Methods: Important Factor for Current and
... Because of large volume of the spatial databases, it is typically not efficient to pre-compute and store spatial relationships among all data objects [OOI91]. They are dynamically constructed during the query processing instead. To efficiently support the search operators of spatial objects, an inde ...
... Because of large volume of the spatial databases, it is typically not efficient to pre-compute and store spatial relationships among all data objects [OOI91]. They are dynamically constructed during the query processing instead. To efficiently support the search operators of spatial objects, an inde ...
Direct Least Square Fitting of Ellipses
... (from 2- to 2 ) for 100 runs and the distance between the true ellipse center and the center of the conic returned by the fitting algorithm was recorded. Returned hyperbolae were included for the other algorithms. Fig. 2a shows the 90th percentile error in the centers as a function of noise level. A ...
... (from 2- to 2 ) for 100 runs and the distance between the true ellipse center and the center of the conic returned by the fitting algorithm was recorded. Returned hyperbolae were included for the other algorithms. Fig. 2a shows the 90th percentile error in the centers as a function of noise level. A ...
Artificial Intelligence
... that the search order of the nodes is determined by the estimated distance from a node to the goal node (depth first would choose the leftmost). When starting from the node S, the search sees the estimated distances from the nodes 2 (9) and 10 (8) and chooses the node 10 that is estimated to be clos ...
... that the search order of the nodes is determined by the estimated distance from a node to the goal node (depth first would choose the leftmost). When starting from the node S, the search sees the estimated distances from the nodes 2 (9) and 10 (8) and chooses the node 10 that is estimated to be clos ...
4 Exchangeability and conditional independence
... is said to be a Q × 100% Credible Interval. This is usually constructed simply by taking Q/2 o from both ends of the distribution. But this is not necessarily the shortest possible interval. The shortest Credible Interval is called Highest Posterior Density Interval (HPD-interval). The simple Credi ...
... is said to be a Q × 100% Credible Interval. This is usually constructed simply by taking Q/2 o from both ends of the distribution. But this is not necessarily the shortest possible interval. The shortest Credible Interval is called Highest Posterior Density Interval (HPD-interval). The simple Credi ...
