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Translation
Translation

... eukaryotes are larger than those of bacteria. • Total content of both RNA & protein is greater • Major RNA molecules are longer ...
Probing Essential Nucleobase Functional Groups in Aptamers and
Probing Essential Nucleobase Functional Groups in Aptamers and

... of a DNA catalyst in an active conformation is known.4 Although individual mutation, modification, or deletion variants of deoxyribozymes with short catalytic sequences have been studied,57 this approach becomes experimentally impractical for longer DNA sequences. Therefore, we introduce a combinato ...
Plant Virology
Plant Virology

... • Tomato bushy stunt virus is typical, wellstudied example • Each particle contains only a single molecule of RNA (4800 nt) and T= 3 Lattice 180 copies of the coat C protein subunit (387 aa; 41 kd) • Viruses similar to TBSV will self-assemble in N vitro from protein subunits + nucleic acid Protein S ...
X-Chromosome Inactivation: The Case of the Calico Cat1
X-Chromosome Inactivation: The Case of the Calico Cat1

... The Xist/XIST gene does not code for a protein; it is transcribed into RNA, but not an RNA like any other. This mammoth transcript (17 kb in humans) contains a large number of STOP codons, such that the longest open reading frame, which could potentially code for a protein, is only 400 base pairs lo ...
Engineering Learning in Unicellular Organisms
Engineering Learning in Unicellular Organisms

... as a whole should perform many of the functions commonly seen in neural networks. Thus, in aggregate, the signaling pathways of a cell are capable of recognizing sets of inputs and responding appropriately, with their connection "strengths" having been selected during ...
Multi-Volume Analysis of Nucleic Acids Using the Epoch
Multi-Volume Analysis of Nucleic Acids Using the Epoch

... Micro-volume cuvettes are available which allow analysis of samples in the microliter range with fixed pathlengths a fraction of that available with standard cuvettes. The main advantage of these micro-volume cuvettes is that nucleic acid samples do not have to be diluted to be accurately quantified ...
Animals and plants manage to make copies of themselves from one
Animals and plants manage to make copies of themselves from one

... been isolated and purified have been found to be made up of protein. For his work, Stanley won a share of the Nobel Prize for chemistry in 1948. Almost at once it was found that viruses contain more than protein. In 1937, an English biologist, Frederick Charles Bawden (1908- ) found that the tobacco ...
Determinants of  mRNA  localization University
Determinants of mRNA localization University

... Eukaryotic cells are highly organized to achieve a broad structural and functional diversity. How genetic information mediates different structures and compartmentalizes particular functions remains to be elucidated. Some of the information for cellular organization can be attributed to proteins by ...
Chapter 15
Chapter 15

... The Lac operon controls the production of the ß-galactosidase, an enzyme that catalyzes the hydrolysis (break-down) of lactose into glucose and galactose. This is an inducible operon, meaning gene expression ß-galactosidase is stimulated by the presence of an co-inducer, lactose. ...
Transcription
Transcription

... in DNA sequencing. It is used to identify the specific DNA sequences that are bound by a particular protein. ...
Chapters 16-17 (DNA and protein synthesis)
Chapters 16-17 (DNA and protein synthesis)

... Nucleic acids store and transmit genetic information - DNA is the genetic material that is inherited from one generation to the next and is reproduced in each cell of an organism - The instructions in DNA are “copied” to RNA, ribonucleic acid, which directs the synthesis of proteins - The sequence o ...
ESTs to genome
ESTs to genome

... Ule et al, Science 2003: 340 sequences ...
Bioinformatics (Warm Up + Cracking the Genetic Code)
Bioinformatics (Warm Up + Cracking the Genetic Code)

... Which parts code for proteins or enzymes? • Predict structure of RNA or proteins (and thus, determine their function). • Find out the differences between the genes of different species e.g. to reconstruct the evolutionary history of species based on genomic data or to determine “real” characters tha ...
XistAR write up
XistAR write up

... cells analyzed were from TS (trophoblast stem) and XEN (extra-embryonic endoderm) which both exhibit iXCI. To examine the involvement of XistAR in random inactivation, they examined antisense expression in EpiSC (epiblast stem cells). Since it is impossible to deduce allele-specific expression in ra ...
Prokaryote Gene Expression Section 1 Overview of RNA
Prokaryote Gene Expression Section 1 Overview of RNA

... tRNAs have common 3D structure All tRNAs have a common 3D fold  Bind to three sites on ribosomes, which fit this common 3D structure  Function to bind codons on mRNA bound to ribosome and bring amino acyl groups to the catalytic site on the ribosome  Ribosomes to not differentiate tRNA structure ...
a real-time quantitative polymerase chain reaction protocol for symb
a real-time quantitative polymerase chain reaction protocol for symb

... isolation using a high-salt precipitation step involving the addition of 250 μL of a salt solution (0.8 m Na citrate, 1.2 m NaCl) before the addition of 250 μL of isopropanol. The RNA was eluted in 30 μL DEPC-treated water. After the aqueous phase was removed from each sample and processed for RNA ( ...
Physicochemical studies on interactions between DNA and RNA
Physicochemical studies on interactions between DNA and RNA

... results on the unwinding of the DNA helix by Escherichia coli RNA polymerase. As measured by the difference in the average linking numbers of doublestranded phage fd DNA samples covalently closed in the presence and absence of E. coli RNA polymerase, the binding of a holoenzyme at 37°C in a dilute b ...
Chpt12_RNAProcessing.doc
Chpt12_RNAProcessing.doc

... over-expression or ectopic expression of a defined gene were the cause of some pathology (e.g. some form of cancer), then reducing its expression could have therapeutic value. Other RNAs possibly involved in catalysis, such as the snRNAs involved in splicing pre-mRNA (discussed in the next section). ...
pdf
pdf

... expression or ectopic expression of a defined gene were the cause of some pathology (e.g. some form of cancer), then reducing its expression could have therapeutic value. Other RNAs possibly involved in catalysis, such as the snRNAs involved in splicing pre-mRNA (discussed in the next section). Even ...
DNA/RNA Set - MIT Edgerton Center
DNA/RNA Set - MIT Edgerton Center

... A: The length of DNA needed to contain the information for building a protein (or another molecule like RNA) Q: What’s a chromosome? A: A chromosome is a long molecule of DNA. It is made up of many genes joined end to end. Different animals and plants have different numbers of chromosomes. Optional: ...
Polypeptide Synthesis -Making Proteins
Polypeptide Synthesis -Making Proteins

... about 80 nucleotides long ...
DNA/RNA Set - Edgerton Center
DNA/RNA Set - Edgerton Center

... A: The length of DNA needed to contain the information for building a protein (or another molecule like RNA) Q: What’s a chromosome? A: A chromosome is a long molecule of DNA. It is made up of many genes joined end to end. Different animals and plants have different numbers of chromosomes. Optional: ...
Microarray experiment guidelines
Microarray experiment guidelines

... genes, microarrays provide a large quantity of information about an organism/cell/tissue – whether it be mutational studies (monitoring the effects of gene expression by knocking out/in a particular gene), conditional (monitoring the effects on gene expression when presenting the organism/cell to a ...
Biology 1060 Chapter 17 - College of Southern Maryland
Biology 1060 Chapter 17 - College of Southern Maryland

... Discuss “inborn errors of metabolism” – Give examples ...
Structure and Transcription of the singed Locus of Drosophila
Structure and Transcription of the singed Locus of Drosophila

... were isolatedfrom adult female, embryonicand pupal cDNA libraries (POOLEet al. 1985). Initially, a probe from the proximal region of the gene (-2.7 to +5.7) was used. A total of 22 clones were isolated fromfour different libraries. Two of the cDNAs werefrom olj??, and 4 of the 20 sn cDNA inserts wer ...
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RNA world



The RNA world refers to the self-replicating ribonucleic acid (RNA) molecules that were precursors to all current life on Earth. It is generally accepted that current life on Earth descends from an RNA world, although RNA-based life may not have been the first life to exist.RNA stores genetic information like DNA, and catalyzes chemical reactions like an enzyme protein. It may, therefore, have played a major step in the evolution of cellular life. The RNA world would have eventually been replaced by the DNA, RNA and protein world of today, likely through an intermediate stage of ribonucleoprotein enzymes such as the ribosome and ribozymes, since proteins large enough to self-fold and have useful activities would only have come about after RNA was available to catalyze peptide ligation or amino acid polymerization. DNA is thought to have taken over the role of data storage due to its increased stability, while proteins, through a greater variety of monomers (amino acids), replaced RNA's role in specialized biocatalysis.The RNA world hypothesis is supported by many independent lines of evidence, such as the observations that RNA is central to the translation process and that small RNAs can catalyze all of the chemical group and information transfers required for life. The structure of the ribosome has been called the ""smoking gun,"" as it showed that the ribosome is a ribozyme, with a central core of RNA and no amino acid side chains within 18 angstroms of the active site where peptide bond formation is catalyzed. Many of the most critical components of cells (those that evolve the slowest) are composed mostly or entirely of RNA. Also, many critical cofactors (ATP, Acetyl-CoA, NADH, etc.) are either nucleotides or substances clearly related to them. This would mean that the RNA and nucleotide cofactors in modern cells are an evolutionary remnant of an RNA-based enzymatic system that preceded the protein-based one seen in all extant life.Evidence suggests chemical conditions (including the presence of boron, molybdenum and oxygen) for initially producing RNA molecules may have been better on the planet Mars than those on the planet Earth. If so, life-suitable molecules, originating on Mars, may have later migrated to Earth via panspermia or similar process.
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